Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach2g01623 ATGGCATGCTACCTTCTTTATCATTGTCTTCTCCTCTCCATTGCTCAGTTCGGAGGTGCTGTTCCACTCTTAGGAGGGAAGAAGTTAATTGTTGGGATACCAAAGAATAAAGGTTTCGACCAGTTTGTTGATGTAAAACTGAATTCTAGTACAAACCAAGTGGTCGATGTCACTGGCTACTCCATTGACGTTTTCAATGCAACAGTGAATCATCTGTTGCAGTTAGGTTTCAATGTTTCTTATGAATTCCAAGCTTTCGTGGACAGATCTGGGAAACGAGCTGGGTCTTACGACCAACTTCTGCAACAGATTCCTGCTCAAAAGGTAAATATAAATCCAGAAAATGAAGCAGGTTCAACACGTCAAAGACCTTCTACAAGGATATCAATCTTGTGGCTTCCTTTAGTACAAATGGTGCTACCTGAAAGAGAGTCAGTTGCCAAGAACTGCTCCAAGTTTGTGTTGGTGGTATGGTTGATGTTAGCGTTTGTTCTTATGCAAAGTTATACATCAAGCTTGTCGTCAATCTTGACATTGGACCAGTTGCAGCCTACCTACCCTACCCTCAATGATCTTAAAAGAAATGGAGAATATGTTGGATATCCCACTTCTTCCTATGTACTGGATTTGATGTTGAACAGCTTCAAGTTTGACAAATCAAAGCTAAAGGAATGCATCGGCATTGAGGATTATCGCGAGGCTTTAGACAAAGGAAGCCGCAATGGTGGTGTTGCTGCTATTTTTGATGAAGAAACCTACATTAAGGTCTTCCTCAAAAGATATGGTTCCAAATACTACAAAATGGTTGGACCTCATTACCATACAGCTGGTTTTGGTTTTGCATTTCCAATAAACTCGACCCTCACCTCTCACTTTTCAAGAGCCATCCTAAATGTCACCCAAAGTGAAGTAATGGAACAGATTGAACGCAAATATTTTGGTAGCAATGAAGATGAAGAGCTCGAAGACCAATCTAACCCGTCATTAGACGCTTGCAACCTCACTGCACATAGCTTTGCCGTTCGGGGGTGCAGTTCCACTTCCACTCTTGGGAGGAAAGAAGTTAGTAATTGGGATACCAAAAGGTTTCGAGCCGTTTGTTGTTGCAGACCTGAACCCAAGTACAAACCAAGTTGGTGTGGCTGGGCATTTCCAATAAACTCAAGCCTCACCTCTCACTTTTCAAAAGCCATACTAAATGTCACCCAAAGTGAAGAAATGGAACTGATTGAACGGAAATATTTTGGTGACAACGAAGATGAACAGCTCCAAAACCGGTCTAACGCGTCACTAGACACTCGCAGCCTCACAACACATAGCTTTGCAGGTCTGTTCATGATCACAGGATTGCTCACCTTTCTAGTCTCTGAAAGCCCTAATTGGCTAAAGCCTCTTAAGCTGGCCAAGATCTATAGTCACATGTGTTTATCCTCCCTACTTCCTGAAAGGATTAATCAATCAGAGGACGGATCTACAAATGTTGTCTCAACAGAAGAATCAAACAACCATCCAGAAATACATTCAATATCTCCTTTCACTCTTCCTATTGAAACATTGCCTACGTAG 1566 0.4189 MACYLLYHCLLLSIAQFGGAVPLLGGKKLIVGIPKNKGFDQFVDVKLNSSTNQVVDVTGYSIDVFNATVNHLLQLGFNVSYEFQAFVDRSGKRAGSYDQLLQQIPAQKVNINPENEAGSTRQRPSTRISILWLPLVQMVLPERESVAKNCSKFVLVVWLMLAFVLMQSYTSSLSSILTLDQLQPTYPTLNDLKRNGEYVGYPTSSYVLDLMLNSFKFDKSKLKECIGIEDYREALDKGSRNGGVAAIFDEETYIKVFLKRYGSKYYKMVGPHYHTAGFGFAFPINSTLTSHFSRAILNVTQSEVMEQIERKYFGSNEDEELEDQSNPSLDACNLTAHSFAVRGCSSTSTLGRKEVSNWDTKRFRAVCCCRPEPKYKPSWCGWAFPINSSLTSHFSKAILNVTQSEEMELIERKYFGDNEDEQLQNRSNASLDTRSLTTHSFAGLFMITGLLTFLVSESPNWLKPLKLAKIYSHMCLSSLLPERINQSEDGSTNVVSTEESNNHPEIHSISPFTLPIETLPT 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach2g01623 521 Gene3D - 167 313 - -
Bach2g01623 521 Pfam Ligand-gated ion channel 113 449 IPR001320 GO:0015276|GO:0016020
Bach2g01623 521 Pfam Bacterial extracellular solute-binding proteins, family 3 165 314 IPR001638 -
Bach2g01623 521 MobiDBLite consensus disorder prediction 487 521 - -
Bach2g01623 521 Gene3D - 23 112 - -
Bach2g01623 521 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 378 455 IPR015683 -
Bach2g01623 521 SMART GluR_14 28 315 IPR001320 GO:0015276|GO:0016020
Bach2g01623 521 SUPERFAMILY Periplasmic binding protein-like II 373 418 - -
Bach2g01623 521 Gene3D - 175 277 - -
Bach2g01623 521 SUPERFAMILY Periplasmic binding protein-like II 4 316 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach2g01623 Bach-Chr2 24949116 24953876 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach2g01623 361 455 Ion Channels AT5G11210 32.653 1.81e-07 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach2g01623 K05387 - aip:107641909 253.447