Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach2g01539 ATGACGGAGCAGACCAAGTTTAACGTGCTATGCAGCCTCTTCACATGGATACAGAGAAGCAAGTCCTCGGCTAAGAAGCGCTCCAAGTTCCGAAAATTCCTCGACTCCTTCTGCAAAGACAAGAACTACTTCGCTGCAATTCGCTTAATTCTTCCCAATCTCGATCGCGAGCGAGGCTCCTATGGACTCAAGGAGTCTGTTCTGGCTACTTCACTCATCGACGCTCTTGGCATGTCCAGGGATTCCGAGGATGCTCTTCGTCTCGTCAATTGGCGCAAAGGTGGTGCGAAAACCGGCGCTAATGCCGGAAACTTCGCCCTGGTCGCCGCAGAGGTGCTGCAACGTAGGCAAGGGATGCAATCTGGTGATTTGACGATAAAGGAGTTAAACGATCTGCTTGATCAATTGTCGTCAAGTGAAAACAGGGCCGAGAAGGCTTTGGTTCTTTCTACCCTTATCAAAAAGACAAATGCACAGGAAATGAAGTGGATTATCATGATAATTCTCAAAGATCTAAAGCTTGGAATTAGTGAAAAAAGCATCTTTAATGAATTCCATCCAGATGCTGAAGACATGTTTAATGTGACTTGTGACTTGAAACTAGTTTGTGAAAAGCTGAAGGATCGGAATCAACGCCATAAGCGACAGGACATTGAAGTTGGAAAAGCAGTGCGCCCTCAACTAGCTAAGAGAGTTGCTAATGCATCTGAAGCGTGGAAAAAGCTTCATGGGAAGGATGTGGTTGTAGAATGCAAATTTGATGGTGATCGCATCCAAATTCATAAAAATGGAGCAGAGATACATTTCTTTTCAAGGAACTTTCTTGATCACTCTGAATATGGACATGCAATGTCAGAGATCATAATACAAAACATTCTTGTGGATCGGTGTATACTTGATGGTGAAATGCTGGTCTGGGACACATTATTGAACCGTTTTGCTGAATTTGGTTCAAATCAGGAAATAGCCAAGGCAGCCAGGGACGGACTTGATAGTGATAGACAGTTATGCTGTATCCTTCTTGTACCTGAGTTGCTAGATGTTGGTTTTGATATACTTTATGTTGGAGACACTAGTGTGATTCACCAAAGCTTGAAGGAACGGCATGAACTTCTCCGTAAAGTTGTGAGGCCCTTGAAGGGTCGACTGGAAATTTTAGTACCCAATGGTGGTCTAAACACTCATCAGTCTTCTGGGGAGCCTCGTTGGTCATTTGTTGCTCGTAATGTGGATGAGGTTGAGAGATTTTTCAAAGAAACCATAGAGAATAGAGATGAAGGTATTGTTCTGAAGGACCTCGGTTCCAAATGGGAACCTAGTGATCGTAGCGGAAAATGGCTGAAGTTGAAGCCTGATTACGTACATCCTGGTTCTGATCTGGATGTACTTATCATAGGTGGTTATTATGGCTCGGGACGACGTGGAGGGGAGGTTGCTCAATTCTTGGTGGCCCTTGCAGAGCGCCCATCTCCAAATACACATCCCACAAAATTTATCTCCTTTTGTAGAGTTGGTACTGGACTTTCTGATGATGAGTTAGATGCTGTGGTGACCAAACTGAAACCTTATTTCAGGAAATATGAATATCTAAAAAAGAAGCCACCAAGTTTTTATCAGGTTACTAATCATTCAAAAGAAAGACCTGACGTGTGGGTTGAGAGCCCTGAAAAATCAATTATTCTATCTATAACCAGTGATATCCGAACTATAGAATCCGAGGTATTTGCTGCACCATACAGCTTAAGATTTCCTCGAATTGATAGGGTGAAATATGACAAGGCTTGGTATGAATGCCTCGATGTGCAATCATTTATAGAACTGGTGCATTCCAGCAATGGTACCACGCATAGGGGAACTGTACATGGCAGTAAGCAAGATAGTAAACCAAAACTCTTGAAATCCTCTAGGAGGGGAGAGAAGAATATGTCCATTGTCCCATCTCATTTAGTTCAGACTGATGTTTCCAGTGTTAAAGGGGGCTCCTTAATATTCTCAAATATGATGTTCTACTTTGTTAATGTGCCTCCATCTCATTCTCTTGATACCTTACGCATGATGGTTGCGGAGAATGGGGGAACTTTTTCAATGAATTTGAATAACTCAGTCACCCATTGTATTGCGGCAGATAGCAAGGGATTCAAATATGAAGCAGCCAAACGTCATGGTGATGTCATTCACTATACTTGGATATTAGATTGCTGCGCAGAAAAGAAGCTTGTCTGCTTACAGCCAAAGTACTTCCTTTTCCAATCTGAATCAACAAAAAAGAAGTTACAGGAAGAAATTGATGAGTTCTCAGACTCCTACTATATGGATATTGATATTGCAGACATCAAGCAACTCTTGAGCAATATTCATAGATCAGAAGATATCACCACTATTGACCATTACAGGAAAAAATACTGTCCAAAGGATAAGTGGTCTTACTTTCATGGATGCTCAATTTATTTCCATACTTCCATACCATCTGTGAAGGGAGATGGGGAAGTTCTGCTGGGACTTGCTCTGAGGAGATTGAAGCATGAAATTCTCATGGGTGGTGGCAAAGTTACCTATAGTCTCACTCGTGCTACCCATTTAGTGACCTTGTCAGTGCCAGGATATCATGTAGACTTCGAAAATATACTAAGAAGTTTCTCTTCATCGGAGAAGCAATTCCTTGGGAGCAAAATGTTGCATATAGTTGGGTCCCAGTGGTTAGAAGATTGTTTGGATAGTAACCAGAGACTACCGGAAGAAACATACAGCTTGAAGCCCCATGGGATAGATGAGTCAGCTACTGAAGAGTGTTCTGGCAAACATGACTTGGATTTACAACCCCATTCTGGTGGAGATAATTTAGAAGATCAGAATGTATCGCTTTTCTCTGATAAAGGAGGTAAACGTAGAAGTTTAAGAGCCCCTGGTGAAGAACATATGGAGATGCTGTCCTCACAGAAGGGTGGCAAAAGGAAAAGAGGAAGACCTGCAGGCAGAGGTATTAAAAAGGTAAAAACAGGTGCAAACCAAGCTCAAAGAACACGAGCACGAATCGGGAAAAGGCCTGCTAAAATATGTGAATATGAAACTGATGAAAGTGGTTCTCAAGACGATGGGGAGATTGACCCAAGAGAAGGAAGTTTTGATACTTACAATAAAGATTCAGAAACCCAGGAGACTGAGAAACGTCTGGAAGTCCCAGAGACAGAAATATTGGAAGGTTCTGAATCATCGGAAGGAGGCAAGGGGGTTAAGCAAGTGGGTTTGAAGGATATTGAACATGAAAAACAATCTGTTCCTGTAATTGACATGAAGCATGATGACGAAAAACATAAGCCTGAGAAGCTGGAAATTATGGGTGATCCAGTGCAGGCAATGTTATTTAACATGATTCCTAGCCTTGCAATTAAGAAAGTTGAGGAAACCTCAAGTCGTAATCTTGAAGGTGAGAAGGCACCAGAAAATTCCAGTGCAGAGCCTCAGCCTACAAAGAAAAAGAAAGTAAGCTACAAGGACGTTGCTAGTAAACTGCTAAAGGATTGGTAGAAAACCATATCCCAACTTTTTTGTACACTTGTCAAATGCCCTTGTCAAACATTGTAGAAAACCATGTGCTTTTTTTGTTTCGAAATAGTATGTTGTTGATTTGATGCATTTCTTTTACTTCCCACTGCTGACAATTGGAATTCCTTCCATATCAATAGCGG 3686 0.4183 MTEQTKFNVLCSLFTWIQRSKSSAKKRSKFRKFLDSFCKDKNYFAAIRLILPNLDRERGSYGLKESVLATSLIDALGMSRDSEDALRLVNWRKGGAKTGANAGNFALVAAEVLQRRQGMQSGDLTIKELNDLLDQLSSSENRAEKALVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFNEFHPDAEDMFNVTCDLKLVCEKLKDRNQRHKRQDIEVGKAVRPQLAKRVANASEAWKKLHGKDVVVECKFDGDRIQIHKNGAEIHFFSRNFLDHSEYGHAMSEIIIQNILVDRCILDGEMLVWDTLLNRFAEFGSNQEIAKAARDGLDSDRQLCCILLVPELLDVGFDILYVGDTSVIHQSLKERHELLRKVVRPLKGRLEILVPNGGLNTHQSSGEPRWSFVARNVDEVERFFKETIENRDEGIVLKDLGSKWEPSDRSGKWLKLKPDYVHPGSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPSPNTHPTKFISFCRVGTGLSDDELDAVVTKLKPYFRKYEYLKKKPPSFYQVTNHSKERPDVWVESPEKSIILSITSDIRTIESEVFAAPYSLRFPRIDRVKYDKAWYECLDVQSFIELVHSSNGTTHRGTVHGSKQDSKPKLLKSSRRGEKNMSIVPSHLVQTDVSSVKGGSLIFSNMMFYFVNVPPSHSLDTLRMMVAENGGTFSMNLNNSVTHCIAADSKGFKYEAAKRHGDVIHYTWILDCCAEKKLVCLQPKYFLFQSESTKKKLQEEIDEFSDSYYMDIDIADIKQLLSNIHRSEDITTIDHYRKKYCPKDKWSYFHGCSIYFHTSIPSVKGDGEVLLGLALRRLKHEILMGGGKVTYSLTRATHLVTLSVPGYHVDFENILRSFSSSEKQFLGSKMLHIVGSQWLEDCLDSNQRLPEETYSLKPHGIDESATEECSGKHDLDLQPHSGGDNLEDQNVSLFSDKGGKRRSLRAPGEEHMEMLSSQKGGKRKRGRPAGRGIKKVKTGANQAQRTRARIGKRPAKICEYETDESGSQDDGEIDPREGSFDTYNKDSETQETEKRLEVPETEILEGSESSEGGKGVKQVGLKDIEHEKQSVPVIDMKHDDEKHKPEKLEIMGDPVQAMLFNMIPSLAIKKVEETSSRNLEGEKAPENSSAEPQPTKKKKVSYKDVASKLLKDW 1174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach2g01539 1174 SMART BRCT_7 661 737 IPR001357 -
Bach2g01539 1174 SMART BRCT_7 807 907 IPR001357 -
Bach2g01539 1174 Pfam ATP dependent DNA ligase C terminal region 474 593 IPR012309 GO:0003910|GO:0006281|GO:0006310
Bach2g01539 1174 CDD BRCT_DNA_ligase_IV_rpt1 663 749 - -
Bach2g01539 1174 Gene3D - 455 614 IPR012340 -
Bach2g01539 1174 SUPERFAMILY ATP-dependent DNA ligase DNA-binding domain 3 208 IPR036599 GO:0003677|GO:0003910|GO:0006281|GO:0006310
Bach2g01539 1174 MobiDBLite consensus disorder prediction 1135 1165 - -
Bach2g01539 1174 FunFam DNA ligase 674 788 - -
Bach2g01539 1174 MobiDBLite consensus disorder prediction 621 637 - -
Bach2g01539 1174 SUPERFAMILY BRCT domain 798 919 IPR036420 -
Bach2g01539 1174 ProSiteProfiles BRCT domain profile. 659 747 IPR001357 -
Bach2g01539 1174 MobiDBLite consensus disorder prediction 614 638 - -
Bach2g01539 1174 Pfam DNA ligase IV 754 785 IPR021536 GO:0003910
Bach2g01539 1174 MobiDBLite consensus disorder prediction 1079 1108 - -
Bach2g01539 1174 Gene3D BRCT domain 805 917 IPR036420 -
Bach2g01539 1174 SUPERFAMILY DNA ligase/mRNA capping enzyme, catalytic domain 185 452 - -
Bach2g01539 1174 MobiDBLite consensus disorder prediction 1013 1063 - -
Bach2g01539 1174 Gene3D DNA ligase/mRNA capping enzyme 220 452 - -
Bach2g01539 1174 Pfam ATP dependent DNA ligase domain 226 450 IPR012310 GO:0003910|GO:0005524|GO:0006281|GO:0006310
Bach2g01539 1174 Gene3D BRCT domain 674 787 IPR036420 -
Bach2g01539 1174 MobiDBLite consensus disorder prediction 955 970 - -
Bach2g01539 1174 ProSiteProfiles BRCT domain profile. 805 917 IPR001357 -
Bach2g01539 1174 Pfam BRCT domain, a BRCA1 C-terminus domain 661 744 IPR001357 -
Bach2g01539 1174 ProSitePatterns ATP-dependent DNA ligase signature 2. 426 450 IPR016059 GO:0003909
Bach2g01539 1174 MobiDBLite consensus disorder prediction 924 942 - -
Bach2g01539 1174 ProSiteProfiles ATP-dependent DNA ligase family profile. 350 487 IPR012310 GO:0003910|GO:0005524|GO:0006281|GO:0006310
Bach2g01539 1174 NCBIfam ATP-dependent DNA ligase 61 608 IPR000977 GO:0003910|GO:0005524|GO:0071897
Bach2g01539 1174 SUPERFAMILY BRCT domain 663 749 IPR036420 -
Bach2g01539 1174 Pfam DNA ligase N terminus 7 186 IPR012308 GO:0003677|GO:0003910|GO:0006281|GO:0006310
Bach2g01539 1174 PANTHER DNA LIGASE 4 3 1167 IPR029710 GO:0003677|GO:0003910|GO:0005524|GO:0006281|GO:0051103
Bach2g01539 1174 Gene3D - 1 218 IPR036599 GO:0003677|GO:0003910|GO:0006281|GO:0006310
Bach2g01539 1174 Coils Coil 126 146 - -
Bach2g01539 1174 MobiDBLite consensus disorder prediction 924 1108 - -
Bach2g01539 1174 CDD Adenylation_DNA_ligase_IV 214 454 IPR044125 GO:0005524
Bach2g01539 1174 FunFam DNA ligase 1 218 - -
Bach2g01539 1174 ProSitePatterns ATP-dependent DNA ligase AMP-binding site. 250 258 IPR016059 GO:0003909
Bach2g01539 1174 FunFam DNA ligase 453 614 - -
Bach2g01539 1174 SUPERFAMILY Nucleic acid-binding proteins 458 609 IPR012340 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach2g01539 62 622 Core DNA Replication Machinery Family AT1G08130 23.974 1.95e-28 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach2g01539 K10777 - gmx:100816002 1765.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach2g01539 2 24284443 24296385 Bach2g01539 2 24284443 24296385 ECH