Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach2g01388 ATGGTATTCCAGGATTTCGACCTCATATCAGAACGGCGTACAGCCGAGAGGAAACAAAAGCTTAAGAAGAGGATATTGATCGGCGTAATCTCTACCATTGTCCTTGCTGCTCTAATAGCTGCCGCAGTTTTCGTGGTCATCACGAAAGACGATGCCGACCACGGCAAGGGGAAGGACAAAGAATCTCCGTCGAAGGCGACTGCTTCCGGTAGCAAAGATGTATCACGTGGAGAGAAGATGGTGAAAGCTATGTGCAGCACCACAGATTACAAGAGCAAGTGTGAGAACTCCCTGGGTAGTGCAATGAAATCTGATCCTAAATTAAGCCAACCTAAAGATCTTCTCGAGGTTGCCATCAAAGCTGCCGAGGAAGCGATCAGTAAGGCCTTCAACAAAACGACGTCGCTGAAATTTGAATCTGAAAAGGAAAAAGGAGCATATGAAGATTGTAAGCAACTGATTGAAGATGCCAAGGAGGAAATAGGATTGTCTCTCAAAGAAGTTGGCAAAGATGAATTGAAAAAACTTGTGAACAAAACTGATGACGTGAGCAATTGGCTGAGTGCAGTCATGTCTTACCACCAAACATGCATTGACGGATTTCCAGATGGAAAATTAAAGACAGATATTCAGAACATCTTCAAGGATCCTAAGGAATTCGTTAGCAATGCACTTGCTATCATGTCGGATGTTGCTTCGTTGCTTTCTACGTTCCAATCAGTAACCGCCAGCACTGCTCGTCACTTGCTAGAAGGCAAGACCAGCTCTCCAGCTGGTGCTTTGGGCAGTGATGGGCTTCCTGATTGGATAAGCCACGACCAACGAAGGGTGTTGAAAGCGGCGGATGATAAGCCCACACCTAATGTCACCGTGGCCAAAGATGGCAGTGGAAACTTCAAAACCATCTCTGAAGCTTTAGCTGCCATCCCTGAAAAATATGATGGAAGATATGTGGTTTACGTTAAAGAAGGGGTATATGAGGAGACTGTGACAATAACAAAGACAATGGTAAATTTAACATTGTATGGCGATGGATCACAGAAGAGTGTCATCACCGGCAGCAAAAACTTTGTTGATGGAGTCAGAACTTTCCAAACCGCTACATTTGGTGAGTCCAAGTTCCCTCCTTAA 1131 0.4483 MVFQDFDLISERRTAERKQKLKKRILIGVISTIVLAALIAAAVFVVITKDDADHGKGKDKESPSKATASGSKDVSRGEKMVKAMCSTTDYKSKCENSLGSAMKSDPKLSQPKDLLEVAIKAAEEAISKAFNKTTSLKFESEKEKGAYEDCKQLIEDAKEEIGLSLKEVGKDELKKLVNKTDDVSNWLSAVMSYHQTCIDGFPDGKLKTDIQNIFKDPKEFVSNALAIMSDVASLLSTFQSVTASTARHLLEGKTSSPAGALGSDGLPDWISHDQRRVLKAADDKPTPNVTVAKDGSGNFKTISEALAAIPEKYDGRYVVYVKEGVYEETVTITKTMVNLTLYGDGSQKSVITGSKNFVDGVRTFQTATFGESKFPP 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach2g01388 376 Gene3D - 286 373 IPR012334 -
Bach2g01388 376 NCBIfam pectinesterase inhibitor domain 70 229 IPR006501 GO:0004857
Bach2g01388 376 Gene3D Invertase/pectin methylesterase inhibitor family protein 77 231 IPR035513 -
Bach2g01388 376 SMART PMEI_2 76 227 IPR006501 GO:0004857
Bach2g01388 376 Pfam Pectinesterase 288 370 IPR000070 GO:0030599|GO:0042545
Bach2g01388 376 Coils Coil 112 132 - -
Bach2g01388 376 Coils Coil 140 160 - -
Bach2g01388 376 PANTHER PECTINESTERASE 39 370 - -
Bach2g01388 376 CDD PMEI-like_3 83 229 - -
Bach2g01388 376 FunFam Pectinesterase 77 232 - -
Bach2g01388 376 Pfam Plant invertase/pectin methylesterase inhibitor 80 227 IPR006501 GO:0004857
Bach2g01388 376 MobiDBLite consensus disorder prediction 52 78 - -
Bach2g01388 376 SUPERFAMILY Pectin lyase-like 286 369 IPR011050 -
Bach2g01388 376 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 79 229 IPR035513 -
Bach2g01388 376 MobiDBLite consensus disorder prediction 52 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach2g01388 Bach-Chr2 23077526 23079041 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach2g01388 1 369 Carbohydrate Esterase AT2G26450 40.201 1.43e-91 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach2g01388 - - qsa:O6P43_003780 431.409