Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach2g01389 ATGTCAATGGCAGCCATGGACGGTTACCAAGAGAATCTCCACTATGAGTGCAACCATACCAGATACCCTAACCTATGTGTACAAACCTTGATGGGAATGGGGTCAGGGAATCAAAGTGCTGATATCATATCACACCTTGTGATCAAGACGATATCTGAAACCAATTTACCAAGTTCATATTTTGCAGAATTTGGATCCCTTCATGAAGTTCAGGATGACCCACATTCCCAGTCTGTCAAAGGCTATTGCGAAGAGCTCATGAGCATGTCACTTAAAAGGCTAGACCAGGCCCTGAAATCCCTGAAATCCCCTCGAAGAAACAACCATGACATCCAAACGTGGCTAAGTGCTTCTCTGACTTTTCAACAAACTTGTAAAGACTTTGCAGATGCACACGGCCTTGGAAGAATCTCTAAGAAGATGGACTATCTCTCAGCACTGGCAAGTAACCCCTTAGCTCTGGTTAACCGAATCACCCACACTCCAAAGAGCGCAAAAGCTCGTCGGCTTCTTGCCAGCGAAGAAGAAGAAAAATTTCCCAAGTGGGTATCAGGCAGAGAGAGAAAGCTACTTCAAGCAACCACCATAAAAGCAAATGCCATAGTTGCACAAGATGGATCAGGTAACTATAAGACAATCTCACAGGCTATTCAGGCTGCTTCTGGATCGCGGTTTGTGATCTTTGTTAAGAAAGGAATCTATAAGGAGAAGATTCATACTAAGAAGGACGGTATCACCTTGATTGGTGAAGGCAAATATTCCACTATAATCGTCGGTGATGACAGCGTGAAAGGAGGCGCTTCCTTACCTGACACAGCCACATTCAGTTAG 831 0.444 MSMAAMDGYQENLHYECNHTRYPNLCVQTLMGMGSGNQSADIISHLVIKTISETNLPSSYFAEFGSLHEVQDDPHSQSVKGYCEELMSMSLKRLDQALKSLKSPRRNNHDIQTWLSASLTFQQTCKDFADAHGLGRISKKMDYLSALASNPLALVNRITHTPKSAKARRLLASEEEEKFPKWVSGRERKLLQATTIKANAIVAQDGSGNYKTISQAIQAASGSRFVIFVKKGIYKEKIHTKKDGITLIGEGKYSTIIVGDDSVKGGASLPDTATFS 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach2g01389 276 Gene3D Invertase/pectin methylesterase inhibitor family protein 13 160 IPR035513 -
Bach2g01389 276 Pfam Pectinesterase 199 275 IPR000070 GO:0030599|GO:0042545
Bach2g01389 276 FunFam Pectinesterase 10 159 - -
Bach2g01389 276 Gene3D - 193 276 IPR012334 -
Bach2g01389 276 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 13 159 IPR035513 -
Bach2g01389 276 PANTHER PECTINESTERASE 14 275 - -
Bach2g01389 276 NCBIfam pectinesterase inhibitor domain 11 158 IPR006501 GO:0004857
Bach2g01389 276 Pfam Plant invertase/pectin methylesterase inhibitor 17 154 IPR006501 GO:0004857
Bach2g01389 276 CDD PMEI-like_3 17 159 - -
Bach2g01389 276 SMART PMEI_2 8 154 IPR006501 GO:0004857
Bach2g01389 276 SUPERFAMILY Pectin lyase-like 194 275 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach2g01389 Bach-Chr2 23084268 23085438 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach2g01389 17 276 Carbohydrate Esterase AT3G49220 35.816 1.62e-34 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach2g01389 K01051 - tcc:18588205 333.569