Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach2g01532 CACCACTGAAGCGGCAATACTGAAGATGAGTAAAGAGGAAGTTAAGGGAGGAGCTGTGGTTCCTGAATCTGTGTCGAAGAAGCTGAAAAGGAGTGAGGAATGGGCTCTGGCAAAAAAGCAGGAGCTTGAAGCTGCTAAGAAAGCAAGCTCTGAAAAACGAAAGTTGATCTACAACAGAGCCAAATTGTATGCCAAGGAGTATGATGAACAGCAAAAGGAGCTCATTAGATTGAAGCGTGAAGCCAAGCTTAAGGGTGGATTTTATGTCGACCCAGAAGTTAAGCTGCTGTTCATCATCAGGATCCGTGGTATCAATGCTATGAACCCACAAACAAGGAAGATTTTGCAGCTTCTTCGACTGAGACAGATTTTCAATGGCGTCTTTCTCAAGGTTAACAAAGCAACATTGAATATGCTCCACAGGGTAGAGCCTTATGTTACCTACGGATACCCTAATTTGAAGAGTGTTAGAGAACTGATCTACAAGAGAGGTTACGGGAAAGTTGACAAGCAGAGAATTGCTTTGACAGACAACTCTATTATTGATCGGGCTTTGGGCAAGCATGGGATTATTTGCATGGAAGACCTGATTCATGAGATTATGACCGTTGGACCCCACTTCAAGGAAGCAAACAACTTCCTATGGCCTTTCAAGCTCAAGGCACCTCTTGGTGGTTTGAAGAAGAAAAGAAATCATTATGTTGAAGGAGGTGATGCTGGAAACCGTGAAGATTATATCAATGAGCTCATCAGGAGGATGAATTAG 766 0.4308 MSKEEVKGGAVVPESVSKKLKRSEEWALAKKQELEAAKKASSEKRKLIYNRAKLYAKEYDEQQKELIRLKREAKLKGGFYVDPEVKLLFIIRIRGINAMNPQTRKILQLLRLRQIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVRELIYKRGYGKVDKQRIALTDNSIIDRALGKHGIICMEDLIHEIMTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNREDYINELIRRMN 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach2g01532 246 Gene3D - 192 246 IPR036919 -
Bach2g01532 246 Gene3D - 87 191 IPR036919 -
Bach2g01532 246 Pfam Ribosomal L30 N-terminal domain 12 83 IPR012988 -
Bach2g01532 246 NCBIfam 60S ribosomal protein uL30 13 246 IPR005998 GO:0000463|GO:0003735|GO:0022625
Bach2g01532 246 SUPERFAMILY Ribosomal protein L30p/L7e 87 246 IPR036919 -
Bach2g01532 246 CDD Ribosomal_L7_archeal_euk 87 246 IPR035808 -
Bach2g01532 246 ProSitePatterns Ribosomal protein L30 signature. 106 138 IPR018038 -
Bach2g01532 246 Pfam Ribosomal protein L30p/L7e 88 138 IPR016082 -
Bach2g01532 246 PANTHER 60S RIBOSOMAL PROTEIN L7 10 246 IPR039699 -
Bach2g01532 246 FunFam 60S ribosomal protein L7 192 246 - -
Bach2g01532 246 MobiDBLite consensus disorder prediction 1 23 - -
Bach2g01532 246 Coils Coil 52 76 - -
Bach2g01532 246 FunFam 60S ribosomal protein L7 87 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach2g01532 Bach-Chr2 24206283 24208762 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach2g01532 5 246 Cytoplasmic Ribosomal Protein Gene Family AT3G13580 83.058 7.02e-153 423
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach2g01532 K02937 - jre:109006184 402.519
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach2g01532 2 24206283 24208762 Bach2g01532 2 24206283 24208762 ECH