Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach2g01597 ATGAATTTCCACCATAACACCTCTCTTGATCGTCGAAGTTGTCTACCTGATAAGAATCCACTCAACTTAGACCTTCTCCTTGAGCCATCTTCTTCCTTTTCTTCTTCATCTTCACCAACTAGTTCTTCCATTGAGCCTCGGATTTTCTCATGCAACTACTGCCAGAGGAAGTTTTACAGCTCGCAAGCACTGGGAGGGCACCAAAATGCTCACAAGCTGGAAAGGACACTGGCAAAAAAGAGCAGAGAGCTTAGTTCAGCCATGCAAACTGGTTATGGAGGATCAGAGCAGCGTTCGTACGATGCTGGGCGTGTTGGATTGGAGAACCAAAGACAAATTAGTGGGAGAGTTGTTGCTGGTGGAGTAAGCCATGAAAGGAGAGAAATTGAGTATGGTTCTAAAGAAGGACTGATGGGATCTTGGTCCAGGGTTTATGGGTCTGAAAATGTTGAGGAGGATATGAACCAACTTGACTTGTCATTGAGGCTTTGA 492 0.4512 MNFHHNTSLDRRSCLPDKNPLNLDLLLEPSSSFSSSSSPTSSSIEPRIFSCNYCQRKFYSSQALGGHQNAHKLERTLAKKSRELSSAMQTGYGGSEQRSYDAGRVGLENQRQISGRVVAGGVSHERREIEYGSKEGLMGSWSRVYGSENVEEDMNQLDLSLRL 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach2g01597 163 ProSitePatterns Zinc finger C2H2 type domain signature. 51 71 IPR013087 -
Bach2g01597 163 ProSiteProfiles Zinc finger C2H2 type domain profile. 49 76 IPR013087 -
Bach2g01597 163 Coils Coil 70 90 - -
Bach2g01597 163 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 13 88 IPR044246 GO:0009788
Bach2g01597 163 SUPERFAMILY beta-beta-alpha zinc fingers 46 76 IPR036236 -
Bach2g01597 163 FunFam Zinc finger protein 2 27 93 - -
Bach2g01597 163 Gene3D Classic Zinc Finger 29 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach2g01597 Bach-Chr2 24770682 24771173 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach2g01597 1 163 C2H2 Transcription Factor Family AT5G57520 49.412 2.17e-26 95.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bach2g01597 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach2g01597 - - vra:106768043 165.236