Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bach2g01318 | ATGGCAACGGCAGAGGCTGCTTCAGCTGCCCATGGTCCTCGATATGCACCTGATGATCCCACACTTCCAAAGCCCTGGAAGGGTTTGATTGATGGAAACACTGGTCTATTATACTATTGGAATCCTGAAACCAACATAACCCAATATGAAAAACCTGCAACATTGCCCACACCCTTGCCTGCGGGTCCACCTCCTGTGGCTCCTATACCAGCGGGTCATTCAACGCCACCTAGTGGGATGGTGGCGCAGCAAGGACAACAATTCATGCAAGGCTCACAATTTCAGGGACAGCAGGCGAGCCACCAGCCCCAACAGCATGGGCAAGCCATGCCACAACGGGAGTCTTCTCATGTGGCACAAGCTGCTGGACAGCAACAAAACATGCCGCCAGTTCAGTCGATGCCACAGCCTGGGTTGCATCAAGTTAGACAGCCGATGGAGCAGCCTCAGGGTCAGCAAATGGCACCATCTTCAAGCCTGCAAATGCATCATCAGATGCCACAACAAGTTATCCAGTCCCAACATTTTGGACAAGGAACAGGGCAGGATCATGGATCACATATGGTGCAACCACAAGCACATCAAATTCCTCATCATAACTTCCATTATATGTCATACCAGCAGACTCAAAACATGCTTCCTCCTGGGCAGCAAAACCCCCAGCAGACTCAAAACATGCACGGTCAGCCATTTGAAAATCTGCAAGAGTTTAAACCAGCATTCTCGAAGATAAAGGAAGGGGATTTTAAAGGTGCAAGTCAAGTTGGACTTTCGCCACCCCAATATCAACCGAAGGGCTCCATGTCTGTTCAAAGCAATCATAATATTCCTGCTGGAATCAGTTCTGTGCAGATGCATCAAGTAGGTGTTAATGCTGGCCAGCCACAACAATTTGGTGGCATTTCTAGCAGTGTGCAACAGTCACCGTCTGCAATGCAGTCACAGCAGGGTAGTTCTGATTTTGTTTACCCGCATGGCCCTAACTTTCAAAACCAGATGGGCCTAGGAATGATGCTTGGCCAGCCGTCCAATGCCCCCACAGTTGACCTAAAGACAGGACATGATGATAATTTACGTGGTAGAGCGGGGAATGAATATTACTATAACCGTAGCAAAGAGATGCCAGCAATGGGTCCTCAGCAGCCAAATGTTGCACCAATACCCATTTCAAGAAATCAGCAGGATATGAGGATTGGTAATGCCCCTTTTCCAAATGCTATACCTGGTGGAAATGGTTCAAGTGGTATCCCAGGGCATGCATTGCATAACATGTTCAATCCTTCAACAGGAGTACCTCCGCCACTCTCAAGCAACTCATTAATTAGGCCGCCTTATGCTGGATCTTCAGATGTTACTGATCTCTCACCTGCTGAAATTTACCGTCAGCAACATGAAGTTACAGCAACGGGTGATAACGTTCCACTGCCATTCATGACATTTGATGCCGCAGGATTCCCTCCAGAGATTTTGAGGGAGTTGTACTCTGCTGGCTTCTCGTCTCCCACACCAATCCAGGCTCAAACATGGCCTGTTGCCCTACAGGGCAGGGACATAGTGGCAATTGCCAAAACAGGCTCCGGAAAAACATTGGGCTATTTAATCCCTGCATTCATTCTACTCAGACAACGGTGCAATAATCCTGTGAATGGCCCAACAGTCTTGGTTTTGGCTCCAACACGTGAACTTGCAACACAGATTCAAGATGAGGCCATTAAATTTGGCCGATCTTCACGTGTCTCTTGCACGTGTTTGTACGGAGGAGCATCTAAAGCCCTTCAGCTAAAGGAGTTAGATCGCGGAGCAGACATTGTTGTTGCCACACCTGGTCGGCTCAATGACATACTTGAAATGAAGAAAATTGATTTTGGGCAAGTTTCACTTCTTGTGCTTGATGAGGCTGACCGAATGCTTGATATGGGTTTTGAGCCTCAAATCCGTAAGATTGTGAATGAAATACCACCGCGCAGACAAACTCTTATGTACACAGCAACCTGGCCAAAAGAAGTAAGAAAAATTGCCAGTGATCTTCTTGTTAATTCTGTCCAGGTTAACATTGGAAGTGTTGATGAGCTTGCTGCTAATAAAGCTATCACCCAGTATGTTGAAGTTGTCTCACAAATGGAGAAGGATAGGCGTGTAGAGCAGATCCTCAGATCCCAAGAACGAGGTTCTAAGGTCATAATATTTTGTTCCACGAAGAGGTTATGTGATCAGCTTGCTCGTAGCATTGGCCGCAATTTTGGGGCTGCTGCAATTCATGGAGACAAGTCTCAAGGTGAGAGAGATTGGGTTTTGAATCAGTTCCGAACAGGGAAGTCACCAGTTCTGGTTGCCACTGATGTTGCTGCACGTGGGCTTGACATTAAGGATATAAGGGTGGTGATCAACTATGATTTCCCCACAGGGATTGAGGACTATGTACATCGTATTGGAAGAACTGGAAGGGCTGGTGCTACTGGACTGTCGTACACCTTTTTCTCTGAGCAGGATTGGAAACATGCAGGTGATTTGATCAAAGTTCTGGAGGGTGCTAACCAGCATGTTCCTTTAGAGTTACGACAGATGACTTTGCGTGGACCATCAAACTTTGCAAAGGATCGAGGTGGGATGAACCGTTTTGATTCTGGTGGTCCGCTTGCTAGTCGTTGGGATTCTGGCGGTCGTGGTGGCATGAGGGATGGTGGGTTCGGCGGTCGTGGTGTTATGAGGGATGGCGGGTTCGGCGGTCGCGGTGGCATGAGGGATGGCGGGTTTGGCGGGCGCGGTGGCATGAGGGATGGCGGGTTTGGCGGTCGCGGTGGTAGTGTGCATGGCGGGAGAGGTGATTTCTTTTCTGGCAGAGGCAACAGAGGTCGGGGATCTGGTGGCCCTCGAGGTGGTCATGTTGGCTGGGGTCGGAGTGAACGTGGCCCACATGATCGGTACAATATAGATGGACGAGGACGAGCGCGTGGACGAGGAAGATTTGATAATAGAAGAGATGATAATACAAGAGATATTGCTCCCAGGAGTAGGGGCAGAAGTTATAGTCGTAGCCCCGATAGAGTTCGGACATGGGATTATAGCAGTAGCCGTAGCAGAAGTAGGAGCCGGAGTAGGAGCTGGAGCAGGGGTCGCAGCCGAAGCCGCAGTCGGTCCCGTGGTCGTAGTCGCAGCAGAAGCCGTAGTTGGTCCCATGGTCGTCGTAGTCGCAGCTATAGTAGGAGCCGGAGCCGCAGTTGTGACCGTAGAAGTCGAAGTTACAGCCGCAGTCGCAGTCGTAGCCGCAGCTATGATAGACTTGATAGGTCGGATCAACAGACCTCTGATCTGAAGGATCCCAGGGCGCCTGATGTTGAAACTTCTGAACTAAGATTGGCTCCTGCGTCTCCAACCACGCAAGGCAATTCAAATTTTGGAACCAAATTTGTAGAGCAGCTGTCAGTTGTTGGGGGTACTGAGCCAGAGAATCCCGAGGCTGCTGCCGATCTTGGTCATCATTCAGCTTCTGACATTTGA | 3498 | 0.4937 | MATAEAASAAHGPRYAPDDPTLPKPWKGLIDGNTGLLYYWNPETNITQYEKPATLPTPLPAGPPPVAPIPAGHSTPPSGMVAQQGQQFMQGSQFQGQQASHQPQQHGQAMPQRESSHVAQAAGQQQNMPPVQSMPQPGLHQVRQPMEQPQGQQMAPSSSLQMHHQMPQQVIQSQHFGQGTGQDHGSHMVQPQAHQIPHHNFHYMSYQQTQNMLPPGQQNPQQTQNMHGQPFENLQEFKPAFSKIKEGDFKGASQVGLSPPQYQPKGSMSVQSNHNIPAGISSVQMHQVGVNAGQPQQFGGISSSVQQSPSAMQSQQGSSDFVYPHGPNFQNQMGLGMMLGQPSNAPTVDLKTGHDDNLRGRAGNEYYYNRSKEMPAMGPQQPNVAPIPISRNQQDMRIGNAPFPNAIPGGNGSSGIPGHALHNMFNPSTGVPPPLSSNSLIRPPYAGSSDVTDLSPAEIYRQQHEVTATGDNVPLPFMTFDAAGFPPEILRELYSAGFSSPTPIQAQTWPVALQGRDIVAIAKTGSGKTLGYLIPAFILLRQRCNNPVNGPTVLVLAPTRELATQIQDEAIKFGRSSRVSCTCLYGGASKALQLKELDRGADIVVATPGRLNDILEMKKIDFGQVSLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIASDLLVNSVQVNIGSVDELAANKAITQYVEVVSQMEKDRRVEQILRSQERGSKVIIFCSTKRLCDQLARSIGRNFGAAAIHGDKSQGERDWVLNQFRTGKSPVLVATDVAARGLDIKDIRVVINYDFPTGIEDYVHRIGRTGRAGATGLSYTFFSEQDWKHAGDLIKVLEGANQHVPLELRQMTLRGPSNFAKDRGGMNRFDSGGPLASRWDSGGRGGMRDGGFGGRGVMRDGGFGGRGGMRDGGFGGRGGMRDGGFGGRGGSVHGGRGDFFSGRGNRGRGSGGPRGGHVGWGRSERGPHDRYNIDGRGRARGRGRFDNRRDDNTRDIAPRSRGRSYSRSPDRVRTWDYSSSRSRSRSRSRSWSRGRSRSRSRSRGRSRSRSRSWSHGRRSRSYSRSRSRSCDRRSRSYSRSRSRSRSYDRLDRSDQQTSDLKDPRAPDVETSELRLAPASPTTQGNSNFGTKFVEQLSVVGGTEPENPEAAADLGHHSASDI | 1165 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bach2g01318 | 1165 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 549 | 832 | IPR027417 | - | |
Bach2g01318 | 1165 | CDD | WW | 23 | 52 | IPR001202 | GO:0005515 | |
Bach2g01318 | 1165 | Gene3D | - | 454 | 686 | IPR027417 | - | |
Bach2g01318 | 1165 | MobiDBLite | consensus disorder prediction | 1119 | 1137 | - | - | |
Bach2g01318 | 1165 | MobiDBLite | consensus disorder prediction | 861 | 1165 | - | - | |
Bach2g01318 | 1165 | FunFam | ATP-dependent RNA helicase RhlB | 687 | 859 | - | - | |
Bach2g01318 | 1165 | Pfam | Helicase conserved C-terminal domain | 709 | 817 | IPR001650 | - | |
Bach2g01318 | 1165 | MobiDBLite | consensus disorder prediction | 1068 | 1113 | - | - | |
Bach2g01318 | 1165 | Pfam | WW domain | 22 | 52 | IPR001202 | GO:0005515 | |
Bach2g01318 | 1165 | Gene3D | - | 687 | 858 | IPR027417 | - | |
Bach2g01318 | 1165 | MobiDBLite | consensus disorder prediction | 77 | 170 | - | - | |
Bach2g01318 | 1165 | ProSitePatterns | DEAD-box subfamily ATP-dependent helicases signature. | 629 | 637 | IPR000629 | - | |
Bach2g01318 | 1165 | MobiDBLite | consensus disorder prediction | 965 | 1027 | - | - | |
Bach2g01318 | 1165 | FunFam | probable ATP-dependent RNA helicase DDX17 | 444 | 686 | - | - | |
Bach2g01318 | 1165 | SMART | helicmild6 | 733 | 817 | IPR001650 | - | |
Bach2g01318 | 1165 | SMART | ultradead3 | 497 | 700 | IPR014001 | - | |
Bach2g01318 | 1165 | CDD | SF2_C_DEAD | 697 | 826 | - | - | |
Bach2g01318 | 1165 | MobiDBLite | consensus disorder prediction | 1 | 27 | - | - | |
Bach2g01318 | 1165 | MobiDBLite | consensus disorder prediction | 300 | 319 | - | - | |
Bach2g01318 | 1165 | Pfam | DEAD/DEAH box helicase | 502 | 672 | IPR011545 | GO:0003676|GO:0005524 | |
Bach2g01318 | 1165 | MobiDBLite | consensus disorder prediction | 1030 | 1067 | - | - | |
Bach2g01318 | 1165 | MobiDBLite | consensus disorder prediction | 52 | 170 | - | - | |
Bach2g01318 | 1165 | SMART | ww_5 | 21 | 54 | IPR001202 | GO:0005515 | |
Bach2g01318 | 1165 | ProSiteProfiles | Superfamilies 1 and 2 helicase C-terminal domain profile. | 712 | 856 | IPR001650 | - | |
Bach2g01318 | 1165 | ProSiteProfiles | DEAD-box RNA helicase Q motif profile. | 478 | 506 | IPR014014 | GO:0003724 | |
Bach2g01318 | 1165 | ProSiteProfiles | Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. | 509 | 683 | IPR014001 | - | |
Bach2g01318 | 1165 | ProSiteProfiles | WW/rsp5/WWP domain profile. | 20 | 54 | IPR001202 | GO:0005515 | |
Bach2g01318 | 1165 | MobiDBLite | consensus disorder prediction | 56 | 72 | - | - | |
Bach2g01318 | 1165 | ProSitePatterns | WW/rsp5/WWP domain signature. | 26 | 52 | IPR001202 | GO:0005515 | |
Bach2g01318 | 1165 | SUPERFAMILY | WW domain | 17 | 53 | IPR036020 | GO:0005515 | |
Bach2g01318 | 1165 | PANTHER | ATP-DEPENDENT RNA HELICASE DBP3 | 456 | 856 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Bach2g01318 | Bach-Chr2 | 22641467 | 22647081 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Bach2g01318 | 466 | 864 | Eukaryotic Initiation Factors Gene Family | AT3G19760 | 33.750 | 2.42e-65 | 225 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bach2g01318 | K12823 | - | gmx:100807830 | 1248.03 |