Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach2g01624 ATGACCAAGGAGCTAATACCCATAGGGGTTATTCTTGATTTGACCAATTCCTCAATTGGAAGCATGGCTGACACCTCCATATCCATGGCCCTCCATGATTTCTATAGAAAAAACGCTCACTACAAAACCAGACTCCTTCTTCGGAGAAGAGATTCCAAAAATAATGTCGTCAAAGCAGCATTTGCAGCATCTGATTTGATAAAGAATGAAAAGGTGCATGCAATTATCGGGCCTCAAAGGTCAGGCCAAGCAAAGTTCATCAGAGAACTTGGAAACAAATCTCAAGTGCCCATCATCTCATTTTCTGCTACAAGCCCATCTCTTTCCCCAACCCGAAACGATTTTTTCATTCGTACGGCACAAGATGATTGCTCTCAGGTCAAAGCTATAGCCGCCATTGTTGAAGCTTATGGTTGGCGGGAGATCGTCCTAATATATGAAGACACAGTATACGGGAATGGTCTCATCCCATGTCTCATTGATACCTTTGTGAAGATCAACACACGAGTGCCTTACAGAGTTGTGATTGACCCAAAATCTGAAGAAACTCAAATTTTGAAGGAGCTTCAAAATATAATCACACACACGCGAACAAAAATCTTTCTTGTTCATATGACGGCTGAGCATGGGTCCAAGTTATTTTTAGCTGCAAAAAATGCAAGCATGATGGAAAAAGGGTATGCGTGGATAGTCACCGAAGGACTGTCTACTCTGCTCGACCCTGTGGATGCAAAGGGGATGGACTCCATGAATGGTGTCTTGGGAGTAAGGCCAAGGGTGCCAATGGTACCACAGGACTTCAGAAGAAGATGGGAAGTCTTCGCAAGGAAAGAAAACACAAGCAGTGAATCCCCATTAACCCTCTTCGGGTTGTGGGCTTATGACACAGTTTGGGCGCTGGCAATGGCAGTAGAGAAAGCTGGATTAACAAATTCTTCCTTTCAAAACCAAAATGTTAGCAATAATACCGTATTTGATTTTGCAAATATAGTTGGGTATGAAACGGGTCCAAGGCTTCGCAAGGAAATTCTGGCCACTAATTTTTCAGGAGTCTCCGGGAATTTCAGTTTGATTAAAGGACAGTTAGAGCCATCCGAAATTGAAATATTCAATTTGGTAGGACGTAAAGAGAAGATTATTGGATATTGGAGCTCAACCAAGTCAAATTTAAAAGTGGAACATAACCCACCAATATGGCCAGGTAACACAACAGAGCGACCAACAAAGTTGAGAATTGGGTTCCCAAATTTTGATGCTGTGGTAGGAGATATAACAATAGTTGCTGATCGTACAGAACATTTTGATTTTACATTGCCATATTCAGAATCTGGGGTGTCCATGGTGGTTCCGATGAAGCAAGACCAGAGAATTAACATGTGGATCTTCTTAAAGCCTCTGAGTTGGGATCTGTGGTTAACGACAGGTGCAGCTTTCTTCTTCACAGAGGAGAAAATAGTGAACAATTGGTCGCGGTTGGTGCTGATTGTATGGGTATTTGTGGTATTGATCATAACACAAAGTTACACCGCGAGTTTAGCTTCCATTTTAACTGTTCAGAGATTGCAGCCTGCTTTCATGGACATAAAAGAGATCCAGATGAATAATTACGATGTGGGATACCAGGCCGGATCCTTTGTAAGAAATCTCCTCGTAGACCAACTGGGATTCAACGACAGAAAGTTGAAGGCTTACGAAACAGCTGAAGAGTTTCATGAAGCACTATCCATTGGTACTGTGGCTGCCATATTCGATGAAATCCCGTATCTGAACGTCTTCCTTGAAAAATATGGTTCTAAATATAATATGGTTGGACCTGTCTATAAAACTGGTGGATTTGGCTTTGCGAGTCTCTCTCTCTCTATCCCCCTCTGTTTTCATGGTATAGATGCTAATTGCAGATTTCTGGTTATGTTTCAGGCATTCCCACTAAATTCTCCTCTGGTCTCTGACTTTTCGAAGGCAATCTTAAATGTAACTGAAGGTCAGGAGAAACGCTTCTCCACCAGTGGAATCACATGTGACGATGGAAGTGCCTCTGTGTCATTAGATAGTTCAAGTTTGACTGTGAACAGCTTTGGGGGACTCTTCATCATCACATTAGCTACTCAACTGCTCTCTCTCATATTCCATGCATTCAAGTTCCTGCATTCTCAGTGGCCTGATTTGAAGGAAATCCGTTCTGATCAGGGATCTCTCTGGGTAGCAATCACCGAAATTGTAAGGCGTTTTGATCGGAAAGATAGCTCTTTTGCCCTTGCAAGTAGAAGCAACTCAAGGGTATTTCCAGTAGCAAATCCAGCAACAGATGAAGCTTCCGTCACTGCTGATGATGCCACAGACAACGAATCAACAACTCGGAATCAAAAATCATATATCGTTGCACTAAACGAATACAATCAGATGGATAATCATTTATTAGTTCCAAATGAGCGTCACTCATCCCCTAGCTTGTAA 2454 0.4222 MTKELIPIGVILDLTNSSIGSMADTSISMALHDFYRKNAHYKTRLLLRRRDSKNNVVKAAFAASDLIKNEKVHAIIGPQRSGQAKFIRELGNKSQVPIISFSATSPSLSPTRNDFFIRTAQDDCSQVKAIAAIVEAYGWREIVLIYEDTVYGNGLIPCLIDTFVKINTRVPYRVVIDPKSEETQILKELQNIITHTRTKIFLVHMTAEHGSKLFLAAKNASMMEKGYAWIVTEGLSTLLDPVDAKGMDSMNGVLGVRPRVPMVPQDFRRRWEVFARKENTSSESPLTLFGLWAYDTVWALAMAVEKAGLTNSSFQNQNVSNNTVFDFANIVGYETGPRLRKEILATNFSGVSGNFSLIKGQLEPSEIEIFNLVGRKEKIIGYWSSTKSNLKVEHNPPIWPGNTTERPTKLRIGFPNFDAVVGDITIVADRTEHFDFTLPYSESGVSMVVPMKQDQRINMWIFLKPLSWDLWLTTGAAFFFTEEKIVNNWSRLVLIVWVFVVLIITQSYTASLASILTVQRLQPAFMDIKEIQMNNYDVGYQAGSFVRNLLVDQLGFNDRKLKAYETAEEFHEALSIGTVAAIFDEIPYLNVFLEKYGSKYNMVGPVYKTGGFGFASLSLSIPLCFHGIDANCRFLVMFQAFPLNSPLVSDFSKAILNVTEGQEKRFSTSGITCDDGSASVSLDSSSLTVNSFGGLFIITLATQLLSLIFHAFKFLHSQWPDLKEIRSDQGSLWVAITEIVRRFDRKDSSFALASRSNSRVFPVANPATDEASVTADDATDNESTTRNQKSYIVALNEYNQMDNHLLVPNERHSSPSL 817
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach2g01624 817 FunFam Glutamate receptor 122 273 - -
Bach2g01624 817 Pfam Receptor family ligand binding region 25 373 IPR001828 -
Bach2g01624 817 Gene3D - 18 127 - -
Bach2g01624 817 SMART GluR_14 346 665 IPR001320 GO:0015276|GO:0016020
Bach2g01624 817 Gene3D - 481 550 - -
Bach2g01624 817 Pfam Ligand-gated ion channel 612 701 IPR001320 GO:0015276|GO:0016020
Bach2g01624 817 Gene3D - 128 296 - -
Bach2g01624 817 Pfam Bacterial extracellular solute-binding proteins, family 3 416 611 IPR001638 -
Bach2g01624 817 CDD PBP1_GABAb_receptor_plant 8 385 IPR044440 -
Bach2g01624 817 PANTHER OS06G0188250 PROTEIN 3 371 - -
Bach2g01624 817 Gene3D - 414 476 - -
Bach2g01624 817 PIRSF IGluLR_plant 1 415 IPR017103 -
Bach2g01624 817 PIRSF IGluLR_plant 413 482 IPR017103 -
Bach2g01624 817 PIRSF IGluLR_plant 638 808 IPR017103 -
Bach2g01624 817 PIRSF IGluLR_plant 476 620 IPR017103 -
Bach2g01624 817 Gene3D - 328 413 - -
Bach2g01624 817 SUPERFAMILY Periplasmic binding protein-like I 5 384 IPR028082 -
Bach2g01624 817 SUPERFAMILY Periplasmic binding protein-like II 416 658 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach2g01624 Bach-Chr2 24957968 24961045 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach2g01624 8 726 Ion Channels AT5G27100 32.172 5.47e-135 422
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach2g01624 K05387 - qsu:112007225 766.148