Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach2g01669 ATGGAAGCTAGTAGTGGACTTTTTACAGGGACTCATGATGGTAATGAGCTTTTGGTCATCGAAGGACACGAAGAGCCAAAGCCTGTGAAGAACTTAGATGGGCAGCTCTGTGAGATATGTGGTGACACAGTGGGACTTACAGTGGATGGAGATTTATTCGTGGCTTGTGAAGAATGCGGTTTCCCAGTGTGCAGGCCATGCTATGAGTATGAGAGGAGGGAAGGGACCCAAGTTTGCCCTCAGTGCCAGACAAGATACAAGCGTATCAAAGGAAGCCCGAGAGTGGAAGGAGATGAGGATGAAGATGATGTGGATGATATTGAACAAGAATTTAAAATGCTGCAAGGGAAGATGAGTTATGGAGAAGATGATGAGAATGCTAAATCACCATCACTAGTTATAGCGAAGGTGAATGGAGAGCTGCCAATTGGAGAATCTGCAAGTGCGACATGGGATGAAAAGGATAAAGAGAGAATAGATGACTGGAAGTTGAATCAAGGCAATCTGTGGCCTGAAACAGACGCCTCCACGGACCCTGAAAAAGCCATGAGAGATGAAGCTAGACAGCCACTCTCTAGGAAAGTAGCAATACCATCAGGGAGACTCAGTCCTTATAGAATGATGGTTGGTGCTCGGCTTATCCTCACAGTGTTATTCATTCAGTACAGAGTGTTGCACCCAGTGCCCGAAGCCATTGGACTCTGGCTGATATCAGTAGCATGTGAAATCTGGCTTGCACTCTCATGGATGCTTGATCAGCTTCCCAAATGGTTTCCCACTGATCGCGAGACATACCTTGATCGGCTTTCAATCAGGTATGAACCGGAGGATAAGCCCAATTTACTTTCTCCAATAGATGTCTTTGTCACTACTGTGGATCCAATCAAGGAGCCTCCTTTAGTTACAGCCAACACAGTTCTTTCAATCTTGGCCATGGATTACCCTGCTGACCGAATCGCATGCTATGTTTCTGATGATGGAGCTTCCATGCTCACATTTGAAGCTCTTCAAGAAACTGCTGACTTTGCACGCAAGTGGGTTCCTTTCTGCAAAAAATATTCTACAGAGCCTCGAGCACCAGAGAAGTACTTCTCTGAGAAGATTGATTTTCTCAAGGATAAGGTCCAGCCAACATATGTAAAAGAACGGCGAACTATGAAGAGAGAATATGAAGAATTTAAGGTTAGAATAAATGCACTGGTGGCTAGATCCATGAGAGTTCCCCAGGAAGGGTGGACCATGAAGGATGGGACACCATGGCCAGGAAACAATACCAGAGATCATCCTGGTATGATACAAGTCCTTCTTGCTCAGAGTGGAGGACCTGAATCTGATGCTGCAGGAAATGAGCTTCCCGGTCTTGTCTACGTGTCTCGCGAAAAAAGGCCCGGATTTCCACACCACAGCAAAGCTGGCGCCCTGAATGCCTTGCTTCGCGTATCTGCAGTGCTAAGCAATGCCCCTTTTGTACTGAATTTGGATTGCAATCATTATGTGAATAATAGCAAGGCTGTCAGAGAGGCCACGTGTTTCTTCATGGAACAGCAAACTGGGAAGAGCATTAGCTTTGTCCAATTCCCAATACGATTCGATGGGCTTGATACGCATGATCGTTATGCCAACAGAAACACAGTTTTATTTGATATTAAATTGAGGTGTGAAGATGGAATTCAGGGACCTGCTTATGTTGGTTCAGCATGTATCTTCAGAAGGAAAGCTTTATATGGCTGTGATCCTCCTAAGGTTTCAAAGCGCCCAAAAATGGTAGGCTGTGACTGCTGTCCATGTTTTGGAGTTCGCAGGAAGCTACAAGTGCATTCTAAGCATGATGGAAATGGAGATGAAGCAACCATAACAGGGAAGTCTGCAATCTTTGTGAACTCTACCTTAGATGAACAAGGTGACATTCCTTCATCCTCAAGTCTGGCAGCTCTGCTTAAAGAAGCCATTCATGTTATGAGTAGTAGCTATGAAGATAGAACTCCCTGGGGAAAGGAGGTAGGTTGGAGCTATGGATCTATAGCATCGGATACTCTAACGGGTTTTAAGATGCATTGTCGTGGTTGGAGATCTATATACTGTATGCCAAAGAGATCTGCATTCAGAGGACGGAAGACTTAA 2121 0.4507 MEASSGLFTGTHDGNELLVIEGHEEPKPVKNLDGQLCEICGDTVGLTVDGDLFVACEECGFPVCRPCYEYERREGTQVCPQCQTRYKRIKGSPRVEGDEDEDDVDDIEQEFKMLQGKMSYGEDDENAKSPSLVIAKVNGELPIGESASATWDEKDKERIDDWKLNQGNLWPETDASTDPEKAMRDEARQPLSRKVAIPSGRLSPYRMMVGARLILTVLFIQYRVLHPVPEAIGLWLISVACEIWLALSWMLDQLPKWFPTDRETYLDRLSIRYEPEDKPNLLSPIDVFVTTVDPIKEPPLVTANTVLSILAMDYPADRIACYVSDDGASMLTFEALQETADFARKWVPFCKKYSTEPRAPEKYFSEKIDFLKDKVQPTYVKERRTMKREYEEFKVRINALVARSMRVPQEGWTMKDGTPWPGNNTRDHPGMIQVLLAQSGGPESDAAGNELPGLVYVSREKRPGFPHHSKAGALNALLRVSAVLSNAPFVLNLDCNHYVNNSKAVREATCFFMEQQTGKSISFVQFPIRFDGLDTHDRYANRNTVLFDIKLRCEDGIQGPAYVGSACIFRRKALYGCDPPKVSKRPKMVGCDCCPCFGVRRKLQVHSKHDGNGDEATITGKSAIFVNSTLDEQGDIPSSSSLAALLKEAIHVMSSSYEDRTPWGKEVGWSYGSIASDTLTGFKMHCRGWRSIYCMPKRSAFRGRKT 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach2g01669 706 Pfam Cellulose synthase 285 610 IPR005150 GO:0016020|GO:0016760|GO:0030244
Bach2g01669 706 Pfam Cellulose synthase 620 704 IPR005150 GO:0016020|GO:0016760|GO:0030244
Bach2g01669 706 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 19 110 IPR013083 -
Bach2g01669 706 SUPERFAMILY RING/U-box 21 105 - -
Bach2g01669 706 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 188 704 - -
Bach2g01669 706 Coils Coil 383 403 - -
Bach2g01669 706 FunFam Cellulose synthase 19 110 - -
Bach2g01669 706 SUPERFAMILY Nucleotide-diphospho-sugar transferases 297 694 IPR029044 -
Bach2g01669 706 CDD mRING-HC-C4C4_CesA 35 85 - -
Bach2g01669 706 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 274 369 IPR029044 -
Bach2g01669 706 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 424 578 IPR029044 -
Bach2g01669 706 MobiDBLite consensus disorder prediction 168 190 - -
Bach2g01669 706 ProSiteProfiles Zinc finger RING-type profile. 37 83 IPR001841 -
Bach2g01669 706 Pfam Zinc-binding RING-finger 27 104 IPR027934 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach2g01669 Bach-Chr2 25316701 25320304 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach2g01669 1 703 Cell Wall Biosynthesis AT5G17420 65.212 0.0 1003
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach2g01669 K10999 - gmx:100777270 1084.71