Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach2g01461 GGGAGCTCCACGTTACCGCGAAACTTCCAGTCTTCAATATGTCGTTTAATAAGGTGCCAGAGATACAATCGTAATTGTGAACGCCGCAGGTCTCGTTGTCTCTCGTTTTAAAAGTCTCAAACCCAGTGGATCCAAATCCAAAAATCCACTTTCTATTTTACCGCGAAGGCCCGGTGCTCTCTGCGCTCGCTCCGAAATTATCACTGTCTCTTTTGTTCCTTTCTATTTTGGGTAACAGCTCTGCAGCATAATCTCCGTAACCCTCACATAGCGGTTTTCCGTTCGAGTATGTCGGTGAATCTCACGCCGAATGCAATCCCGGCGATTGTCGCTGGCGACGTCAACTCGAAGCCACTGCTGCAGGTCTTGGATATCAAGCTGATTTCGAATAAGGCGCATCAGGAGAGGTACAGGCTTTTGCTTTCCGATGCCGTTTCGACTCAGCAGGCTATGCTCGCGACTCAGCTCAATGACCGAGTCAAAACCGGACGAGTTAAGCCTGGTTCCGTTGTTCAGTTGATTGAGTATATCTGCAGCCCTGTGCAGAACCGCAAGATTATTGTGGTACTCAACATGGAAACTATAATACCAGATTGTGAGATCATTGGCAATCCAAAGTCATTTGGGGAATCTGATTTAACAGCTCCGAAAGCATTACCCAATATGCAGCAGTCGTCTAAGGTTAATAATAATCATTTGGCCACTCAAAATCTAAGTCATAATGTGCAGAGTTTCCGACCAACTGTTCAACCTCCTTACCAACCACCTCCAGTTTATAAAAATCATGGAGCAATTTTGAAGAATGAGGCACTAGCACGAATCATTCCTATAGCTGCTTTAAATCCTTATCAGGGCCGGTGGGCTATCAAGGCAAGAGTAACTGCAAAAGGGGATCTGCGCCGCTATAACAATGCTCGTGGAGATGGGAAGGTCTTCTCATTCGACCTCCTTGATTCTGATGGAGGTGAAATACGAGTAACCTGCTTCAATGCTGTTGTTGATCGATTCTATGATGCAATTGAGGTAGGTAAAGTCTACTTGATATCCAAAGGTAGCTTAAAACCTGCACAGAAGAACTTCAACCATTTGAAGAATGAATGGGAAATACTTTTGGATTCAAATTCAACTGTTGAGCTTTGCCCCGATGAAGATGGTTCTATACCTAGACAGCAGTTCTCCTTCAGGCCAATCAGTGAAATTGAGAATGTTGAGAATAACTCCATACTTGATGTGATTGGGATTGTGGTATCTGTGAATCCGTCTGTTCCTATCTTGAGAAAGAATGGAATGGAAACCCAGAGAAGAGTTTTGAATCTAAAGGACTGGTCTGGTAGGAGTGTCGAGCTAACCTTTTGGGGTGATTTCTGCAATAGGGAGGGTCAGAAGTTGCAAGAGATGGTTGATACAGGGTTTTTCCCTGTTTTGGCAGTCAAAGCTGGGAAGGTTAATGATTTCAGTGGAAAATCTATAGGGACTATTTCTTCTACTCAGCTCTTTATGAACCCTGATTTCCCAGAGGCTCATAGATTAAGAGACTGGTTTGATCAAGGGGGAAAGGATGCTGCTTCTCTGTCCATTTCTAAGGATATAGCTCCTGGAGGATCTAAGAATGAGATACGAAAAACTGTGTCTCAGATCAAGGATGAAGGTCTGGGACGATCAGATAAGCCAGACTGGATAACAGTGAGGGCAACCATATCTTTCATCAAGACAGATACTTTTTGTTACACTGCTTGTCCCCTGATGATTGGAGATCGACAGTGCAATAAGAAAGTGACAAGGTCAGGAAACACAGGATGGCACTGTGACAGATGCAATCAAAAGTTTGAGGAGTGTGATTACCGATATCTTCTTCAGGCCCAAATTCTGGATCATACCGGAATAACTTGGGTAACTGCTTTCCAGGAATCCGGGGATGAGATTTTGGGTTATCCAGCAAAAGAACTTTACTTGTTGAAGTATGAACAGCAGGATGATGAGAAGTTTGGTGAAATAATCCGGAGTAGCCTTTTTAATCAATATTTGTTTAGGCTGAAAATCAAAGAGGAATTATACGGTGATGAACAGAGGGTGAAGATTACAGTAGTCAAGGCAGATAAGGTGAACTATACTTCAGAGAGTAGATATATGCTTGATTTGATTTCAAAGTTTTGCAGGTAA 2160 0.4319 MSVNLTPNAIPAIVAGDVNSKPLLQVLDIKLISNKAHQERYRLLLSDAVSTQQAMLATQLNDRVKTGRVKPGSVVQLIEYICSPVQNRKIIVVLNMETIIPDCEIIGNPKSFGESDLTAPKALPNMQQSSKVNNNHLATQNLSHNVQSFRPTVQPPYQPPPVYKNHGAILKNEALARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYDAIEVGKVYLISKGSLKPAQKNFNHLKNEWEILLDSNSTVELCPDEDGSIPRQQFSFRPISEIENVENNSILDVIGIVVSVNPSVPILRKNGMETQRRVLNLKDWSGRSVELTFWGDFCNREGQKLQEMVDTGFFPVLAVKAGKVNDFSGKSIGTISSTQLFMNPDFPEAHRLRDWFDQGGKDAASLSISKDIAPGGSKNEIRKTVSQIKDEGLGRSDKPDWITVRATISFIKTDTFCYTACPLMIGDRQCNKKVTRSGNTGWHCDRCNQKFEECDYRYLLQAQILDHTGITWVTAFQESGDEILGYPAKELYLLKYEQQDDEKFGEIIRSSLFNQYLFRLKIKEELYGDEQRVKITVVKADKVNYTSESRYMLDLISKFCR 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach2g01461 623 CDD RPA1_DBD_A 180 283 - -
Bach2g01461 623 FunFam Replication protein A subunit 4 113 - -
Bach2g01461 623 Pfam OB-fold nucleic acid binding domain 192 273 IPR004365 GO:0003676
Bach2g01461 623 Pfam Replication factor-A protein 1, N-terminal domain 5 99 IPR007199 GO:0003677|GO:0005634|GO:0006260
Bach2g01461 623 Pfam Replication factor-A C terminal domain 463 613 IPR013955 -
Bach2g01461 623 SUPERFAMILY Nucleic acid-binding proteins 444 621 IPR012340 -
Bach2g01461 623 FunFam Replication protein A subunit 290 428 - -
Bach2g01461 623 Gene3D - 290 429 IPR012340 -
Bach2g01461 623 FunFam Replication protein A subunit 177 286 - -
Bach2g01461 623 Gene3D - 177 287 IPR012340 -
Bach2g01461 623 FunFam Replication protein A subunit 429 621 - -
Bach2g01461 623 SUPERFAMILY Nucleic acid-binding proteins 178 290 IPR012340 -
Bach2g01461 623 CDD RPA1N 9 100 IPR007199 GO:0003677|GO:0005634|GO:0006260
Bach2g01461 623 Pfam Replication protein A OB domain 301 405 IPR031657 -
Bach2g01461 623 Gene3D - 430 622 IPR012340 -
Bach2g01461 623 NCBIfam replication factor-a protein 1 (rpa1) 4 620 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Bach2g01461 623 CDD RPA1_DBD_C 447 620 IPR047192 -
Bach2g01461 623 Gene3D - 3 113 IPR012340 -
Bach2g01461 623 CDD RPA1_DBD_B 312 419 - -
Bach2g01461 623 SUPERFAMILY Nucleic acid-binding proteins 295 423 IPR012340 -
Bach2g01461 623 SUPERFAMILY Nucleic acid-binding proteins 1 108 IPR012340 -
Bach2g01461 623 PANTHER REPLICATION FACTOR A 1, RFA1 191 598 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach2g01461 Bach-Chr2 23674246 23677260 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach2g01461 24 620 Core DNA Replication Machinery Family AT2G06510 72.123 0.0 926
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach2g01461 K07466 - zju:107409151 1043.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach2g01461 2 23674246 23677260 Bach2g01461 2 23674246 23677260 ECH