Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bach2g01476 | ATGGTTTGGTTTCAATGCGAGGATTGTGGAGACAACCTGAAGAAACCCAAGTTGCCGAATCATTTCAGAACCTGCTCTGCCCAAAAGTTGTCATGCATTGATTGTGGACAAATATTTGGTCGAGACACTGTTCAGGACCATACACAATGTATTACCGAAGCGGAAAAGTATGGGCCCAAAGGCCAAGGTAAATCTTCGAATGTTTCAGCTGCCAAGCCTAACAAGGATCCGAAGCAACGGCCTGAAGTTGATATCAATGTTGGGTTATCTGATCGACCACCATGGTTTTGTAGTCTTTGCAATACAAAAGCTACAAGTAAGCAAACAATTCTTCTCCATGCTGATGGAAAGAAACACAGGGCAAAAGCCCGAGCTTTCCATGCTGCCAACCAACAACTAAACCCAACAGACAAATCTAGTCCTAATGGGAAGCATACGGTGGACAATGCTCCTAATGATGAAGGACAAGAAGGAAAAAATTTAGAACAGCCAAAATTGAAAAATCCATCTGAACATGATGATTTGAAGCCTCGGGATGGAATTTTTCCGTCAAAGAAAAAGAGGAAACCTGATTTATTGGAGGATAAACCAACGGGTAAAAAGAGCAGGGATGACACTTCAGGTGATATGGGAAATGGGGAAGTAATTCAAGGGAAAGGAGCAGAAGAAGCAGAAAAAGTGAATCGTTTAAATAAGATAAAGTGGAAGAAGTTTATCAAATCGGCCTTGAAATCTCATCCTGATGGAACTTTGAAGATGAAGAAACTGAGAAAACTTGTCCTCAAAGCTCTGCAGGAATCTGGAATTGTAGTAGATGAAACTGAACTTAGTGAGGCACTTCAGCAAAAGATCAATTCAAGCTCAAGATTTGCTGTTGAGAACAAGTACGTGCGTTTGGTGGCCAAAGATTAA | 912 | 0.4123 | MVWFQCEDCGDNLKKPKLPNHFRTCSAQKLSCIDCGQIFGRDTVQDHTQCITEAEKYGPKGQGKSSNVSAAKPNKDPKQRPEVDINVGLSDRPPWFCSLCNTKATSKQTILLHADGKKHRAKARAFHAANQQLNPTDKSSPNGKHTVDNAPNDEGQEGKNLEQPKLKNPSEHDDLKPRDGIFPSKKKRKPDLLEDKPTGKKSRDDTSGDMGNGEVIQGKGAEEAEKVNRLNKIKWKKFIKSALKSHPDGTLKMKKLRKLVLKALQESGIVVDETELSEALQQKINSSSRFAVENKYVRLVAKD | 303 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bach2g01476 | 303 | FunFam | UBP1-associated proteins 1C | 89 | 132 | - | - | |
| Bach2g01476 | 303 | Gene3D | - | 1 | 50 | - | - | |
| Bach2g01476 | 303 | FunFam | cell growth-regulating nucleolar protein-like | 1 | 50 | - | - | |
| Bach2g01476 | 303 | Pfam | LYAR-type C2HC zinc finger | 30 | 57 | IPR014898 | - | |
| Bach2g01476 | 303 | SUPERFAMILY | beta-beta-alpha zinc fingers | 1 | 26 | IPR036236 | - | |
| Bach2g01476 | 303 | SUPERFAMILY | beta-beta-alpha zinc fingers | 30 | 58 | IPR036236 | - | |
| Bach2g01476 | 303 | SMART | ZnF_U1_5 | 92 | 126 | IPR003604 | GO:0003676|GO:0008270 | |
| Bach2g01476 | 303 | Gene3D | Classic Zinc Finger | 89 | 131 | - | - | |
| Bach2g01476 | 303 | ProSiteProfiles | Zinc finger C2HC LYAR-type profile. | 1 | 26 | - | - | |
| Bach2g01476 | 303 | PANTHER | CELL GROWTH-REGULATING NUCLEOLAR PROTEIN LYAR | 1 | 300 | IPR039999 | GO:0003677 | |
| Bach2g01476 | 303 | MobiDBLite | consensus disorder prediction | 129 | 222 | - | - | |
| Bach2g01476 | 303 | SUPERFAMILY | beta-beta-alpha zinc fingers | 85 | 129 | IPR036236 | - | |
| Bach2g01476 | 303 | MobiDBLite | consensus disorder prediction | 56 | 87 | - | - | |
| Bach2g01476 | 303 | ProSiteProfiles | Zinc finger C2HC LYAR-type profile. | 27 | 51 | - | - | |
| Bach2g01476 | 303 | Pfam | Zinc-finger of C2H2 type | 95 | 119 | - | - | |
| Bach2g01476 | 303 | MobiDBLite | consensus disorder prediction | 129 | 149 | - | - | |
| Bach2g01476 | 303 | MobiDBLite | consensus disorder prediction | 158 | 208 | - | - |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Bach2g01476 | 52 | 159 | C2H2 Transcription Factor Family | AT2G19380 | 41.284 | 3.34e-17 | 80.1 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bach2g01476 | K15263 | - | gmx:100790272 | 439.499 |