Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach2g01622 ATGGCAAAGGAAAATAATTACTATTGCAACCTTCTATTTTGTCTTCTCCTCTCCGTTGCTCAGTTCGGGATTGCTGTTCCACCCTTCGGAGGAAAGAAATTAATAATTGGGATTCCAAAAGATAAAGCTTTTGACCTGTTTGTTGATGTCAAGCTGAAGCCTAATACAACCGAAGTGGTCGATGCGTCTGGGTACTCTATACAAGTTTTCAATGCTACAGTAAATCATCCGATGCATTTAGGTTTCAACGTTTCTTATAAATTCGAAGCCTTCGTAGACACAAATGGGAATCCAGCTGGGTCTTACAACCAACTTCTGCAACAGATTCCCACTGGAAAGAAGTATGATGCTGTGGTGGGAGATATAACGATTCTGGCTAACCGGGCAAATTATGTGGATTTTACCTTACCATATACTGAGTCAAGTGCAAGAATGCTGGTAAGAGTTTCTCGTAATCAAGATTTGAATATGTGGACATTTCTACGACCTTTTAGCTGGGATCTTTGGGTGACCATATTCATGGCTTGTGTCTTTATTGGTGCTACAATACGGTTCATGGAACGTAAGGAAAATAGAAATGCAGAAAATGAAGAAGATTCAACACGTCAAAGACAACTCACAGGGATATCATTAATCTTGTGGCTTCCTTTAGTACAAGTGGTGCTGCCAGAAAGAGAGTCGGTTACCAAAAACTGCTCAAAGTTTGTGTTGGTGGTATGGTTGATGTTAGCATTTGTTCTTATGCAAGGTTACACAGCAAGCTTGTCATCAATATCAACTTTGAACCAGTTGCAACCTACCTACCTTACCCTTGATGATCTGAAAAGAAATGGAGAATACGTTGGATATCCCCCAGAATCCTTTGTACGAGATTTGATGGTGGACAGCTTCAACTTTGAAAAAACAAAGCTAAAGGAATGCATCGGCATTGAGAATTATCACGAGGCTTTAAACAAAGGAAGCCGCAATGGTGGGGTTGCTGCTATTTTTCACGAAGAACGCTACATTAAAGTCTTCCTCAAAAGATATGGTTCCAAATACTACAAAATGGTTGGACCTCGTTACCATACGGCTGGTTTTGGTTTCGCATTTCCAATAAACTCGAGCCTCACCTCTCACTTTTCAAAAGCCATACTAAATGTCACCCAAAGTGAAGAAATGGAACTGATTGAACGGAAATATTTTGGTGACAACGAAGATGAACAGCTCCAAAACCAATCTAACGCGTCACTAGACACTCGCAGCCTCGCAACACTTAGCTTTGCAGGTCTGTTCATGATCACAGGATTGCTCACCTTTCTAGCTGTGCTAGTCTCTGAAAGCCCTAATTGGCTAAAGCCTCTTAAGCTGGCCAAGATCTATAGTCACATATGTTTATCCTCCCTACTTCCTGAAAGAATTAATCAATCAGAGGACGGATCTACAAATGTTGTCTCAACAGAAGAATCAAACAACCATCCAGAAATACATTCAATTTCTCCTTTCACTCTTCCTATTGAAACATTGCCTATGTAG 1515 0.4053 MAKENNYYCNLLFCLLLSVAQFGIAVPPFGGKKLIIGIPKDKAFDLFVDVKLKPNTTEVVDASGYSIQVFNATVNHPMHLGFNVSYKFEAFVDTNGNPAGSYNQLLQQIPTGKKYDAVVGDITILANRANYVDFTLPYTESSARMLVRVSRNQDLNMWTFLRPFSWDLWVTIFMACVFIGATIRFMERKENRNAENEEDSTRQRQLTGISLILWLPLVQVVLPERESVTKNCSKFVLVVWLMLAFVLMQGYTASLSSISTLNQLQPTYLTLDDLKRNGEYVGYPPESFVRDLMVDSFNFEKTKLKECIGIENYHEALNKGSRNGGVAAIFHEERYIKVFLKRYGSKYYKMVGPRYHTAGFGFAFPINSSLTSHFSKAILNVTQSEEMELIERKYFGDNEDEQLQNQSNASLDTRSLATLSFAGLFMITGLLTFLAVLVSESPNWLKPLKLAKIYSHICLSSLLPERINQSEDGSTNVVSTEESNNHPEIHSISPFTLPIETLPM 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach2g01622 504 SMART GluR_14 33 397 IPR001320 GO:0015276|GO:0016020
Bach2g01622 504 Pfam Ligand-gated ion channel 397 429 IPR001320 GO:0015276|GO:0016020
Bach2g01622 504 SUPERFAMILY Periplasmic binding protein-like II 12 398 - -
Bach2g01622 504 Gene3D - 311 402 - -
Bach2g01622 504 Gene3D - 28 156 - -
Bach2g01622 504 Pfam Bacterial extracellular solute-binding proteins, family 3 101 396 IPR001638 -
Bach2g01622 504 Gene3D - 157 293 - -
Bach2g01622 504 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 31 439 IPR015683 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach2g01622 Bach-Chr2 24939289 24942194 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach2g01622 28 438 Ion Channels AT2G29120 41.019 2.46e-76 256
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach2g01622 K05387 - aip:107641909 462.225