Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach2g01722 GGAAAAGAAAAAACCGAACCAGCTGCTGACTCCACACGACTTCTGCTCTGACTCAACGGCAACGGCTACGACGAAACGCTCAACACTGAGCCACCTCTACGCTACTTCCATTTACTTCTAAATCAAATTGAAAAGGACAAAGCTAGATACAAACTCCTCTTCACACGCAATCGTGGAATCCTCGTACACTCTGGTAACGCACGAGGTGCTGGTACCTAAGAACCGAAAGCCTCAATAACCCGTGGGGTTAACCGCAATGCCGGACGGGGAAGTCTCCGACAGGTCCGATTTTCCGGCCGCCGGCTTTGGGGAGCTCTCTTTCGCATCCTCACCGATCGCAGAGCCATCTTCAAGTCACTCTGAAGTAAATGATCAGGTGGAATCGGTTTCGGGAGTTCAAAATGCAAAGAAGGATCCGAGAAAAATAGCTAGAAAGTATCAATTGGAGTTGTGCAGAAAAGCTATGGAGGAAAATATAATTGTGTATTTGGGGACTGGTTGTGGAAAGACCCACATCGCGGTACTGCTTATGTATGAGATGAGTCACTTGATACGGAAGCCCCAGAAGAAAGTATGTGTTTTTCTCGCCCCTACAGTGGCTTTAGTTCACCAGCAAGCGAAGGTCATAGAAGACTCTACTGATTTCAAGGTAGGAGTTTACTGTGGGAGCTCTAGGCGCTTGAAAAGTCATCTTGATTGGGAGAAAGAGATTGAACAATACGAGGTTCTTGTTATGACCCCTCAGATACTAAATCTCAACTTATCTCACTGTTTCATCAAGATGGAGATGATTGTGCTTTTAATATTTGATGAATGCCATCATGCTCAAGTCAAAAGCAACCATCCTTATGCAGAAATCATGAAAGTCTTCTATAAAACAAGTTCTGCAAAGCTCCCCCGAATATTTGGCATGACTGCTTCCCCAGTTGTAGGAAAAGGTGCTTCTAGTGAAAGAAACCTAGCAAAAAGCATCAATAGTCTTGAAGATATGCTTGATGCTAAGGTATACTCAGTTGAAGACAAGGAGGAGTTGGATAATTTTGTGGCCTCTCCTGTGGTTACAATACATGATTATGGTCCTACTGCAAATGGCACAACTAGTTCATACACAACTTACTATACGAAACTTGCAGAAATTAAGCAGCAGTGTATAGCAACCCTTAGTAAGAGTACTGAAGATCACCAGAAAAGAAGAAACACCAAGAAACTTCTGAATCGAATGCATGAAAATGTGGTTTTCTGTCTGGAGAATCTTGGCATCTGGGGAGCACTGCAAGCTAGTCATATTCTTTTGAGTGGTGATCACTCTGAGAGGAATGAATTAGTGGAGGCAGAAGAAAATGCAAGTGATGACTCTTTGTGTGATAAGTATGTGGCTCAGGCAGCTGAATTCCTTACTTCTGAATGCAAGAAAGATCATGGTGTATCCGATCCATCTTCAGTGGAAATCTTAGAAGAGCCATTTTTTTCAAGAAAGCTTTTACGCCTTATTGGGATACTGTCCTCGTTTAGGTCACGACCAAATATGAAATGTATAGTTTTTGTAAATAGAATTGTTACTGCAAGATCTTTGTCAAACATGCTAAAAAAGCTTAAGTTGCTTTCATCATGGAAGACTGATTTTCTAGTAGGAGTCCATTCTGGGCTGAAGAGTATGTCACGGAAGACCATGAACATCATTCTTGAAAAGTTCCGTTCTGGGGAGCTGAATCTATTGGTTGCAACCAAAGTGGGTGAGGAAGGACTTGACATTCAGACATGTTGTCTTGTTATACGATTTGATCTTCCAGAAACTGTTGCAAGCTTTATACAGTCAAGAGGTCGTGCACGTATGCCTCAGTCAGAATATGCATTTTTGGTGGATAGTGGCAATCAGAAGGATCTAGATTTAATTGAAAATTTCAAAAAAGATGAAAAGCGAATGAACTCAGAAATTGTTGTCCGCACATCTGATGAGAAATTTATCACTCGTGAGGAAAGAATATTCAAGTTGGCGTCATCTGGTGCTTCTGTCAGTTCTGCATATAGTATCTCATTGCTTCACCAGTATTGTTCCAAGCTTCCGCATGATGAGTACTTTGATCCGAAGCCAAAATTTTTCTATTTTGATGATTTAGGGGGAACTGTTTGCCACATAATCTTACCTGCCAATGCCTCAATACGTCAAATTGTCAGTAGGTCACAATGTTCTATAGATGCTGCTAAAAAAGATGCTTGTCTGAAAGCAATCGAAGAATTGCATAAATTAGGTGCCCTAAATGATTCTCTTCTGCCAAAGCAAGATGATGCTAACCTGGAGGAGCATGCTTTGGTGTTTTCTGTTTCAGATGAAAGCAAAGATGACAATTCACGAGGAGAACTACGTGAGATGTTAGTTCCTTCTGCCTTTAGGCAAGGATGGACAAACAAGGGAAAAATTGTTCATCTTAACTCTTACTACATAAAATTTGCTCCCATTCCAGAAGATAGGATCTATAAAAAATTTGGTCTATTCATCATGACACATCTTCCAATAGAGGCTGAGAAACTGGAGCTTGATCTTCATCTTGCTCGTGGTAGATCTGTGATGACAAAATTAGTTCCATTTGGAGTTACTGAATTTGACAATGACGAGATTAAGACAGCACAGCTTTTTCAGGAAATGTTCCTCAAAATTATTCTTGATCGTTCAGAATTTGTTCCTGAATATGTACCCTTGGGAAAGGATGGATTATTTCAAAAATGCACTAGCACCTCAACCTTCTTCCTTTTGCTTCCAGTCAATTTGCAAGACAATGAAAATGCTATGTCAATAGATTGGAAAAGTATGAGGAGATGCCTTTCTTCGCCAATCTTTAGGCATCCAGCAGATACTGTAGATATGGAAACTTCACCTTCAAATATTCATCTGCAACTTGCTAATGGTTACAGAAGTGTAAGAGATATTGAAAATAGTTTAGTGTATGTTCAACATAAGAAGGCGTTTTATTTTGTCACTAATGTCATCCATGAAAAGAATGGACTCAGTCCTTATGGAACATCAGGCAGTTCAAGCTACATGGATCACTTTATTCAAAAGTTTTCCATTCATCTTGAATACCCTCACCAACCCCTCCTCCATGCTAAACCACTCTTCAATCTGCACAACTTACTTCACAATCGAAGGCATAAGGATACAGAAGCACATGAGTCGGAGGAATATTTCATTGATTTGCCTCCTGAGCTTTGTCAATTGAAAATAATGGGCTTTTCAAAAGATATTGGCAGTTCCCTATCTTTGTTACCGTCAATCATGCATCGTCTTGGAAACTTGCTGGTGGCAATTGAACTCAAAAATATGCTTTCTTCATTCTTCCCAGAGGCAGCTAGGATTAGTGCCCTCAGAGTTCTAGAGGCAATCACCACAGAAAATTGCCAGGAGCGTTTTTCCCTTGAAAGGCTTGAAGTGCTTGGTGATGCTTTCCTCAAATTTGCTGCGGCACGCCATTTTTTTCTCAAGCATGATAACCTTGATGAAGGAGGCCTTACAAGAAGGCGTTCAAATATTGTAGATAATTCCAATTTATATAAGTTAGCGATCAAGCACAATTTGCAGGTATACATTCGTGATCAGGCATTTGATCCCTGTCAGTTCTTTGCATTAGGCCGTCCTTGCCCTAGAGTTTGTACCAAGGAAACTGAAAAAAGTATTCATTCATGTTTAAATTCTGCTATAGATGAGGGAAGTGCAACTGAAGTTCCATGCAGTAAAAATCACCACTGGTTGCGTAGGAAAACAGTTGCTGATGTGGTTGAAGCTCTTGTTGGAGCCCTCATAGTTGACAGTGGTTTCAAAGCTGCAACTGCATTTCTTACTTGGATTGGCATAAAAATTGATTTTGCAGCCTCACAAGTGATCAAGGTTTGCACAGAAAGTACTAGTTACATCCCTCTTTCTGCTCATGTGGATGTTCCTTCCCTTGAAGATTGTCTAGGATATCACTTTCTGCACAAGGGTTTGCTTCTTCAGGCATTCATACACCCTTCTTACAGTAAACATGGAGGAGGCTGCTATCAGAGATTGGAATTTCTTGGAGATGCTGTCTTGGATTACTTGATTACTTCATACCTCTACTCAACTTATCCAACACTAAAGCCTGGTCAATTAACAGATTTGAGATCTGTGTCTGTGAACAATAAGGCATTTGCACAGGTGGCAGTGGATCGAAAAATTGATAAATTTCTTTTATGTGATTCAAGTACGCTGTCTGAAGCAATAAAAAAGTATGCAGATTACATCAGAAAACCTGATTTGCGTGGGGACATTTCTGAAGAGCCAAAGTGTCCAAAGGCATTGGGTGACTTGGTGGAATCTTGTATTGGCGCCATTCTCCTTGACTCAGGGTTCAATTTGAACAGCGTTTGGGAGATTATGACTTCGTTCTTGGATCCAATTATGAAATTCACATGCTTGCAACTTAGTCCTATTAGGGATTTGCGAGAACTTTGCCAATCCCATAATTTGGATTTAAAATTCTTGCCACGTAAAACTATCAGAGTATTTTCAGTTGAAGCCATAGTAACTGGAAATGATATATCAGCAACCGCTTCAGTAACCAGGCTAAACCAAAAAGAAGCTAAAAGAATTTCTTCACAGCTAGTACTTTCACAATTAAAGGCTCAAGGTTTCATACCAAAGTCAAAATCTTTGGAGGAAGTTCTTAAATCAAGCTCGAAGATGGAAGCCAAACTTATTGGCTATGATGAAATACCCATTGATGTAACAGCCATCAATACCAATGGGACCGTAATAGTTAAGCAAAATCCATGCAGGAATTTTAACCGAGCAATTCGTCCTATTCGTGAGGTACTTAATATATGCTCCCCGTGTGCGCTACCTGCCAATCAACGGCCTCAATCTTCATTTGGAACAATTGAGGAGCAGCTTGATGAGGACTTTAAAAATCACGATCATGACATGGACCCAGAAAGGACAGGTTGTTCGGACAAAAGAACAGCAAGGTCTCGATTGTATGAATTCTGTGCTGCTAATTGCTGGAAACCTCCTTCATTCGAATGCTGTAAAGAGGAAGGACCAAGCCACCTGAAGTTATTTACTTTTAAGGTGACATTGGAGATAGAAGAGGCAGCAGATATGGTTCTAGAATGTGTTGGGGAAGCTCAAGCAAAGAAGAAAGACGCAGCAGAAAGTGCAGCTGAGGGTGCGTTATGGTACTTGCAACATGTATACCTGCTCAATGGTAATTGA 5227 0.4062 MPDGEVSDRSDFPAAGFGELSFASSPIAEPSSSHSEVNDQVESVSGVQNAKKDPRKIARKYQLELCRKAMEENIIVYLGTGCGKTHIAVLLMYEMSHLIRKPQKKVCVFLAPTVALVHQQAKVIEDSTDFKVGVYCGSSRRLKSHLDWEKEIEQYEVLVMTPQILNLNLSHCFIKMEMIVLLIFDECHHAQVKSNHPYAEIMKVFYKTSSAKLPRIFGMTASPVVGKGASSERNLAKSINSLEDMLDAKVYSVEDKEELDNFVASPVVTIHDYGPTANGTTSSYTTYYTKLAEIKQQCIATLSKSTEDHQKRRNTKKLLNRMHENVVFCLENLGIWGALQASHILLSGDHSERNELVEAEENASDDSLCDKYVAQAAEFLTSECKKDHGVSDPSSVEILEEPFFSRKLLRLIGILSSFRSRPNMKCIVFVNRIVTARSLSNMLKKLKLLSSWKTDFLVGVHSGLKSMSRKTMNIILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQKDLDLIENFKKDEKRMNSEIVVRTSDEKFITREERIFKLASSGASVSSAYSISLLHQYCSKLPHDEYFDPKPKFFYFDDLGGTVCHIILPANASIRQIVSRSQCSIDAAKKDACLKAIEELHKLGALNDSLLPKQDDANLEEHALVFSVSDESKDDNSRGELREMLVPSAFRQGWTNKGKIVHLNSYYIKFAPIPEDRIYKKFGLFIMTHLPIEAEKLELDLHLARGRSVMTKLVPFGVTEFDNDEIKTAQLFQEMFLKIILDRSEFVPEYVPLGKDGLFQKCTSTSTFFLLLPVNLQDNENAMSIDWKSMRRCLSSPIFRHPADTVDMETSPSNIHLQLANGYRSVRDIENSLVYVQHKKAFYFVTNVIHEKNGLSPYGTSGSSSYMDHFIQKFSIHLEYPHQPLLHAKPLFNLHNLLHNRRHKDTEAHESEEYFIDLPPELCQLKIMGFSKDIGSSLSLLPSIMHRLGNLLVAIELKNMLSSFFPEAARISALRVLEAITTENCQERFSLERLEVLGDAFLKFAAARHFFLKHDNLDEGGLTRRRSNIVDNSNLYKLAIKHNLQVYIRDQAFDPCQFFALGRPCPRVCTKETEKSIHSCLNSAIDEGSATEVPCSKNHHWLRRKTVADVVEALVGALIVDSGFKAATAFLTWIGIKIDFAASQVIKVCTESTSYIPLSAHVDVPSLEDCLGYHFLHKGLLLQAFIHPSYSKHGGGCYQRLEFLGDAVLDYLITSYLYSTYPTLKPGQLTDLRSVSVNNKAFAQVAVDRKIDKFLLCDSSTLSEAIKKYADYIRKPDLRGDISEEPKCPKALGDLVESCIGAILLDSGFNLNSVWEIMTSFLDPIMKFTCLQLSPIRDLRELCQSHNLDLKFLPRKTIRVFSVEAIVTGNDISATASVTRLNQKEAKRISSQLVLSQLKAQGFIPKSKSLEEVLKSSSKMEAKLIGYDEIPIDVTAINTNGTVIVKQNPCRNFNRAIRPIREVLNICSPCALPANQRPQSSFGTIEEQLDEDFKNHDHDMDPERTGCSDKRTARSRLYEFCAANCWKPPSFECCKEEGPSHLKLFTFKVTLEIEEAADMVLECVGEAQAKKKDAAESAAEGALWYLQHVYLLNGN 1656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach2g01722 1656 CDD SF2_C_dicer 400 535 - -
Bach2g01722 1656 ProSiteProfiles Ribonuclease III family domain profile. 1225 1369 IPR000999 GO:0004525|GO:0006396
Bach2g01722 1656 Pfam Helicase conserved C-terminal domain 410 525 IPR001650 -
Bach2g01722 1656 FunFam Endoribonuclease dicer-like 1 586 682 - -
Bach2g01722 1656 Pfam Type III restriction enzyme, res subunit 68 223 IPR006935 GO:0003677|GO:0005524|GO:0016787
Bach2g01722 1656 CDD DSRM_DCL_plant 1580 1649 - -
Bach2g01722 1656 ProSiteProfiles Dicer double-stranded RNA-binding fold domain profile. 591 681 IPR005034 GO:0016891
Bach2g01722 1656 SMART helicmild6 437 527 IPR001650 -
Bach2g01722 1656 SMART ultradead3 54 259 IPR014001 -
Bach2g01722 1656 SUPERFAMILY dsRNA-binding domain-like 1573 1650 - -
Bach2g01722 1656 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 65 241 IPR014001 -
Bach2g01722 1656 MobiDBLite consensus disorder prediction 24 49 - -
Bach2g01722 1656 FunFam Endoribonuclease dicer-like protein 53 295 - -
Bach2g01722 1656 Pfam double strand RNA binding domain from DEAD END PROTEIN 1 1573 1648 - -
Bach2g01722 1656 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 407 568 IPR001650 -
Bach2g01722 1656 FunFam Endoribonuclease dicer-like 1 398 561 - -
Bach2g01722 1656 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 104 542 IPR027417 -
Bach2g01722 1656 SUPERFAMILY PAZ domain 884 986 IPR036085 GO:0005515
Bach2g01722 1656 Gene3D Dicer dimerisation domain 587 682 IPR038248 -
Bach2g01722 1656 Gene3D - 400 563 IPR027417 -
Bach2g01722 1656 Gene3D paz domain 882 986 - -
Bach2g01722 1656 MobiDBLite consensus disorder prediction 25 47 - -
Bach2g01722 1656 SMART DRBM_3 1574 1648 IPR014720 -
Bach2g01722 1656 SMART DRBM_3 1396 1460 IPR014720 -
Bach2g01722 1656 PANTHER DICER-RELATED 71 1463 - -
Bach2g01722 1656 Pfam Ribonuclease III domain 1053 1184 IPR000999 GO:0004525|GO:0006396
Bach2g01722 1656 Pfam Ribonuclease III domain 1260 1369 IPR000999 GO:0004525|GO:0006396
Bach2g01722 1656 Gene3D - 58 324 IPR027417 -
Bach2g01722 1656 SMART PAZ_2_a_3 865 1014 IPR003100 GO:0005515
Bach2g01722 1656 Gene3D - 1580 1649 - -
Bach2g01722 1656 ProSiteProfiles Double stranded RNA-binding domain (dsRBD) profile. 1573 1649 IPR014720 -
Bach2g01722 1656 CDD DEXHc_dicer 56 255 - -
Bach2g01722 1656 SUPERFAMILY dsRNA-binding domain-like 1351 1460 - -
Bach2g01722 1656 CDD RIBOc 1241 1392 IPR000999 GO:0004525|GO:0006396
Bach2g01722 1656 Gene3D Ribonuclease III domain 1033 1196 IPR036389 GO:0004525|GO:0006396
Bach2g01722 1656 Gene3D Ribonuclease III domain 1220 1392 IPR036389 GO:0004525|GO:0006396
Bach2g01722 1656 FunFam Endoribonuclease dicer-like 1 1219 1390 - -
Bach2g01722 1656 SMART riboneu5 1240 1392 IPR000999 GO:0004525|GO:0006396
Bach2g01722 1656 SMART riboneu5 1037 1204 IPR000999 GO:0004525|GO:0006396
Bach2g01722 1656 SUPERFAMILY RNase III domain-like 1225 1389 IPR036389 GO:0004525|GO:0006396
Bach2g01722 1656 ProSitePatterns Ribonuclease III family signature. 1260 1268 IPR000999 GO:0004525|GO:0006396
Bach2g01722 1656 Pfam PAZ domain 888 1009 IPR003100 GO:0005515
Bach2g01722 1656 CDD RIBOc 1038 1202 IPR000999 GO:0004525|GO:0006396
Bach2g01722 1656 ProSiteProfiles Ribonuclease III family domain profile. 1039 1184 IPR000999 GO:0004525|GO:0006396
Bach2g01722 1656 Pfam Dicer dimerisation domain 591 676 - -
Bach2g01722 1656 SUPERFAMILY RNase III domain-like 1037 1198 IPR036389 GO:0004525|GO:0006396
Bach2g01722 1656 ProSiteProfiles PAZ domain profile. 888 988 IPR003100 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach2g01722 Bach-Chr2 25669640 25684664 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach2g01722 425 524 Eukaryotic Initiation Factors Gene Family AT1G72730 31.000 1.96e-06 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach2g01722 K11592 - gmx:100797277 2273.05