Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach2g01468 ATTTGTTTCTTCATGCCATATCAGATCCCAAAGGAATTGATTGAAGGTTTCAAAGGTTGCAATATTTTACACTGTACTCAAAGCGTATGATCGAGATCTGAGTAATGGCTGTGTAAGGTTAAATGAAGCTAACTTTGATGTTGAATCGTCCTGATATTGAATTCAATTGTCCTCAAGTTGATCACTCAATGGCTCGTGTTCCTTATCCTTTTGCTGACCCTTTTTATGGTGGTTCATTAGCTGCATATGGACCACAGGTTATTAATCAACCCCAAGTGGTGCCCCAGATGATGGGATTGTCATCCACAAGAGTTGCATTACCACTTGATCTTGCAGAAGATGGACCCATTTATGTGAATGCAAAACAATATCACGGTATACTGAGGAGGCGACAGTCGCGGGCAAAGCTGGAGGCTCAAAACAAACTCATCAAAAGCCGCAAGCCATATCTTCATGAGTCACGGCATCGTCATGCCCTAAATAGGGTTAGGGGATCTGGGGGACGCTTTCTCAGCAAGCAACAGCTTCAACAATCTAATCAAGAACTTGTCACCGGCACTCATTCTGGTTCAGATTGTGTCAACATATATCAAAAGAAGGATACATCAGAGGTAGAAAGTCATCCATCAAGAACCGGCGAAAATGCATCTTCCATTACAACTTGCTCCGACATGACAAGCTTATCCAGTGGCAGTGTCAATTTTAGGCAGCCAGAGCGCAAGTTCTTGGGGAGCTCTTCAAACATTGGTGGAGCATCACAGTGCAGTGGGGGACTCACCTTTAATGGAACCCAACAGCAACGAGCATCAATAGTCCGGTGAGAATAAATGATAACTTCACCGGTCTGGCAACTCATCCTTGGCTTTTGTCACTTTATTTCCTTGTGTGTTTCATGTGTTCCAAAAGTGGTATTTTACGAGACTCTGTGCTTAGCAATCAGACCTTTGCTACACCTTTGGATTGGATTGCCTTGTATTTTGAAGTTACTACTGCTTCCACACTGTTCTGTTGAACTGGATTAAAACAGCTTGTGCTTGAAATCAAACTTTGTCATCTATCA 1060 0.4274 MKLTLMLNRPDIEFNCPQVDHSMARVPYPFADPFYGGSLAAYGPQVINQPQVVPQMMGLSSTRVALPLDLAEDGPIYVNAKQYHGILRRRQSRAKLEAQNKLIKSRKPYLHESRHRHALNRVRGSGGRFLSKQQLQQSNQELVTGTHSGSDCVNIYQKKDTSEVESHPSRTGENASSITTCSDMTSLSSGSVNFRQPERKFLGSSSNIGGASQCSGGLTFNGTQQQRASIVR 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach2g01468 232 PRINTS CCAAT-binding transcription factor subunit B signature 106 129 IPR001289 GO:0003700|GO:0006355
Bach2g01468 232 PRINTS CCAAT-binding transcription factor subunit B signature 75 97 IPR001289 GO:0003700|GO:0006355
Bach2g01468 232 MobiDBLite consensus disorder prediction 168 182 - -
Bach2g01468 232 ProSitePatterns NF-YA/HAP2 subunit signature. 77 97 IPR018362 GO:0003677|GO:0016602
Bach2g01468 232 Gene3D - 72 134 - -
Bach2g01468 232 PANTHER TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED 12 195 IPR001289 GO:0003700|GO:0006355
Bach2g01468 232 MobiDBLite consensus disorder prediction 160 182 - -
Bach2g01468 232 Pfam CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B 75 129 IPR001289 GO:0003700|GO:0006355
Bach2g01468 232 SMART cbf3 71 132 IPR001289 GO:0003700|GO:0006355
Bach2g01468 232 ProSiteProfiles NF-YA/HAP2 family profile. 72 132 IPR001289 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach2g01468 Bach-Chr2 23705617 23708533 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach2g01468 22 194 CCAAT-HAP2 Transcription Factor Family AT1G17590 47.826 2.21e-41 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YA Bach2g01468 CBFB_NFYA 3.1e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach2g01468 K08064 - qsa:O6P43_002694 312.383