Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach2g01488 ATGTGGGGGGACGCCACGAACTGGGACGAAAATGCTTACAAGGAAAGCGTATTGAAAGAGAGGGATATTGAAACACGAACCATTTTCAGAACCGCTTGGGCTCCTACTGGCAGCCCTAGCCCGGATACTCTCGTCGTCGCCTGCAGTGACGGATCCATCGCCTCCTACTCTATCTCTTCCTGCATTTCCAAGCTCCCCTTTGGTTTTACCAATACCAAGACGCAAAAATCATTGGCTGAACCAAATTGCTTCTTTCAAGGGCATGACGGACCTGTGTATGATGTCAAGTTTTATGGTGAAAGTGAAGATACTCTGTTACTAAGTTGTGGTGATGATGGTCGGATTCAAGGTTGGAGATGGACAGAACTTACAAAATCAACCTTTTCTGGTTCTGCGCAAGCTAGAAATGGTATCAAGCCAATCATTGATTGGGTGAATCCGCAACACAAAGGCCCTTGGGGTGCCCTTTCATCTATCCCTGAGAATAATGCTCTTGCTGTTGATACTCAAGGTGGATCTGTTTTTGCTGCTTCTGGTGATTCTTGTGCACACTGTTGGGATGTGGAAACTGGCAAAGTAAAAATGTTATTCAAGGGGCACTCAGACTACTTGCATTGCATAGTTTCCCGCAACTCAGCCCATCAGATCATTACGGGTTCAGAGGATGGGACCGCACGAATCTGGGATTGCAAAAGTGGAATGTGCATCCAAGTGATTGATCCAGCAAAAGATTTGAAGTTAAAAGGATTCAGTTCATGGGTTAGTTGTGTTGCTTTGGATGCAAGTGAAAGCTGGTTGGCTTGCGGCAATGGTCGGAATATTTCAATATGGAACCTTCCTGCTTCAGAGTGCATATCAAAGATTTCAACATATGCTTCTGTACAGGACATGTTATTTGACAATAACCAAATACTGGCAGTTGGTGCTGATCCCCTGCTTAATCGCTTTGACATGAATGGTGTAATCCTTTCACAAATACAGTGTGCTCCATCATCATCATTTTCTGTTTCATTACATTCATCAGGGGTTATGGCAGTTGGAGGTTATGGATGTCTTGTGGATGTTATCTCACAATTTGGAAGCCACATTCTCATCGCCTTCGCTTTTCTCCGATCAACCAGCTTTCGTCATCGAAAAGTCATGGCAGCTTTGGCACCTGAAGGTTCACAGTTCGATGGTAAACAGTATGATGCCAAAATGTCCGAGTTACTTACCACTGATGGGCAGGATTTCTTCGCATCCTATGATGAGGTTTACGATAGTTTTGATGCTATGGGCTTGCAAGAGAATCTCCTAAGAGGCATTTATGCATATGGTTTTGAGAAACCATCAGCTATTCAGCAAAGGGGAATAGTTCCATTCTGCAAGGGACTTGATGTCATTCAACAGGCTCAATCTGGAACTGGAAAGACTGCAACTTTCTGCTCGGGGATTCTGCAGCAACTTGACTACAGTTTGACAGAATGTCAGGCCTTAGTTTTAGCACCAACTCGAGAGCTTGCTCAGCAGATTGAAAAGGTTATGCGAGCACTTGGAGATTATCTTGGTGTGAAGGTGCATGCTTGTGTGGGTGGAACCAGTGTTCGTGAAGACCAACGCATTCTATCAAGTGGTGTTCATGTTGTCGTTGGTACTCCTGGTCGTGTTTTTGATATGCTGCGCAGACAGTCACTTCGACCAGATTACATAAAGATGTTTGTATTGGATGAAGCAGATGAAATGCTTTCTCGAGGTTTTAAAGACCAGATCTATGATATTTTCCAGCTACTGCCAGCTAAGATTCAGGTGGGAGTTTTCTCTGCTACAATGCCTCCTGAGGCCCTTGAGATCACGAGGAAGTTTATGAACAAACCTGTGAGGATCCTTGTGAAGCGTGATGAGCTCACATTAGAGGGTATAAAGCAATTTCATGTCAATGTTGAGAGAGAGGAATGGAAGTTGGACACACTTTGTGATCTTTACGAGACATTGGCTATCACTCAGAGTGTCATTTTTGTCAACACAAGAAGGAAGGTTGATTGGCTTACCGACAAAATGCGAAGCCGGGACCACACAGTCTCTGCGACCCATGGAGACATGGACCAGAATACCAGAGACATCATCATGCGTGAATTTCGTTCTGGATCTTCTCGTGTCTTGATTACAACTGACCTTTTGGCTCGTGGTATTGATGTCCAGCAAGTGTCTCTTGTTATAAATTATGATCTTCCAACACAGCCTGAGAACTATCTCCATCGTATTGGACGTAGTGGAAGGTTTGGTAGGAAAGGTGTTGCCATCAACTTTGTGACAAAGGACGATGAGAGAATGCTGTTTGACATCCAGAGGTTTTATAATGTGGTAATTGAAGAGCTGCCATCAAATGTTGCTGAACTCCTCTGA 2382 0.4421 MWGDATNWDENAYKESVLKERDIETRTIFRTAWAPTGSPSPDTLVVACSDGSIASYSISSCISKLPFGFTNTKTQKSLAEPNCFFQGHDGPVYDVKFYGESEDTLLLSCGDDGRIQGWRWTELTKSTFSGSAQARNGIKPIIDWVNPQHKGPWGALSSIPENNALAVDTQGGSVFAASGDSCAHCWDVETGKVKMLFKGHSDYLHCIVSRNSAHQIITGSEDGTARIWDCKSGMCIQVIDPAKDLKLKGFSSWVSCVALDASESWLACGNGRNISIWNLPASECISKISTYASVQDMLFDNNQILAVGADPLLNRFDMNGVILSQIQCAPSSSFSVSLHSSGVMAVGGYGCLVDVISQFGSHILIAFAFLRSTSFRHRKVMAALAPEGSQFDGKQYDAKMSELLTTDGQDFFASYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYSLTECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEREEWKLDTLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTKDDERMLFDIQRFYNVVIEELPSNVAELL 793
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach2g01488 793 CDD DEADc_EIF4A 424 622 - -
Bach2g01488 793 PANTHER THO COMPLEX SUBUNIT 6 HOMOLOG 1 363 IPR042626 -
Bach2g01488 793 Pfam DEAD/DEAH box helicase 445 606 IPR011545 GO:0003676|GO:0005524
Bach2g01488 793 Gene3D - 629 793 IPR027417 -
Bach2g01488 793 Pfam WD domain, G-beta repeat 196 229 IPR001680 GO:0005515
Bach2g01488 793 Pfam WD domain, G-beta repeat 247 278 IPR001680 GO:0005515
Bach2g01488 793 ProSitePatterns DEAD-box subfamily ATP-dependent helicases signature. 567 575 IPR000629 -
Bach2g01488 793 CDD SF2_C_DEAD 633 763 - -
Bach2g01488 793 FunFam Eukaryotic initiation factor 4A-III 628 793 - -
Bach2g01488 793 Gene3D - 411 628 IPR027417 -
Bach2g01488 793 FunFam Eukaryotic initiation factor 4A-II 408 627 - -
Bach2g01488 793 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 489 774 IPR027417 -
Bach2g01488 793 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 632 793 IPR001650 -
Bach2g01488 793 Pfam Helicase conserved C-terminal domain 646 754 IPR001650 -
Bach2g01488 793 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 197 229 - -
Bach2g01488 793 SMART ultradead3 439 636 IPR014001 -
Bach2g01488 793 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 451 621 IPR014001 -
Bach2g01488 793 SMART WD40_4 14 57 IPR001680 GO:0005515
Bach2g01488 793 SMART WD40_4 78 119 IPR001680 GO:0005515
Bach2g01488 793 SMART WD40_4 240 278 IPR001680 GO:0005515
Bach2g01488 793 SMART WD40_4 190 229 IPR001680 GO:0005515
Bach2g01488 793 SMART WD40_4 152 187 IPR001680 GO:0005515
Bach2g01488 793 SMART helicmild6 673 754 IPR001650 -
Bach2g01488 793 Gene3D - 8 146 IPR015943 GO:0005515
Bach2g01488 793 Gene3D - 147 389 IPR015943 GO:0005515
Bach2g01488 793 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 420 448 IPR014014 GO:0003724
Bach2g01488 793 ProSiteProfiles Trp-Asp (WD) repeats profile. 85 118 IPR001680 GO:0005515
Bach2g01488 793 ProSiteProfiles Trp-Asp (WD) repeats profile. 197 238 IPR001680 GO:0005515
Bach2g01488 793 SUPERFAMILY WD40 repeat-like 37 372 IPR036322 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach2g01488 Bach-Chr2 23844545 23854180 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach2g01488 381 793 Eukaryotic Initiation Factors Gene Family AT1G72730 87.440 0.0 759
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach2g01488 K03257 - jre:109009115 1337.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach5g00884 5 6217519 6223488 Bach2g01488 2 23844545 23854180 BWGD