Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach2g01627 ATGGCTAAGAGGTCCGTGAATATAGCATTCCAAGACTTCTATAAACAGAATCCTCATTACAAAACCAGACTTGATCTTCAAATCAGCGATTCTGAGAATGATGTTGTCAAATCTGCATTTGCAGCTTTAGATTTAATAGAGAAGAGAAAAGTGCAGGCCATCATTGGGCCTCAATCATCAGAACAAGCAAGGTTCATAATAGAACTTGGGCAGAACTATAGGGTACCCATCCTTTCGTTTTCGGCCACAAGTCCTTCGCTTTCCCCAATTCGAAGCAAATTTTTCATTCGTACGGCACAAGATGATTGCTCTCAGGTGAAAGCCATCGCTGAGATAGTTAAAACTTATGGTTGGAGGGAGATCATTCTAATATACGAAGACACAGAATATGGGAATGGCCTCATCCCCTATCTCCACGATGCCTTGAAAAATATTGACACACGAGTGCGGAACAGGAGTGTCATTGATCCACGTTCTAATGACATTGAAAACCATGTTTCAGAAGAGATCAACAAGCTAAAACGCTCGCCAACAAAAATATTTCTCGTTCATATGACAACTGCTCTTGGGTCTGTGTTTTTCCCAGCTGCTCAGGAAGCTGGAATGATGAAGGCGGGGTATGGGTGGATAGTCACTCAAGGACTATCTGGGTACCTAAATCCTATGGTTCCAAAAGTAATGGACTCAATGCAAGGTTTTATAGGAGTGAGGCCAAGATTACCCCACACCGAAAGGCTTGAAGACTTCAAAAGAAGATGGGAATCCTCAGTTGAAGTAAACAGCAAGTCCATTCCGGTAACCCTCTTCGGATTGTGGGCTTATGATACAGTTTGGGCATTGGCAATGGCAGCAGAGAGAAGGCAAAAAGTCACAAATAAAAGCAGAGACCTTCTCGATGAAATTCTGGCTACTAATTTCTCAGGACTCTCGGGCAATTTCAGTTTGGTTAAAAGACAGTTAGAGCCATCACAACTTGAAATATTCAATTTGATAGGACATACAGAAAGGGTTATTGGATATTGGAGTCCAGAGACAGAGAGTTTCCAGGACAAGTCAAAAGTAAAGGAGAAACTCAAGCCACCAATATGGCCAGGTGACACAACAGAGCAACCTACAAAATTGAGAATTGGGGTCCCAAAGAAAAAGGGTTTTCTTGAATTTATGAAAGTAGAAAGGCGATCTCCAGATGGTGTAGAAACTGTTTCTGGATTTGCTATCGATGTATTTCGGGAAGTGGTGAAAGTTTTACCCTTTCCCTTTCCTTACGAGTTTAAGCCATTCGAGAAAAAGAATGGAGACGCTGCTGGGACCTATGATGATCTTTTGAAACAGATTTACCAACAGAAGTTCGATGCTGTGATTGGAGACGTAACAATTATTGCTGAACGGACAAAATACGTAGACTTCACGTTGCCATATGCAGAATCAGAGGTGTGCATGGTGGTTCCAATGAAGCCTGATGAGAGAGGAAACATGTGGATTTTCTTAAAGCCTCTGAGTTTGGGTCTTTGGTTGACAACTGGTGCAGCTTTCGTCATTACAGAGGAGAAAATAGTGAGCAATTGGTCGCGGTTTTTGCTAATCATATGGGTATTTGTGGTACTAATCATAACACAGAGTTACACTGCGAGTTTAGCTTCAATGTTAACAGTTCAAAGACTACAGCCCGCTTTCCTTGATATAAAAGAGATCAAAAGAAACAATTATTCTGTGGGATACCAGAAAGATACCTTTGTGAGAGGGTTCCTTGTAGAAGAATTGGAATTCAATGAGAGCAATTTGAGGGCTTATGAAACAGCTGAAGAGTTTCATCATGCCATGTTGAATGGAAGCAGCAATGGTGGAGTGGCTGCTATATTTGATGAAATCCCATATATGAATATCTTCCTCAAAAAATATGGCTCTAGATATAAGATGGTTGGACCAACCTACAAAACCGCTGGATTTGGCTTTGCATTCCCAAAAAAATCTCCTCTAGTATCTTATTTTTCAAAGGCAATCTTAAATGTGACTGAAGATTCGGACAAATTTGAAGGGATAAAGAACAAGTACTTCTCAAGCGGGTTTACATGTAACGAAGATCAAAGTGCCTCAATCACTCTAGATAGTCCAAGTCTTACTCTGTCTAGCTTTGCTTGCCTCTTCGTCATCACGGGAGTCGCTTCACTGTTCTCACTTGCGTGCCATGTGTTTTGCTTCTTATACTCTCAATGGCCTCGTTTCAGGAGCATTTGTTCTCAAGAGAGGTCCTTTTGGTGGGCTCTGACTGAAATGGCAAAGCATTTTCATCGGAAAGATAGCTCTTTATATCCTCCAAATAGAACTGATTCCGGAATACACCCTGCAACGGATGAAGCTTCCTTCGCTGATTCTGATGCTGACACTGATGCCAATGGCTCGGACATCAATCTATCAAGAACTATGAGTCTGAACGAAGAAGCAGTTAACGAGGAACACTCTCCTGCTTATTTGCCTCCCTCATCCTAG 2487 0.417 MAKRSVNIAFQDFYKQNPHYKTRLDLQISDSENDVVKSAFAALDLIEKRKVQAIIGPQSSEQARFIIELGQNYRVPILSFSATSPSLSPIRSKFFIRTAQDDCSQVKAIAEIVKTYGWREIILIYEDTEYGNGLIPYLHDALKNIDTRVRNRSVIDPRSNDIENHVSEEINKLKRSPTKIFLVHMTTALGSVFFPAAQEAGMMKAGYGWIVTQGLSGYLNPMVPKVMDSMQGFIGVRPRLPHTERLEDFKRRWESSVEVNSKSIPVTLFGLWAYDTVWALAMAAERRQKVTNKSRDLLDEILATNFSGLSGNFSLVKRQLEPSQLEIFNLIGHTERVIGYWSPETESFQDKSKVKEKLKPPIWPGDTTEQPTKLRIGVPKKKGFLEFMKVERRSPDGVETVSGFAIDVFREVVKVLPFPFPYEFKPFEKKNGDAAGTYDDLLKQIYQQKFDAVIGDVTIIAERTKYVDFTLPYAESEVCMVVPMKPDERGNMWIFLKPLSLGLWLTTGAAFVITEEKIVSNWSRFLLIIWVFVVLIITQSYTASLASMLTVQRLQPAFLDIKEIKRNNYSVGYQKDTFVRGFLVEELEFNESNLRAYETAEEFHHAMLNGSSNGGVAAIFDEIPYMNIFLKKYGSRYKMVGPTYKTAGFGFAFPKKSPLVSYFSKAILNVTEDSDKFEGIKNKYFSSGFTCNEDQSASITLDSPSLTLSSFACLFVITGVASLFSLACHVFCFLYSQWPRFRSICSQERSFWWALTEMAKHFHRKDSSLYPPNRTDSGIHPATDEASFADSDADTDANGSDINLSRTMSLNEEAVNEEHSPAYLPPSS 828
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach2g01627 828 Gene3D - 631 693 - -
Bach2g01627 828 Pfam Receptor family ligand binding region 4 331 IPR001828 -
Bach2g01627 828 Gene3D - 20 322 - -
Bach2g01627 828 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 7 737 IPR015683 -
Bach2g01627 828 Pfam Bacterial extracellular solute-binding proteins, family 3 400 686 IPR001638 -
Bach2g01627 828 SMART GluR_14 373 687 IPR001320 GO:0015276|GO:0016020
Bach2g01627 828 Pfam Ligand-gated ion channel 687 721 IPR001320 GO:0015276|GO:0016020
Bach2g01627 828 SUPERFAMILY Periplasmic binding protein-like I 8 365 IPR028082 -
Bach2g01627 828 MobiDBLite consensus disorder prediction 772 802 - -
Bach2g01627 828 Gene3D - 514 580 - -
Bach2g01627 828 Gene3D - 368 495 - -
Bach2g01627 828 Gene3D - 101 345 - -
Bach2g01627 828 FunFam Glutamate receptor 368 492 - -
Bach2g01627 828 FunFam Glutamate receptor 101 262 - -
Bach2g01627 828 SUPERFAMILY Periplasmic binding protein-like II 369 686 - -
Bach2g01627 828 PIRSF IGluLR_plant 514 824 IPR017103 -
Bach2g01627 828 PIRSF IGluLR_plant 1 515 IPR017103 -
Bach2g01627 828 CDD GluR_Plant 373 685 - -
Bach2g01627 828 CDD PBP1_GABAb_receptor_plant 1 344 IPR044440 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach2g01627 Bach-Chr2 24974737 24978378 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach2g01627 5 766 Ion Channels AT2G29110 40.357 0.0 584
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach2g01627 K05387 - qsa:O6P43_022275 884.404