Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach2g01636 ATGGGCAGAATTTTTCTCCGTGTTAAAGGAAATGCCACTGAGCATCCCTTAGAGCGACCACCATATTTTCTTTCTCAGCCAATCCCACCTTCACCTCCGACCTTTCGATCTGATGGGTTCAATTTAAACGACAAGGTGAGCCCCAGTATACTGCTCATCATTATAATTGTGGCCATTGTTTTCTTCGTTTCTGGTTTGCTTCATCTCCTTGTTAGATTCCTATGGAGACCTTCTAATAGAGAGGCAGATGATTTAGATAATGTGACTGCTCTTCAAGGGCAATTGCAGCAACTCTTCCACCTCCATGATGCTGGGGTTGACCAGTCCTTCATAGACACCCTTCCTGTCTTCAATTACAAAGCCATTATAGGATTAAAGAACCCATTTGATTGTGCTGTTTGTTTGTGTGAATTCGAGCCTGAAGATAAGCTCAGATTGTTACCTAAATGTAGCCATGCCTTTCACATGGAGTGTATAGATACTTGGCTCCTTTCCCACTCTACTTGCCCTATTTGTAGAGCTAACTTGCTCCCTGATTTCTCTTCAAACAATAGCTGTTCCCCCATCGTTCTTGTCCTAGAATCTGGGAGTGAGAGTTCAAGAGAGATTGTCCCAGAAAGAGAGGATGCTATTGACGGAAGCAATTCAGTTATAAGAGCAAATTCTCATCTGGGTTGCCACGGAGACAACGAACTTGGGTCAACCCGTGTTGATTTGGCTCATAAATCGGTTGATTTGAGTTCAAATGAAAATACTGACCCAATCATAGCGGGGGATTCAATGGAAAAAGTAGTCACAGTGAAGCTGGGGAAGTACAGGAGTGTGGATGGTGGCGAAAGCAGCAGCGATAACAATGCAGATGCAAGAAGATGCTTCTCTATGGGGTCCTTTGCTTATGTTATGGACGAGAACTCGTCACTGCAGGTACCCGTAAGAATCCCAGAGAAAAAACAGCCAAGTAAGAAGCCTGCCTTACCATTAACACCTGGACACAGACTTGCAATGTCAGAATGTGACTGTGAATCCAGAAGAGATTTCAAGTTCGCAGCTTTTGATGGAAATAGAAGCGTCGACGTTTATGGGGTTGGCAATTCTGGTAATGCCAATGGAGCTGCTATTGGGGGTAGCAGAAAAGAGAGTTTCTCAATTTCCAAGATTTGGATGAGAGGGAAGAAGGATAAACCAAATGCAGTGGCTGAAGGATCCAGAAGAACTGTTTCGTTCCGGTTCCCAGTTCGGGGAAATGCCGTTACTACAGATGATTTTAAGAGCAAGAATGAGAAATTCGACACAAGGAGTACTATTTCTGAAATGGATATTGGCAAGTGGGAAAATGGAGCGAGCGAATACGGCTATGACGAAGAAAATCAGAGCAGTTATAGTATGGATTCTCAGGCAAGAGCACCTTCCTTTGCAAGAAGGACTCTGCTTTGGCTTACGGGTAGACAGAACAAGGTCATTCACTCGTCCTCTGCATCCAACTCCTAG 1488 0.4415 MGRIFLRVKGNATEHPLERPPYFLSQPIPPSPPTFRSDGFNLNDKVSPSILLIIIIVAIVFFVSGLLHLLVRFLWRPSNREADDLDNVTALQGQLQQLFHLHDAGVDQSFIDTLPVFNYKAIIGLKNPFDCAVCLCEFEPEDKLRLLPKCSHAFHMECIDTWLLSHSTCPICRANLLPDFSSNNSCSPIVLVLESGSESSREIVPEREDAIDGSNSVIRANSHLGCHGDNELGSTRVDLAHKSVDLSSNENTDPIIAGDSMEKVVTVKLGKYRSVDGGESSSDNNADARRCFSMGSFAYVMDENSSLQVPVRIPEKKQPSKKPALPLTPGHRLAMSECDCESRRDFKFAAFDGNRSVDVYGVGNSGNANGAAIGGSRKESFSISKIWMRGKKDKPNAVAEGSRRTVSFRFPVRGNAVTTDDFKSKNEKFDTRSTISEMDIGKWENGASEYGYDEENQSSYSMDSQARAPSFARRTLLWLTGRQNKVIHSSSASNS 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach2g01636 495 CDD RING-H2_EL5-like 130 173 - -
Bach2g01636 495 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE 43 387 - -
Bach2g01636 495 FunFam RING-H2 finger protein ATL46 93 178 - -
Bach2g01636 495 SUPERFAMILY RING/U-box 110 181 - -
Bach2g01636 495 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 105 178 IPR013083 -
Bach2g01636 495 Pfam Ring finger domain 130 173 IPR001841 -
Bach2g01636 495 ProSiteProfiles Zinc finger RING-type profile. 131 173 IPR001841 -
Bach2g01636 495 SMART ring_2 131 172 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach2g01636 Bach-Chr2 25057366 25058853 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach2g01636 41 492 C3H Transcription Factor Family AT2G18650 45.666 9.95e-102 310
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach2g01636 - - qsa:O6P43_022263 702.59