Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach2g01394 ATGACGAGCCTCGAGGAGCCACTGAATCGGCAAACAAGATCAAGCAAGAAGCCAAGAATGGTTGAGCCAGTGCAATTGCCTCTTTCAATTGAGGTTGTGGACGTTGAATCCTCTTACTTCACACCCATCTCAAACAAGGGCACCAACAAGTCCGATGCAATCTCCGTTGAGCAGTATCCCGATGACAGAGATCTCCAGCTCGCGATCATGGATTCTCTGGGCAAAACCAAGCCTGCCCTAGAAACCCTCATCGACCTTTCTGATGGTGATGACGATGATGAGGTGAGAATTCTAAAGTTTAAGCCCGAAAAAACCACTTTTGGAAAAAGAAGGAACTCGACAAACCCCTTTGTAAATTATGCTTTCATTAGTGAAAAAGGGGAGTCTTCAAATAGCCCACCTTTTGTCTGTGAAATTTGTACTGAGACCAAGACGGTACAGGAGTCATTCAGCATCAGTGGTTGCTCTCACGCTTATTGTACTGACTGTATAACTATGTATGTGGCATCTAAGATACAGGAAAATATCATTAACATTCGGTGCCCTGTATCTGAGTGCAAAGGGTTGTTGGAGCCTCATGATTGTCGTCCAATTCTTCCTGCTGAAGTGTTTGATAGGTGGGGTAACGCCATGTGCGAGGCTGTAATACTTGCTTCTGAGAAGTTCTATTGCCCATTCAAGAACTGCTCTGCACTACTTATTGATGATGGAGAAGAGGTTGTGAAGGAGTCAGAATGTCCAAATTGTAGGAGGTTCTTCTGTGCACAGTGTAAGGTGCCTTGGCATGCAGGGATTGATTGCACAGAGTTTCAGAAGTTGAACAAGGACGATAGAGAGAGGGAAGATATCCTGTTGATGGAGCTTGCCCAGAACAAGAAGTGGAGGAGGTGCCCTAAGTGCAGGTTCTACGTTGAGAAATCTGAGGGCTGCATGTATATGAGATGCAGGTGTGGAATTGCTTTCTGTTATAGCTGCGGAACTCTTGCCACGAGCACTTCGCATAACTGCGCCACGTGCAGACGCTAATGGCTTCACATTATTCTACAGGAGGTCATCCTGACTTACATGTACTTGATAGGAGGCATTATTGATCAATTATGTAAGTTTAGGGTGCAAAATATCAAGTAACAACATTAACGACTATAGGAATGGATTATCGCGTCTGAAAGTTGGGCTGTGGGACTCTGTTTGTGTGGAGACAGACGAAATT 1210 0.4488 MTSLEEPLNRQTRSSKKPRMVEPVQLPLSIEVVDVESSYFTPISNKGTNKSDAISVEQYPDDRDLQLAIMDSLGKTKPALETLIDLSDGDDDDEVRILKFKPEKTTFGKRRNSTNPFVNYAFISEKGESSNSPPFVCEICTETKTVQESFSISGCSHAYCTDCITMYVASKIQENIINIRCPVSECKGLLEPHDCRPILPAEVFDRWGNAMCEAVILASEKFYCPFKNCSALLIDDGEEVVKESECPNCRRFFCAQCKVPWHAGIDCTEFQKLNKDDREREDILLMELAQNKKWRRCPKCRFYVEKSEGCMYMRCRCGIAFCYSCGTLATSTSHNCATCRR 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach2g01394 341 SUPERFAMILY RING/U-box 279 340 - -
Bach2g01394 341 SMART ibrneu5 205 267 IPR002867 GO:0008270
Bach2g01394 341 SMART ibrneu5 277 339 IPR002867 GO:0008270
Bach2g01394 341 Gene3D - 265 341 - -
Bach2g01394 341 MobiDBLite consensus disorder prediction 1 20 - -
Bach2g01394 341 ProSiteProfiles Zinc finger RING-type profile. 137 185 IPR001841 -
Bach2g01394 341 FunFam RBR-type E3 ubiquitin transferase 132 218 - -
Bach2g01394 341 SUPERFAMILY RING/U-box 212 272 - -
Bach2g01394 341 CDD BRcat_RBR_unk 218 270 - -
Bach2g01394 341 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 131 219 IPR013083 -
Bach2g01394 341 ProSiteProfiles TRIAD supradomain profile. 133 341 IPR044066 -
Bach2g01394 341 FunFam RBR-type E3 ubiquitin transferase 269 341 - -
Bach2g01394 341 ProSitePatterns Zinc finger RING-type signature. 155 164 IPR017907 -
Bach2g01394 341 CDD Rcat_RBR_unk 293 327 - -
Bach2g01394 341 SMART ring_2 137 184 IPR001841 -
Bach2g01394 341 SMART ring_2 297 339 IPR001841 -
Bach2g01394 341 SUPERFAMILY RING/U-box 132 214 - -
Bach2g01394 341 PANTHER RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING 84 334 IPR031127 GO:0004842|GO:0016567
Bach2g01394 341 Pfam IBR domain, a half RING-finger domain 287 335 IPR002867 GO:0008270
Bach2g01394 341 Pfam IBR domain, a half RING-finger domain 213 267 IPR002867 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach2g01394 Bach-Chr2 23136317 23143013 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach2g01394 137 327 C3H Transcription Factor Family AT2G19610 28.922 1.19e-21 93.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach2g01394 K11975 - qsa:O6P43_021976 439.884
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach2g01394 2 23136317 23143013 Bach2g01394 2 23136317 23143013 ECH