Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bach2g01721 | ATGTCAGGGTGGGACGAGGGGGCCGTCTACTACAGCGACCAAGCTCACTCATGGGATGACGGCACCGGCCGTGGTGCGGAAACCGAAGGCACCCTATCCAACCACACCATCCTCCAGAAATTCAAGGAATTCATCCGAAACTTTGAGACTGAGAAGAATGTATTCCCTTACAGAGAAAGTCTTATCCATAATCCCAAGCATCTTCTCATCGACATGGAAGATCTAGACGCCTTCGATGCCGATTTGCCTGCCAAACTCCGTTCTGCCCCCGCCGATTACTTGCCCCTGTTTGAGATGGCGGCAGCGCAGGTTTTGGTGAGTTTGAAGACCAAAGTGGCCGGGGATACTGGGGTTATGGAGGAACCTGTAACCGGAGATGTTCAGATTTTACTCACTTCCAAGGAGGATCCGGTGTCAATGAGATTCCTCGGGGCTCAATATGTATCAAAGCTTGTCAAAATAGCAGGGATTACAATTGCTGCTTCAAGGACTAAGGCAAAGGCAACTTATGTCAACTTAATATGTAAGAACTGCAAAAAGGGGAGGCAAGTACCATGTCGTCCAGGACTGGGCGGGGCTGTTGTTCCTCGTTCATGTGACCATGTTCCTCAGGCTGGAGAAGAACCTTGCCCTATTGATCCATGGCTTGTGGTTCCTGATAAGAGCAAGTATGTTGATCAACAAACCTTGAAACTACAAGAAAACCCCGAGGATGTTCCAACCGGGGAGCTTCCTAGAAACATGCTTCTCTCTGTTGATCGCCATCTTGTTCAAACAGTTGTGCCTGGCTCAAGATTGACAATCATAGGAATCTATAGCATCTACCAAGCTTCTAATTCTTCTACATCGCACAAAGGAGCAGTAGCAATTAGGCAGCCTTATATCAGGGTTGTAGGAATAGAAGAAGCAAATGAGGCCAACTCTCGGGGTCCAGCTGCATTTACACCTGAGGAGATAGAAGAATTTAAAAAAATTTCTGCTGAACCAGATGCATACAAAAATATATGCTCGAAGATAGCTCCCTCTATATTTGGGCATGATGACGTTAAAAAGGCTGTGGCTTGTCTTTTGTTTGGAGGGTCAAGAAAGAATTTGCCAGATGGAGTGAAGTTAAGAGGTGATATCAATGTGTTGCTTCTTGGGGATCCATCTACTGCAAAGTCACAGTTTCTCAAATTTGTTGAAAAGACAGCTCCAGTTGCTGTTTATACTTCGGGTAAAGGCTCTTCGGCTGCTGGTCTCACAGCTTCTGTGATCCGAGATAGCAGTACTCGTGAGTTTTATCTTGAAGGAGGGGCCATGGTCTTGGCAGATGGAGGTGTTGTCTGCATTGACGAGTTTGATAAAATGAGACCAGAAGACAGGGTTGCTATTCATGAAGCCATGGAACAGCAAACAATATCCATAGCCAAAGCAGGAATAACAACTGTTCTTAATTCAAGAACTTCTGTGCTTGCTGCTGCTAACCCTCCATCAGGACGTTATGATGATCTTAAGACTGCTCAGGATAACATTGATTTGCAGACAACGATTCTTTCTAGGTTTGATTTAATCTTTATTGTGAAGGACATCAGAATGTATAGTCAAGACAAGGTCATAGCTAGTCATATCATAAAGGTTCATGCATCAGCTGATGCAACCGTGGGTGAGAGTAGAGCTTCTAAAGAAGAAAGCTGGTTGAAGAGGTACATACAATATTGTCGAACTGAATGCCACCCTCGTCTATCAGAACCTGCGGCAACGTTACTACAGAATAATTATGTTAAAATCAGACAGGATATGAGGCAACAGGCAAATGAAACTGGGGAAGCTGCTGCTATACCCATTACTGTAAGGCAGTTGGAAGCTATCATTAGGTTGAGTGAGGCACTTGCAAAGATGAAACTATCTCATCTTGCCACCGAGGAGAATGTGCAAGAAGCAATAAGGCTTTTCACAGTTTCCACAATGGATGCAGCTAAGTCTGGAATAAACCAACAAGTAAATCTTACACCTGAAATGGCCAATGAAATAAAGCAGCAAGCTGAAACCCAGATAAAGAGAAGAGTTGGGATTGGGAACCACATATCGGAAAGAAGGCTGATTGATGATCTCAGCAGAATGGGAATGAATGAATCAATTGTGAGAAGAGCTCTCTTAATCATGCATCAGAGAGACGAAGTGGAATACAAACGAGAAAGACGAGTTATATTACGGAAAGCATGA | 2205 | 0.4431 | MSGWDEGAVYYSDQAHSWDDGTGRGAETEGTLSNHTILQKFKEFIRNFETEKNVFPYRESLIHNPKHLLIDMEDLDAFDADLPAKLRSAPADYLPLFEMAAAQVLVSLKTKVAGDTGVMEEPVTGDVQILLTSKEDPVSMRFLGAQYVSKLVKIAGITIAASRTKAKATYVNLICKNCKKGRQVPCRPGLGGAVVPRSCDHVPQAGEEPCPIDPWLVVPDKSKYVDQQTLKLQENPEDVPTGELPRNMLLSVDRHLVQTVVPGSRLTIIGIYSIYQASNSSTSHKGAVAIRQPYIRVVGIEEANEANSRGPAAFTPEEIEEFKKISAEPDAYKNICSKIAPSIFGHDDVKKAVACLLFGGSRKNLPDGVKLRGDINVLLLGDPSTAKSQFLKFVEKTAPVAVYTSGKGSSAAGLTASVIRDSSTREFYLEGGAMVLADGGVVCIDEFDKMRPEDRVAIHEAMEQQTISIAKAGITTVLNSRTSVLAAANPPSGRYDDLKTAQDNIDLQTTILSRFDLIFIVKDIRMYSQDKVIASHIIKVHASADATVGESRASKEESWLKRYIQYCRTECHPRLSEPAATLLQNNYVKIRQDMRQQANETGEAAAIPITVRQLEAIIRLSEALAKMKLSHLATEENVQEAIRLFTVSTMDAAKSGINQQVNLTPEMANEIKQQAETQIKRRVGIGNHISERRLIDDLSRMGMNESIVRRALLIMHQRDEVEYKRERRVILRKA | 734 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bach2g01721 | 734 | Pfam | MCM AAA-lid domain | 560 | 648 | IPR041562 | - | |
| Bach2g01721 | 734 | PRINTS | Mini-chromosome maintenance (MCM) protein 5 signature | 643 | 660 | IPR008048 | GO:0003688|GO:0005524|GO:0005634|GO:0006270|GO:0042555 | |
| Bach2g01721 | 734 | PRINTS | Mini-chromosome maintenance (MCM) protein 5 signature | 291 | 303 | IPR008048 | GO:0003688|GO:0005524|GO:0005634|GO:0006270|GO:0042555 | |
| Bach2g01721 | 734 | PRINTS | Mini-chromosome maintenance (MCM) protein 5 signature | 167 | 179 | IPR008048 | GO:0003688|GO:0005524|GO:0005634|GO:0006270|GO:0042555 | |
| Bach2g01721 | 734 | PRINTS | Mini-chromosome maintenance (MCM) protein 5 signature | 141 | 156 | IPR008048 | GO:0003688|GO:0005524|GO:0005634|GO:0006270|GO:0042555 | |
| Bach2g01721 | 734 | PRINTS | Mini-chromosome maintenance (MCM) protein 5 signature | 567 | 582 | IPR008048 | GO:0003688|GO:0005524|GO:0005634|GO:0006270|GO:0042555 | |
| Bach2g01721 | 734 | PANTHER | DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER | 34 | 691 | IPR031327 | GO:0003677|GO:0005524|GO:0032508 | |
| Bach2g01721 | 734 | ProSiteProfiles | MCM family domain profile. | 331 | 537 | IPR001208 | GO:0003677|GO:0005524|GO:0032508 | |
| Bach2g01721 | 734 | FunFam | DNA helicase | 312 | 663 | - | - | |
| Bach2g01721 | 734 | Pfam | MCM P-loop domain | 319 | 541 | IPR001208 | GO:0003677|GO:0005524|GO:0032508 | |
| Bach2g01721 | 734 | Gene3D | - | 167 | 225 | - | - | |
| Bach2g01721 | 734 | FunFam | DNA helicase | 32 | 120 | - | - | |
| Bach2g01721 | 734 | Pfam | MCM OB domain | 140 | 275 | IPR033762 | - | |
| Bach2g01721 | 734 | Gene3D | - | 32 | 118 | - | - | |
| Bach2g01721 | 734 | SMART | mcm | 136 | 650 | IPR031327 | GO:0003677|GO:0005524|GO:0032508 | |
| Bach2g01721 | 734 | FunFam | DNA helicase | 167 | 225 | - | - | |
| Bach2g01721 | 734 | ProSitePatterns | MCM family signature. | 440 | 448 | IPR018525 | GO:0003677|GO:0005524|GO:0006260 | |
| Bach2g01721 | 734 | Gene3D | - | 140 | 275 | IPR012340 | - | |
| Bach2g01721 | 734 | Gene3D | - | 312 | 668 | IPR027417 | - | |
| Bach2g01721 | 734 | PRINTS | Mini-chromosome maintenance (MCM) protein family signature | 484 | 496 | IPR001208 | GO:0003677|GO:0005524|GO:0032508 | |
| Bach2g01721 | 734 | PRINTS | Mini-chromosome maintenance (MCM) protein family signature | 460 | 473 | IPR001208 | GO:0003677|GO:0005524|GO:0032508 | |
| Bach2g01721 | 734 | PRINTS | Mini-chromosome maintenance (MCM) protein family signature | 372 | 387 | IPR001208 | GO:0003677|GO:0005524|GO:0032508 | |
| Bach2g01721 | 734 | PRINTS | Mini-chromosome maintenance (MCM) protein family signature | 511 | 519 | IPR001208 | GO:0003677|GO:0005524|GO:0032508 | |
| Bach2g01721 | 734 | PRINTS | Mini-chromosome maintenance (MCM) protein family signature | 432 | 446 | IPR001208 | GO:0003677|GO:0005524|GO:0032508 | |
| Bach2g01721 | 734 | Pfam | MCM N-terminal domain | 39 | 110 | IPR027925 | - | |
| Bach2g01721 | 734 | SUPERFAMILY | Nucleic acid-binding proteins | 40 | 297 | IPR012340 | - | |
| Bach2g01721 | 734 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 341 | 649 | IPR027417 | - | |
| Bach2g01721 | 734 | CDD | MCM5 | 334 | 648 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Bach2g01721 | Bach-Chr2 | 25662479 | 25667774 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Bach2g01721 | 1 | 734 | Core DNA Replication Machinery Family | AT2G07690 | 78.883 | 0.0 | 1208 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bach2g01721 | K02209 | - | qsa:O6P43_003024 | 1335.47 |