Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach2g01412 ATGGCGATGAAGAAAAGCGAGAGGCTTTGTAAGGAAGTGAAGGATAAGAAGGATGCTCCTATGAACGATGAAAGCGAAGAACGCAAAATTTTTGCTTCTTGCTCTTTCTCCAGTCTAGGCCTCCACCCTACCATATGCGACCAGCTCCGAGAAAGGATGGGATATGAAGTTCCAACCTTGGTGCAAGCTCAAGCTATTCCCGTTATTCTCTCGGGGCATCATGTACTTGTTAATGCTGCCACTGGCACCGGGAAGACTGTTGCATACTTGGCTCCAATTATTCATCATCTACAGAATTATGATCATCGGATTGAGAGGTCTGATGGCACATTTGCGTTGGTTCTTGTACCAACGCGTGAGCTTTGTTTGCAGGTTTATGAAATTCTTCAGAAATTACTGCACCGGTTTCATTGGATTGTTCCTGGGTATATTATGGGTGGTGAAAATAGATCAAAGGAGAAAGCCAGGCTGCGCAAAGGCATATCTGTTCTTGTAGCAACACCTGGGCGCCTTTTGGACCACTTGAAGAATACATCATCATTCATATACTCAAAGTTACGCTGGATAATATTTGATGAAGCTGATCGGATTTTGGAATTAGGATTTGGAAAAGAAATAGAGGAAATACTAGTTCATTTAGATACAAGAAAAACAAATAATACAGCATCAAGATGCTCAGGGGTTTCAAGACAAAATTTGCTTTTATCAGCCACCTTAAATGAGAAAGTCAACCACCTTGCTAAAATTAGTCTGGAGAATCCAGTGACTATTGGTCTTGATGGTAAAACAGCAGAAAAAATATCAAAAATTGAAAGCGTTAGTCCTTCAGAATCTGGTGAAGACAATGAAGACCAGTATCCCAGTAAAATACCAACCTCTTCAATTGGAGATTATAAAGTCCCCACGCAATTGGTTCAGAGATATGTGAAAGTACCTTGTGGATCACGGCTACCTTCACTTCTTTCCATTCTGAAGTATCTTTTTGAAAGGGAAACCTCCCAAAAGATTGTGGTATTCTTTTCAACGTGTGATGCTGTAGACTTCCACTATTCTCTCTTAAGTGAGTTCCAATTCTCATTCTATCCACAAACAGAAGAAGAAAACAAACAGATGTTTCTTGGATGCAAAACTTTTCGGTTGCATGGGAATATGCAACAAGAGGATCGAAGAACCACTTTTCAGTCCTTTAAAACAGAGAAAACAGCTCTGCTCTTGTCTACTGATGTTGCTGCTAGAGGCTTAGATTTTCCCAAAGTTAGATGCATTGTACAATATGATTCTCCAGGGGAAGCTACTGAATATGTGCATAGAGTTGGTAGAACTGCTCGGATGGGTGAAAGAGGAGAGTCATTGTTATTTCTGCAGCCAGTTGAAATAGATTATTTACAACACTTGGAAAAACATGGTGTATCACTAACAGAGTTTCCTCTCCTCAAAGTGTTTGATAGTTTCCCGCTGTATGGTCAAAAGAACCATATCAAGAAGTTTGTTTATATCGAGTCACATCCCTGGGTGCTTTGCCTCCAGAAGGCTCTTGAATCCTTCATCATGTCCAAGCCCAAGATGGACAAACTTGCCAAGAGGGGATTTTGTTCTTGGATCCGTGCATATACAGCCCATCGTGGTGAGCTGAAGAGAATATTTATGATCAAGAAACTTCACTTAGGACATGTAGCCAAAAGTTTTGCATTAAATCAACAACCCTCCTTAGTTGGCAAATCATATAGGAAGCAAACTAAGAAGAGGAAGAGATTTCACAAGCAAACTGAGATTTCAAAAAAGAGAAAGGTTACTAGTGTGACGTAATGCAGACCTTGAAAGTGGGCTTATGGTATGAGTTGATGATAGTTCTTGTTGAATCTTGTTTGATGATGACAAATGGTGTCTATCTATATCTCTTTAAGGCCAAATCATCATCCTCACTGATTATACCTGGCTATTCTCCAAGAAGTCTCTCGCTTCTTTAAGTGTATCTGATAATCTGAGAGTGAAGTATTGCTGTAACATGAAGTGCTCGTCGTTCATTTCTACAGCCAGCATTGCCAAATGGCAATTTTTGCGGATATGCCTGTAGGCTACCTGTATTCTACTACAATATAATTGCTATTAAATTTATTCTTAAATGATGTTCTTTATGATTCAAC 2144 0.3969 MAMKKSERLCKEVKDKKDAPMNDESEERKIFASCSFSSLGLHPTICDQLRERMGYEVPTLVQAQAIPVILSGHHVLVNAATGTGKTVAYLAPIIHHLQNYDHRIERSDGTFALVLVPTRELCLQVYEILQKLLHRFHWIVPGYIMGGENRSKEKARLRKGISVLVATPGRLLDHLKNTSSFIYSKLRWIIFDEADRILELGFGKEIEEILVHLDTRKTNNTASRCSGVSRQNLLLSATLNEKVNHLAKISLENPVTIGLDGKTAEKISKIESVSPSESGEDNEDQYPSKIPTSSIGDYKVPTQLVQRYVKVPCGSRLPSLLSILKYLFERETSQKIVVFFSTCDAVDFHYSLLSEFQFSFYPQTEEENKQMFLGCKTFRLHGNMQQEDRRTTFQSFKTEKTALLLSTDVAARGLDFPKVRCIVQYDSPGEATEYVHRVGRTARMGERGESLLFLQPVEIDYLQHLEKHGVSLTEFPLLKVFDSFPLYGQKNHIKKFVYIESHPWVLCLQKALESFIMSKPKMDKLAKRGFCSWIRAYTAHRGELKRIFMIKKLHLGHVAKSFALNQQPSLVGKSYRKQTKKRKRFHKQTEISKKRKVTSVT 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach2g01412 601 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 66 257 IPR014001 -
Bach2g01412 601 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 319 492 IPR001650 -
Bach2g01412 601 CDD SF2_C_DEAD 304 454 - -
Bach2g01412 601 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 34 63 IPR014014 GO:0003724
Bach2g01412 601 PANTHER RNA HELICASE 21 573 - -
Bach2g01412 601 MobiDBLite consensus disorder prediction 575 601 - -
Bach2g01412 601 MobiDBLite consensus disorder prediction 575 591 - -
Bach2g01412 601 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 72 493 IPR027417 -
Bach2g01412 601 Pfam Domain of unknown function (DUF4217) 509 569 IPR025313 -
Bach2g01412 601 MobiDBLite consensus disorder prediction 1 24 - -
Bach2g01412 601 Gene3D - 314 598 IPR027417 -
Bach2g01412 601 MobiDBLite consensus disorder prediction 271 292 - -
Bach2g01412 601 Pfam DEAD/DEAH box helicase 60 245 IPR011545 GO:0003676|GO:0005524
Bach2g01412 601 Pfam Helicase conserved C-terminal domain 321 445 IPR001650 -
Bach2g01412 601 SMART ultradead3 54 270 IPR014001 -
Bach2g01412 601 CDD DEADc_DDX31 47 258 - -
Bach2g01412 601 SMART DUF4217_3 507 572 IPR025313 -
Bach2g01412 601 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 29 257 IPR027417 -
Bach2g01412 601 ProSitePatterns DEAD-box subfamily ATP-dependent helicases signature. 190 198 IPR000629 -
Bach2g01412 601 Gene3D - 2 260 IPR027417 -
Bach2g01412 601 SMART helicmild6 362 445 IPR001650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach2g01412 Bach-Chr2 23305306 23310236 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach2g01412 35 477 Eukaryotic Initiation Factors Gene Family AT3G19760 24.609 2.48e-32 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach2g01412 K14806 - gmx:100805157 933.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach2g01412 2 23305306 23310236 Bach2g01412 2 23305306 23310236 ECH