Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach2g01542 ATGCGGGACAGTGACAAGAAGTTGAATCACAGAGGATCCAGAAAAGTCAGTCATTTAGAGGCACAAAGTGTGCAAAAGCGATGCTTGTCATTCAAATTCAAAAAAGGCAGTACAAAATCCCAAGGAAAGAAGCAGAAACTGAAATCAAAATCTTCCACAAAGCGAGTTGGTGCAAGCTTGTCAAGGAGGAAAGTTACTGACTCTTCCAATAAGGGACTGAGCAAGGATTCTTCGAATAAAAAAATTATTATTAGACGGAATCTGTATAAATCAACTGATGGAAAATTGTTGAAGAAACCGTCTTCATCAAAGTTACAAGGTGAAAATTTTTCTTTTAGTACTGAGAATGAGGTAAAAGATGGTAATGGGGAGGTTAAAACTCAAAAACTGAAGAGAAGGAGAAAGAAGAAAAGGCGAAGGGATAACACAGAGCTTGACGAAGCTTCACGCCTGCAGAGGAGAACAAGGTACCTATTAATTAAAATGAAACTGGAGCAGAACCTCATTGATGCTTACTCTGGGGAAGGCTGGAAAGGTCAGAGTCGGGAAAAGATTAGGCCAGAAAAGGAACTACAGAGAGCACAGAAGCAGATTTTAAAGTGTAAACTTAGTATTCGTGATGCCATTCACCAGTTGGATTCTCTTAGTTCAGTTGGTAGCATTGAAGATTCTGTCATTGCCTCAGATGGGTCTGTTTACCATGAACATATATTCTGTGCAAAGTGCAAGTTGCGTGAAGCTTTCCCAGATAATGATATTATACTCTGTGATGGCACTTGCAACCGTGCTTTTCACCAAAAGTGTCTTGATCCTCCTTTGGACACCAAAAATATTCCTCCTGAAGATGAGGGATGGTTTTGCAAGTTTTGTGAATGTAAGATGGACATATTGGAGGTAGTGAATGCACATCTTGGGACTCACTTCTCCATGGACTGTAACTGGCAGGATGTATTTAAGGAAGAAGCTACTTTCCCTGATGGTGATACTGCATTACTAAATCCAGAAGAAGAATGGCCATCAGATGATTCTGAAGATGATGATTATAATCCAGAGAAGAGAGAAGACGACCATAGCATCAGCACAGAAGATATTGATGATGCTGCTTCTGATGATTTAAGCAATTCTCCTTGTTCGTTGTCTTTAGAGGGTGAATATTCTGCAGGAAAGGAAGGCACTGGCCATGAATCTGTCAATAGCTGCATAGATTCTGATGAATCTGGTGAAATAGCATGTGGCCGTAGGCAACGTAAAGCAGTTGACTACAAGAAACTTTATGATGAAATGTTTGGGAAGGATGCTCCTGCTTGCGAACAAGTTAGTGAAGATGAAGACTGGGGTCCTGCCAGAAGAAAGCGCAGAGAAAAGGAATCTGATGCTGTTAGTACTCTTATGACTCTGCATGAAAGTGAGAATAATCATCCCAATACTGAAAGTGAAGACATCGTAAAGGAAGTTCCTTCAGGCACGCAAATCAAAAGGCCTTGTTTCAGGATTCCATTTGATGCAGTTAAGAAGCTTCGCCAAGCTTTTGCAGAGAATGAACTTCCTCCAAGATCTGTAAAGGACAGTCTTTCAAAAGAGTTGGGGCTTGATGCTGAGAAGGTTAGCAAATGGTTCAAAAATGCACGTTACTTAGCACTTAAAACCAGGAAGCAGCATACAGAAGGAGCAGAACAGCTTCAAAGTTTCATGTCAAGAACCTCGAAGGACTCTAGATCACAAAAGCTGGAGAGAGCTGAGGTTTTGACCTCAAACGAGGCCTCAAAATTAACTCTGACTGATTCCCAAAAGAATGTTAAAGATGTCTCCCATGGAAAGCAAATGAAGTCATCTGGTCATCCTGGGACGAAAAGAAAACATAAAAAATTTCCACCTCAGTCAACAGAAAATGGCAACAAGGACTTAATGGAGTTCAGTGATGATGTGAGCTTGAAGATACTGTTGAAAGCAAGAAAGAGGAAGGTGAGGTTTATGTTTGAAGGAGACTCTCGGGCAGCAGAGATGGAATTTGAAAGACTTAGTAAAGCGAAGATTAAATTAGATAGCATGAAGCAAAAATTAATTGCAATTCAAAATAGAGGAAAAGGTTCAGATGAGCCCCATTTGAAAGAACCAACTGTAATATATGTACCGGTTGCAGAACTAAGAGAAAAAGTCTGA 2160 0.4032 MRDSDKKLNHRGSRKVSHLEAQSVQKRCLSFKFKKGSTKSQGKKQKLKSKSSTKRVGASLSRRKVTDSSNKGLSKDSSNKKIIIRRNLYKSTDGKLLKKPSSSKLQGENFSFSTENEVKDGNGEVKTQKLKRRRKKKRRRDNTELDEASRLQRRTRYLLIKMKLEQNLIDAYSGEGWKGQSREKIRPEKELQRAQKQILKCKLSIRDAIHQLDSLSSVGSIEDSVIASDGSVYHEHIFCAKCKLREAFPDNDIILCDGTCNRAFHQKCLDPPLDTKNIPPEDEGWFCKFCECKMDILEVVNAHLGTHFSMDCNWQDVFKEEATFPDGDTALLNPEEEWPSDDSEDDDYNPEKREDDHSISTEDIDDAASDDLSNSPCSLSLEGEYSAGKEGTGHESVNSCIDSDESGEIACGRRQRKAVDYKKLYDEMFGKDAPACEQVSEDEDWGPARRKRREKESDAVSTLMTLHESENNHPNTESEDIVKEVPSGTQIKRPCFRIPFDAVKKLRQAFAENELPPRSVKDSLSKELGLDAEKVSKWFKNARYLALKTRKQHTEGAEQLQSFMSRTSKDSRSQKLERAEVLTSNEASKLTLTDSQKNVKDVSHGKQMKSSGHPGTKRKHKKFPPQSTENGNKDLMEFSDDVSLKILLKARKRKVRFMFEGDSRAAEMEFERLSKAKIKLDSMKQKLIAIQNRGKGSDEPHLKEPTVIYVPVAELREKV 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach2g01542 719 ProSiteProfiles Zinc finger PHD-type profile. 236 293 IPR019787 -
Bach2g01542 719 Pfam Homeodomain 503 544 IPR001356 GO:0003677
Bach2g01542 719 MobiDBLite consensus disorder prediction 94 147 - -
Bach2g01542 719 Coils Coil 673 693 - -
Bach2g01542 719 Pfam PHD-finger 238 293 IPR019787 -
Bach2g01542 719 MobiDBLite consensus disorder prediction 1 78 - -
Bach2g01542 719 CDD PHD_PRHA_like 238 290 IPR045876 -
Bach2g01542 719 SMART PHD_3 238 291 IPR001965 -
Bach2g01542 719 CDD homeodomain 501 553 IPR001356 GO:0003677
Bach2g01542 719 MobiDBLite consensus disorder prediction 580 598 - -
Bach2g01542 719 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 230 287 IPR013083 -
Bach2g01542 719 MobiDBLite consensus disorder prediction 350 364 - -
Bach2g01542 719 MobiDBLite consensus disorder prediction 335 349 - -
Bach2g01542 719 MobiDBLite consensus disorder prediction 550 634 - -
Bach2g01542 719 SUPERFAMILY Homeodomain-like 492 554 IPR009057 -
Bach2g01542 719 FunFam pathogenesis-related homeodomain protein-like 230 290 - -
Bach2g01542 719 ProSiteProfiles 'Homeobox' domain profile. 489 549 IPR001356 GO:0003677
Bach2g01542 719 MobiDBLite consensus disorder prediction 435 461 - -
Bach2g01542 719 ProSitePatterns Zinc finger PHD-type signature. 239 290 IPR019786 -
Bach2g01542 719 MobiDBLite consensus disorder prediction 37 51 - -
Bach2g01542 719 Gene3D - 498 565 - -
Bach2g01542 719 MobiDBLite consensus disorder prediction 435 486 - -
Bach2g01542 719 SUPERFAMILY FYVE/PHD zinc finger 229 295 IPR011011 -
Bach2g01542 719 MobiDBLite consensus disorder prediction 52 77 - -
Bach2g01542 719 MobiDBLite consensus disorder prediction 1 21 - -
Bach2g01542 719 SMART HOX_1 491 553 IPR001356 GO:0003677
Bach2g01542 719 MobiDBLite consensus disorder prediction 96 118 - -
Bach2g01542 719 PANTHER POLYCOMB-LIKE TRANSCRIPTION FACTOR 33 718 - -
Bach2g01542 719 FunFam pathogenesis-related homeodomain protein 491 555 - -
Bach2g01542 719 MobiDBLite consensus disorder prediction 326 406 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach2g01542 Bach-Chr2 24317218 24321397 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach2g01542 138 559 Homeobox Transcription Factor Family AT4G29940 57.798 1.59e-156 470
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-PHD Bach2g01542 PHD 4.8e-11 CL0390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach2g01542 - - gmx:100787118 895.575
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach5g00834 5 5760890 5765604 Bach2g01542 2 24317218 24321397 BWGD
Bach2g01542 2 24317218 24321397 Bach2g01542 2 24317218 24321397 ECH