Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach2g01616 ATGGGAATTGAACGAGGAGGCCTCAAGGTCTATAGGAATGGGTGGACTGTGCCGGTGAAGCCATGTGACTCATGCAAATCGACTGCGGCGGCGGTGTTTTGCCGAGTCGATTCGGCTTTCCTATGCATGGCGTGTGATAACAAAATCCACTGCGTCAATAAGCTGGCTTCCCGCCACGAGCGCGTGTGGATGTGCGAGGTGTGCGAGCAAGCCCCTGCCTCCGTCACGTGCAAAGCGGACGCAGCTGCTCTGTGCGTCACGTGCGATTCAGATATCCACTCAGCCAATCCTCTTGCACGTCGTCACGAGCGTGTCCCGGTGGAGCCATTCTTCGACTCGGCTGAGTCGATCGCGAAAGCCTCGGCGGCTTTTAACTTCCTTGTTCCGACTGATCATGGGGTTGGGTCTCATGGGTTCAACCAGGAAGATTCGGAAGCAACACCTTGGCTTATTCCGAACCTGAATTTTAATTCGAAGCTGGTGGATGGTCCAGATATCAAGTCTGGTGAAATATTCTTCTCCGAAATGGATCCATTTCTGGAATTTGATTACTCAAATTCATTTCAGAATAACAACAACGCGGGTAATGATAGCGTAGTGCCAGTTCAAAGCAAACCCACCCCGTTGCCGGTGGTGAATCACTCCGAGACTTGCTTCGACATCGATTTTTGCAGATACAAGCTTTCTTCCTTTAATTACCCAACTCAGTCTATTAGCCAAAGCGTTTCTTCTTCTTCGCTTGACGTTGGAGTGGTTCCGGATGGAAACTCTGTTTCAGAAATTTCCTACTCTTTTGTCAGAAACATGAGTAACAGTTCGGATTCAAGTGGAATGGTGTCTGCGGGTAATATTAACCAAGCGAATATGGACCGGGAAGCAAGGGTGTTGAGATACAGAGAGAAAAGGAAGAACAGAAAATTTGAGAAAACCATTCGCTACGCTTCCAGAAAAGCATACGCCGAAACCCGCCCAAGAATCAAGGGTCGGTTTGCCAAACGGACCGAAATCGATTCGGATGTGGACCGCCTCTATAGCCCTGCGCCTCCCGCCCATTTATCCCTCATGCATGATGTTTACTACGGCGTCGTACCTTCCTTTTAATCAATCATTTTCTTACTTGCAATGTGTGTCACTCTAGTATGTTACGATCATTTCAATGTTGAATGCTATTAATTGATTGATCATGGATATTAATTCGAGTAAATTAGTGCCTAAGGTCATGTTTACGGTTTAGATTGGCGGAGCCGTAGGCCTTGAGATCAAGGACCATGCTGCTCGCTCAGCTTTCTATACCTGAACATTTCCCTCGCCTCGGAAAAAGCCCCTTTGCTATTTTACAGGGCTTTTGTACTGTAACACTCTTATCTTCGCCTCTTTCAGTAAAATGCGTCTCTTTTTTT 1400 0.4736 MGIERGGLKVYRNGWTVPVKPCDSCKSTAAAVFCRVDSAFLCMACDNKIHCVNKLASRHERVWMCEVCEQAPASVTCKADAAALCVTCDSDIHSANPLARRHERVPVEPFFDSAESIAKASAAFNFLVPTDHGVGSHGFNQEDSEATPWLIPNLNFNSKLVDGPDIKSGEIFFSEMDPFLEFDYSNSFQNNNNAGNDSVVPVQSKPTPLPVVNHSETCFDIDFCRYKLSSFNYPTQSISQSVSSSSLDVGVVPDGNSVSEISYSFVRNMSNSSDSSGMVSAGNINQANMDREARVLRYREKRKNRKFEKTIRYASRKAYAETRPRIKGRFAKRTEIDSDVDRLYSPAPPAHLSLMHDVYYGVVPSF 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach2g01616 366 CDD Bbox1_BBX-like 65 107 - -
Bach2g01616 366 CDD Bbox1_BBX-like 21 64 - -
Bach2g01616 366 ProSiteProfiles Zinc finger B-box type profile. 17 64 IPR000315 GO:0008270
Bach2g01616 366 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 21 346 IPR045281 GO:0009909
Bach2g01616 366 Pfam CCT motif 291 333 IPR010402 GO:0005515
Bach2g01616 366 SMART bboxneu5 65 107 IPR000315 GO:0008270
Bach2g01616 366 SMART bboxneu5 17 64 IPR000315 GO:0008270
Bach2g01616 366 Pfam B-box zinc finger 62 107 IPR000315 GO:0008270
Bach2g01616 366 Pfam B-box zinc finger 19 61 IPR000315 GO:0008270
Bach2g01616 366 ProSiteProfiles Zinc finger B-box type profile. 60 107 IPR000315 GO:0008270
Bach2g01616 366 ProSiteProfiles CCT domain profile. 291 333 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach2g01616 Bach-Chr2 24884465 24885973 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach2g01616 1 366 C2C2-CO-like Transcription Factor Family AT5G57660 54.907 3.98e-127 367
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Bach2g01616 zf-B_box 4.2e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach2g01616 - - gmx:100805693 536.184