Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach2g01607 ATGGGTCGAGCTCCTTGCTGTGACAAAGCCAATGTGAAGAAAGGACCTTGGTCTCCAGAAGAAGATGCTAAGCTCAAAGCTTATATTGAAACATATGGAACTGGAGGCAATTGGATTGCTCTTCCCCAGAAAATTGGGCTCAAGAGATGTGGGAAGAGTTGCAGGCTCAGGTGGTTAAATTACCTGAGGCCTAACATCAAGCATGGTGGATTTACTGAAGAAGAAGACAACACCATCTGCAACCTCTACATTAGCATTGGCAGCAGGTGGTCCATTATTGCAGCACAGCTACCTGGAAGGACAGACAATGATATCAAGAATTACTGGAATACCAAGCTGAAGAAGAAATTGCTTGGGAAACGCAAGCAGTCTAATTTTCAGCCCAGAAACACAAACGGGTTAGTGGAAGCGAATTCATATCCAAATGCCCTAAGCAACTCAGCTCTTGAGAGACTTCAACTGCATTTGCAACTTCAAGGCCTTCAAAACCCTATCTCTTTCTATAATAACCCTGCACTGTGGCCCAAGTTGCATCCGTCCCAAGAAAAGATGATCCATAGCTTACAATCCTTCAAAGAAAGCTCTAACCCTTTGATGCAAAATGCTTTGCTGTCTACGCATGCCGAGCAAGGATCTCCAAGAGCTGAAGTTTATAAACCTGCTACTGCTGGTGATGCAGTTCAACAACATGCTGTAAAGATTAGTAGTCCCAAAGATGATCTCCTGGAGAATCCTTTGACTGGAATGTCATCCATGGATACCTCGGTTACCTTCATGGGCACCGGGAATAAGAACCCATTGGACTCAAACCTTGCACCAAGAGGGGAGGGCACCCTTGAGCAGTCTAATATGGGAATTCATCAAGTTTCTGCACTACAAGCTGAACTAGAAGACATTCTCAACAACAGAACAATGTGTTATATTCCACAGGAAGATCAGATAGCTGAATTTGATTGTTTCAGGGAAATCAATGGCTCAAAGGAAAGCTTGATGTGGTGGTCCAATGATTTTGACACAAAATCAACATCCTCAAACTCTTGGGATTCAGCAACTCATGTTCTTCAGACAGATCAGGGGATGTTTCAAGATTATGAACTAGGGTATAGTTTGTAG 1113 0.434 MGRAPCCDKANVKKGPWSPEEDAKLKAYIETYGTGGNWIALPQKIGLKRCGKSCRLRWLNYLRPNIKHGGFTEEEDNTICNLYISIGSRWSIIAAQLPGRTDNDIKNYWNTKLKKKLLGKRKQSNFQPRNTNGLVEANSYPNALSNSALERLQLHLQLQGLQNPISFYNNPALWPKLHPSQEKMIHSLQSFKESSNPLMQNALLSTHAEQGSPRAEVYKPATAGDAVQQHAVKISSPKDDLLENPLTGMSSMDTSVTFMGTGNKNPLDSNLAPRGEGTLEQSNMGIHQVSALQAELEDILNNRTMCYIPQEDQIAEFDCFREINGSKESLMWWSNDFDTKSTSSNSWDSATHVLQTDQGMFQDYELGYSL 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach2g01607 370 Pfam Myb-like DNA-binding domain 69 111 IPR001005 -
Bach2g01607 370 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
Bach2g01607 370 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Bach2g01607 370 PANTHER OS09G0431300 PROTEIN 1 353 - -
Bach2g01607 370 FunFam Transcription factor MYB36 70 139 - -
Bach2g01607 370 CDD SANT 71 111 IPR001005 -
Bach2g01607 370 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
Bach2g01607 370 SMART sant 13 64 IPR001005 -
Bach2g01607 370 SMART sant 67 115 IPR001005 -
Bach2g01607 370 CDD SANT 16 62 IPR001005 -
Bach2g01607 370 SUPERFAMILY Homeodomain-like 11 109 IPR009057 -
Bach2g01607 370 Gene3D - 70 134 - -
Bach2g01607 370 FunFam Transcription factor RAX3 7 68 - -
Bach2g01607 370 Gene3D - 7 68 - -
Bach2g01607 370 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Bach2g01607 370 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 62 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach2g01607 Bach-Chr2 24840210 24841601 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach2g01607 1 179 MYB Transcription Factor Family AT5G57620 79.570 1.10e-102 305
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bach2g01607 Myb_DNA-binding 2e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach2g01607 K09422 - gmx:778083 504.212