Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach2g01621 ATGGCATGCTACCTTCTTTATCATTGTCTTCTCCTCTCCATTGCTCAGTTCGGAGGTGCTGTTCCACTCTTAGGAGGGAAGAAGTTAATAGTTGGGATACCAAAGAATAAAGGTTTCGACCAGTTTGTTGATGTAAAACTGAATTCTAGTACAAACCAAGTGGTCGATGTCACTGGCTACTCCATTGACGTTTTCAATGCAACAGTGAATCATCTGTTGCTGTTAGGTTTCAATGTTTCTTATGAATTCCAAGCTTTCGCGGACAGATCTGGGAAACGAGCTGGGTCTTACGACCAACTTCTGCAACAGATTCCTGCTCAAAAGGTAAATATAAATCCAGAAAATGAAGCAGGTTCAACACGTCAAAGACCTTCTACGAGGATATCAATCTTGTGGCTTCCTTTAGTACAAATGGTGCTACCTGAAAGAGAGTCAGTTGCCAAGAACTGCTCCAAGTTTGTGTTGGTGGTATGGTTGATGTTAGCGTTTGTTCTTATGCAAAGTTATACAGCAAGCTTGTCGTCAATCTTGACATTGGACCAGTTGCAGCCTACCTACCCTACCCTCAATGATCTGAAAAGAAATGGAGAATATGTTGGATATCCCACTTCTTCCTATGTACTAGATTTGATGTTGAACAGCTTCAAGTTTGAGAAATCAAAGCTAAAGGAATGCATCGGCATTGAGGATTATCGCGAGGCTTTAGACAAAGGAAGCCGCAATGGTGGTGTTGCTGCTATTTTTGATGAAGAACCCTACATTAAGGTCTTCCTCAAAAGATATGGTTCCAAATACTACAAAATGGTTGGACCTCATTACCATACAGCTGGTTTTGGTTATCATGAGCTCAGAGGAGCTAAGCTGTCCCTTGAATACTTTCCCATGGCTAAGGAAAATTGCTATGGCTACCTTTTTTATTGTCTTCTCCTCTCCGTTGCTCAGTTCGGGGGTGCAGTTCCACTTCCACTCTTGGGAGGAAAGAAGTTAATAATTGGGATACCAAAAGGTTTCGAGCCGTTTGTTGTTGCAGACCTGAACCCAAGTACAAACCAAGTTGGTGTGGCTGGGTATTCCATTGAAGTTTTCAATGCTACAGTAAATCATCTGTTGCGGTTAGGTTTCAACGTTTCTTATGAACTCCGAGCTTTCGTAAACAGAACTGCGCCTGGGAATCCAGCTGAGTCTTACGACCAACTTCTGCAACAGCTTCCTGCTAAAAAGGTTAATTACAAATCTCATGCACGAGAGTCGGTTGCCAAGAACTGTTCCAAGTTTGTGTTGGTGGTTTGGTTGATGTTGGCATTTGTTCTCATGCAAGGTTACACAGCAAGCTTGTCATCAATATTAACTTTGAACCAGTTGCAACCTACCTACCTCACCCTTGATGATCTGAAAAGAAATGGAGAATATGTTGGATAA 1419 0.4207 MACYLLYHCLLLSIAQFGGAVPLLGGKKLIVGIPKNKGFDQFVDVKLNSSTNQVVDVTGYSIDVFNATVNHLLLLGFNVSYEFQAFADRSGKRAGSYDQLLQQIPAQKVNINPENEAGSTRQRPSTRISILWLPLVQMVLPERESVAKNCSKFVLVVWLMLAFVLMQSYTASLSSILTLDQLQPTYPTLNDLKRNGEYVGYPTSSYVLDLMLNSFKFEKSKLKECIGIEDYREALDKGSRNGGVAAIFDEEPYIKVFLKRYGSKYYKMVGPHYHTAGFGYHELRGAKLSLEYFPMAKENCYGYLFYCLLLSVAQFGGAVPLPLLGGKKLIIGIPKGFEPFVVADLNPSTNQVGVAGYSIEVFNATVNHLLRLGFNVSYELRAFVNRTAPGNPAESYDQLLQQLPAKKVNYKSHARESVAKNCSKFVLVVWLMLAFVLMQGYTASLSSILTLNQLQPTYLTLDDLKRNGEYVG 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach2g01621 472 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 421 468 IPR015683 -
Bach2g01621 472 SUPERFAMILY Periplasmic binding protein-like II 4 280 - -
Bach2g01621 472 Pfam Ligand-gated ion channel 414 466 IPR001320 GO:0015276|GO:0016020
Bach2g01621 472 Gene3D - 72 224 - -
Bach2g01621 472 Gene3D - 362 471 - -
Bach2g01621 472 SMART GluR_14 28 297 IPR001320 GO:0015276|GO:0016020
Bach2g01621 472 Pfam Ligand-gated ion channel 113 222 IPR001320 GO:0015276|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach2g01621 Bach-Chr2 24920875 24926510 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach2g01621 415 472 Ion Channels AT2G24720 43.103 1.78e-06 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach2g01621 K05387 - aip:107641909 209.534