Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach2g01427 ATGCAGAAGTCGACTTTGCCACTGAAGAACGTGAAAAACGCGAATGAGAATAAGAAGAAGTTATTACACAGCAAGGAAGCATTGGTGAAGCTTTTAAGATGGCATTTTGGGCACCCTGAGTTTAGAGGCAAGCAATTGGATGCTATTCAAGCTGTACTCTCAGGAAGAGATTGTTTTTGTCTTATGCCAACTGGAGGAGGGAAGTCAATGTGTTATCAAATCCCTGCATTGGCTAAGACAGGAATTGTGCTTGTTGTTTGTCCTTTAATAGTGATGGCATTAAAGGGAAAAGGCATTGCTGCTGAATATCTCTCCTCGACACAGACATCAGATGCAAAAAATAAGATTCATGAGGATCTTGACTCTGGAAATCCTTCCATAAGGCTGCTATATGTGACTCCAGAATTGGTAGCGACACCAGGGTTTATGTCAAAGCTGACAAAGATTTATGCAAGGGGTTTATTGAGTCTCATTGCCATAGATGAGGCACATTGCATCTCAACTTGGGGCCATGATTTCAGCAGACCTAGCTATCGTAAGCTTTCATCTCTGAGAAGCCATGTCTCAGATGTACCCATATTGGCTCTGACTGCTACTGCTGCCCCTAAGGTTCAGAAGGATGTGGTAGAATCCTTGCACCTACACAATCCATTAATATTAAAGTCTTCTTTTAATCGTCCTAATATATATTATGAAGTTCGGTACAAAGATCTTTTGGATGATGCTTATGCTGATGTATCTAATATGCTCAAATCTAAGGGAAATGTCTGTGCAATAGTTTACTGCCTTGAACGTTCAACATGCGATGATTTGTCTGCTCATCTATCTCAATCTGGCATTTCCTGTGCTGCTTATCATGCTGGGTTAAATAATAAAGTTCGAACTTCTGTATTAGATGATTGGATTTCTTCTAAGATACAAGTAGTCGTTGCAACTGTTGCTTTTGGGTATGGAATTGATAGAAAGGATGTCAGAATTGTGTGCCATTTCAATATTCCAAAGTCAATGGAGGCATTCTATCAAGAGTCAGGAAGAGCAGGCCGTGATCAATTGCCCTCCATAAGTCTGTTATACTATGGAGTAGATGATCGTAAAAGAATGGAATTCATATTAAGCAATTCTGGAAGTAATAAGTCACGACCATCAAGCTCACAAGAAGAATCATCTAAAAGGTCCCTGACTGAATTCAATCAGATGGTTGAGTATTGTGAAGGATCTGGATGCCGAAGGAAAAAGATTCTTGAGAGTTTTGGTGAACAGGTAACTGTATCACTATGCAGAAAAACATGTGATGCCTGTAGACATCCAAACTTAGTTACCAGATATTTGGAGGATCTCAGAACAGCCTGTGCTTTTCGCCAGAGAAATGGTTCCTCTCGAGTTTTTATTACAAGCTCCACGGGTGCAGTTGAGGAGGAGCAGTTATCTGAATTCTGGAATCGTGATGAGGAAGCAAATGCGTCAGAGGAAGATATATCTGATTCTGATGATTGTAATGAGGCTGTCACCAACCTAGCCAGGTCAAAATCCCAATTCAGACTAGGAATAAATGAAAAGATGGCATTATTGCAGCGTGCGGAAGAAATTTTTTATCGAAATGAAAACAATGACAAAGAGAGCAACAAAGTTGACAAGAATGCTATATCTGATACAATCCGGGGAGCAAGCAGGGAAAGATTTCAAAATGCTCTAAAGCAGGCTCTGCAACGGCTTGAAGACTTAAAAATTGAAGTGGAAACATCAGCATATTTGCTTGAAGATGAGTGCTATAAAAAATATGGAAAGGCTGGGAAATCATTCTATTATTCACAAGTGGCAAGTACTGTAAGGTGGCTGTCAACTGCAAGTTCTACCGATCTGATAAATCGACTTGGTGTTAATGATGCTTCCCCATCAATGAATGCCTTGTCTGAAGCTGAATGCACACCTATAACACCACCTTCGTCAGATCATTGTGCAAAAGAAGCCGCTAGCAACTCTAGATCAGAAACGTCGTGTGCTTTGCCTGTTGGAAGTGCTTCCTTTAGTACAAAGTTGCCACCAATTCCATCCTTCTCTGAGTTTGTCAACAGTAAGAAGGCAAAGTGCAACCAACGAAATACCTCACAAAAGCACTCACTAGACAAGGCCATAAAGAGCCCCCAGAAGAGGATGAAGTTACAGTAG 2166 0.4072 MQKSTLPLKNVKNANENKKKLLHSKEALVKLLRWHFGHPEFRGKQLDAIQAVLSGRDCFCLMPTGGGKSMCYQIPALAKTGIVLVVCPLIVMALKGKGIAAEYLSSTQTSDAKNKIHEDLDSGNPSIRLLYVTPELVATPGFMSKLTKIYARGLLSLIAIDEAHCISTWGHDFSRPSYRKLSSLRSHVSDVPILALTATAAPKVQKDVVESLHLHNPLILKSSFNRPNIYYEVRYKDLLDDAYADVSNMLKSKGNVCAIVYCLERSTCDDLSAHLSQSGISCAAYHAGLNNKVRTSVLDDWISSKIQVVVATVAFGYGIDRKDVRIVCHFNIPKSMEAFYQESGRAGRDQLPSISLLYYGVDDRKRMEFILSNSGSNKSRPSSSQEESSKRSLTEFNQMVEYCEGSGCRRKKILESFGEQVTVSLCRKTCDACRHPNLVTRYLEDLRTACAFRQRNGSSRVFITSSTGAVEEEQLSEFWNRDEEANASEEDISDSDDCNEAVTNLARSKSQFRLGINEKMALLQRAEEIFYRNENNDKESNKVDKNAISDTIRGASRERFQNALKQALQRLEDLKIEVETSAYLLEDECYKKYGKAGKSFYYSQVASTVRWLSTASSTDLINRLGVNDASPSMNALSEAECTPITPPSSDHCAKEAASNSRSETSCALPVGSASFSTKLPPIPSFSEFVNSKKAKCNQRNTSQKHSLDKAIKSPQKRMKLQ 721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach2g01427 721 Gene3D - 226 452 IPR027417 -
Bach2g01427 721 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 49 218 IPR014001 -
Bach2g01427 721 NCBIfam RecQ family ATP-dependent DNA helicase 31 437 IPR004589 GO:0004386|GO:0006310
Bach2g01427 721 Gene3D - 3 225 IPR027417 -
Bach2g01427 721 Pfam RecQ zinc-binding 363 434 IPR032284 -
Bach2g01427 721 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 224 457 IPR027417 -
Bach2g01427 721 MobiDBLite consensus disorder prediction 693 721 - -
Bach2g01427 721 Pfam Helicase conserved C-terminal domain 246 348 IPR001650 -
Bach2g01427 721 CDD DEXHc_RecQ 30 225 - -
Bach2g01427 721 FunFam RecQ family DNA helicase 226 451 - -
Bach2g01427 721 Pfam DEAD/DEAH box helicase 45 206 IPR011545 GO:0003676|GO:0005524
Bach2g01427 721 Coils Coil 557 577 - -
Bach2g01427 721 CDD SF2_C_RecQ 226 359 - -
Bach2g01427 721 SMART helicmild6 269 350 IPR001650 -
Bach2g01427 721 MobiDBLite consensus disorder prediction 372 392 - -
Bach2g01427 721 PANTHER DNA HELICASE RECQ FAMILY MEMBER 18 618 - -
Bach2g01427 721 FunFam ATP-dependent DNA helicase RecQ 19 225 - -
Bach2g01427 721 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 24 219 IPR027417 -
Bach2g01427 721 SMART ultradead3 37 234 IPR014001 -
Bach2g01427 721 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 238 390 IPR001650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach2g01427 Bach-Chr2 23416423 23421940 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach2g01427 34 365 Eukaryotic Initiation Factors Gene Family AT3G19760 20.917 6.86e-09 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach2g01427 K10901 - gmx:100819601 1058.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach2g01427 2 23416423 23421940 Bach2g01427 2 23416423 23421940 ECH