Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach2g01620 ATGGCATGCTACCTTCTTTATCATTGTCTTCTCCTCTCCATTGCTCAGTTCGGAGGTGCTGTTCCACTCTTAGGAGGGAAGAAGTTAGTAGTTGGGATACCAAAGAATCAAGGTTTCTACCAGTTTGTTGATGTAAAACTGAATTCTAGTACAAACCAAGTGGTCGATGTCACTGGCTACTCCATTGACGTTTTCAATGCAACAGTGAATCATCTGTTGCAGTTAGGTTTCAATGTTTCTTATGAATTCCAAGCTTTCGTGGACAGATCTGGGAAACGAGCTGGTTCTTACGACCAACTTCTGCAACAGATTCCTGCTCAAAAGGTAAATATAAATCCAGAAAATGAAGAAGGTTCAACACGTCAAAGACCTTCTACAAGGATATCAATCTTGTGGTTTCCTTTAGTACAAATGGTACTACCTGAAAGAGAGCCATTTGCCAAGAACTGCTCCAAGTTTGTGTTGGTGGTATGGTTGATGTTGGCGTTTGTTCTTATGCAAAGTTATACAGCAAGCTTGTCGTCAATCTTGACATTGGACCAGTTGCAGCATACCTACCCTACCCTCAATGATCTGAAAAGAAATGGAGAATATGTTGGATATCCCGCTTCTTCCTATGTACTAGATTTGATGTTGAACAGCTTCAACTTTGACAAATCAAAGCTAAAGGAATGCATCGGCATTGAGAATTATCGCGAGGCTTTAGACAAAGGAAGCCGCAATGGTGGGGTTGCTGCTATTTTTCATGAAGAACCCTACATTAAGGTCTTCCTCAAGAGATATGGTTCCAAATACTACAAAATGGTTGGACCACGTTATCATACGGCTGGTTTTGGTTTTGCATTTCCAATAAACTCGACCCTCACCTCTCACTTTTCAAGAGCCATCCTAAATGTCACCCAAAGTGAAGTAATGAAACAGATTGAACGCAAATATTTTGGTAGCAATGAAGATGAAGAGCTCGAAGACCAATCTAACCCGTCATCAGACACTTGCAAGCTCACTACACATAGCTTTGGCGGCTTGTTCATGATCACCGGATTTCTCACCATTCTCGCTGTGCTAGTCTCAGAAAGCCCTAATTGGCGAAAGCCTCTTAAGCTGGCCAAGATTCATAGCCAGACATATTTATTATCCCTACTTTCTAAAAGAACTAATCAATCAGAGGACAGATCTACAAATGTTGGCTCAACACAAGAACCAAACAACCATCCAGAAATACATTCAATTTCTCCTTTCGGTCTACCTATTGAAACATTGCCTGGGTAG 1269 0.4121 MACYLLYHCLLLSIAQFGGAVPLLGGKKLVVGIPKNQGFYQFVDVKLNSSTNQVVDVTGYSIDVFNATVNHLLQLGFNVSYEFQAFVDRSGKRAGSYDQLLQQIPAQKVNINPENEEGSTRQRPSTRISILWFPLVQMVLPEREPFAKNCSKFVLVVWLMLAFVLMQSYTASLSSILTLDQLQHTYPTLNDLKRNGEYVGYPASSYVLDLMLNSFNFDKSKLKECIGIENYREALDKGSRNGGVAAIFHEEPYIKVFLKRYGSKYYKMVGPRYHTAGFGFAFPINSTLTSHFSRAILNVTQSEVMKQIERKYFGSNEDEELEDQSNPSSDTCKLTTHSFGGLFMITGFLTILAVLVSESPNWRKPLKLAKIHSQTYLLSLLSKRTNQSEDRSTNVGSTQEPNNHPEIHSISPFGLPIETLPG 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach2g01620 422 Pfam Bacterial extracellular solute-binding proteins, family 3 165 314 IPR001638 -
Bach2g01620 422 SUPERFAMILY Periplasmic binding protein-like II 4 316 - -
Bach2g01620 422 Gene3D - 175 277 - -
Bach2g01620 422 MobiDBLite consensus disorder prediction 384 422 - -
Bach2g01620 422 MobiDBLite consensus disorder prediction 384 406 - -
Bach2g01620 422 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 126 357 IPR015683 -
Bach2g01620 422 SMART GluR_14 28 315 IPR001320 GO:0015276|GO:0016020
Bach2g01620 422 Pfam Ligand-gated ion channel 114 347 IPR001320 GO:0015276|GO:0016020
Bach2g01620 422 Gene3D - 168 313 - -
Bach2g01620 422 Gene3D - 23 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach2g01620 Bach-Chr2 24913266 24915842 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach2g01620 129 356 Ion Channels AT5G11210 36.404 2.13e-39 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach2g01620 K05387 - aip:107641909 311.612