Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach2g01318 ATGGCAACGGCAGAGGCTGCTTCAGCTGCCCATGGTCCTCGATATGCACCTGATGATCCCACACTTCCAAAGCCCTGGAAGGGTTTGATTGATGGAAACACTGGTCTATTATACTATTGGAATCCTGAAACCAACATAACCCAATATGAAAAACCTGCAACATTGCCCACACCCTTGCCTGCGGGTCCACCTCCTGTGGCTCCTATACCAGCGGGTCATTCAACGCCACCTAGTGGGATGGTGGCGCAGCAAGGACAACAATTCATGCAAGGCTCACAATTTCAGGGACAGCAGGCGAGCCACCAGCCCCAACAGCATGGGCAAGCCATGCCACAACGGGAGTCTTCTCATGTGGCACAAGCTGCTGGACAGCAACAAAACATGCCGCCAGTTCAGTCGATGCCACAGCCTGGGTTGCATCAAGTTAGACAGCCGATGGAGCAGCCTCAGGGTCAGCAAATGGCACCATCTTCAAGCCTGCAAATGCATCATCAGATGCCACAACAAGTTATCCAGTCCCAACATTTTGGACAAGGAACAGGGCAGGATCATGGATCACATATGGTGCAACCACAAGCACATCAAATTCCTCATCATAACTTCCATTATATGTCATACCAGCAGACTCAAAACATGCTTCCTCCTGGGCAGCAAAACCCCCAGCAGACTCAAAACATGCACGGTCAGCCATTTGAAAATCTGCAAGAGTTTAAACCAGCATTCTCGAAGATAAAGGAAGGGGATTTTAAAGGTGCAAGTCAAGTTGGACTTTCGCCACCCCAATATCAACCGAAGGGCTCCATGTCTGTTCAAAGCAATCATAATATTCCTGCTGGAATCAGTTCTGTGCAGATGCATCAAGTAGGTGTTAATGCTGGCCAGCCACAACAATTTGGTGGCATTTCTAGCAGTGTGCAACAGTCACCGTCTGCAATGCAGTCACAGCAGGGTAGTTCTGATTTTGTTTACCCGCATGGCCCTAACTTTCAAAACCAGATGGGCCTAGGAATGATGCTTGGCCAGCCGTCCAATGCCCCCACAGTTGACCTAAAGACAGGACATGATGATAATTTACGTGGTAGAGCGGGGAATGAATATTACTATAACCGTAGCAAAGAGATGCCAGCAATGGGTCCTCAGCAGCCAAATGTTGCACCAATACCCATTTCAAGAAATCAGCAGGATATGAGGATTGGTAATGCCCCTTTTCCAAATGCTATACCTGGTGGAAATGGTTCAAGTGGTATCCCAGGGCATGCATTGCATAACATGTTCAATCCTTCAACAGGAGTACCTCCGCCACTCTCAAGCAACTCATTAATTAGGCCGCCTTATGCTGGATCTTCAGATGTTACTGATCTCTCACCTGCTGAAATTTACCGTCAGCAACATGAAGTTACAGCAACGGGTGATAACGTTCCACTGCCATTCATGACATTTGATGCCGCAGGATTCCCTCCAGAGATTTTGAGGGAGTTGTACTCTGCTGGCTTCTCGTCTCCCACACCAATCCAGGCTCAAACATGGCCTGTTGCCCTACAGGGCAGGGACATAGTGGCAATTGCCAAAACAGGCTCCGGAAAAACATTGGGCTATTTAATCCCTGCATTCATTCTACTCAGACAACGGTGCAATAATCCTGTGAATGGCCCAACAGTCTTGGTTTTGGCTCCAACACGTGAACTTGCAACACAGATTCAAGATGAGGCCATTAAATTTGGCCGATCTTCACGTGTCTCTTGCACGTGTTTGTACGGAGGAGCATCTAAAGCCCTTCAGCTAAAGGAGTTAGATCGCGGAGCAGACATTGTTGTTGCCACACCTGGTCGGCTCAATGACATACTTGAAATGAAGAAAATTGATTTTGGGCAAGTTTCACTTCTTGTGCTTGATGAGGCTGACCGAATGCTTGATATGGGTTTTGAGCCTCAAATCCGTAAGATTGTGAATGAAATACCACCGCGCAGACAAACTCTTATGTACACAGCAACCTGGCCAAAAGAAGTAAGAAAAATTGCCAGTGATCTTCTTGTTAATTCTGTCCAGGTTAACATTGGAAGTGTTGATGAGCTTGCTGCTAATAAAGCTATCACCCAGTATGTTGAAGTTGTCTCACAAATGGAGAAGGATAGGCGTGTAGAGCAGATCCTCAGATCCCAAGAACGAGGTTCTAAGGTCATAATATTTTGTTCCACGAAGAGGTTATGTGATCAGCTTGCTCGTAGCATTGGCCGCAATTTTGGGGCTGCTGCAATTCATGGAGACAAGTCTCAAGGTGAGAGAGATTGGGTTTTGAATCAGTTCCGAACAGGGAAGTCACCAGTTCTGGTTGCCACTGATGTTGCTGCACGTGGGCTTGACATTAAGGATATAAGGGTGGTGATCAACTATGATTTCCCCACAGGGATTGAGGACTATGTACATCGTATTGGAAGAACTGGAAGGGCTGGTGCTACTGGACTGTCGTACACCTTTTTCTCTGAGCAGGATTGGAAACATGCAGGTGATTTGATCAAAGTTCTGGAGGGTGCTAACCAGCATGTTCCTTTAGAGTTACGACAGATGACTTTGCGTGGACCATCAAACTTTGCAAAGGATCGAGGTGGGATGAACCGTTTTGATTCTGGTGGTCCGCTTGCTAGTCGTTGGGATTCTGGCGGTCGTGGTGGCATGAGGGATGGTGGGTTCGGCGGTCGTGGTGTTATGAGGGATGGCGGGTTCGGCGGTCGCGGTGGCATGAGGGATGGCGGGTTTGGCGGGCGCGGTGGCATGAGGGATGGCGGGTTTGGCGGTCGCGGTGGTAGTGTGCATGGCGGGAGAGGTGATTTCTTTTCTGGCAGAGGCAACAGAGGTCGGGGATCTGGTGGCCCTCGAGGTGGTCATGTTGGCTGGGGTCGGAGTGAACGTGGCCCACATGATCGGTACAATATAGATGGACGAGGACGAGCGCGTGGACGAGGAAGATTTGATAATAGAAGAGATGATAATACAAGAGATATTGCTCCCAGGAGTAGGGGCAGAAGTTATAGTCGTAGCCCCGATAGAGTTCGGACATGGGATTATAGCAGTAGCCGTAGCAGAAGTAGGAGCCGGAGTAGGAGCTGGAGCAGGGGTCGCAGCCGAAGCCGCAGTCGGTCCCGTGGTCGTAGTCGCAGCAGAAGCCGTAGTTGGTCCCATGGTCGTCGTAGTCGCAGCTATAGTAGGAGCCGGAGCCGCAGTTGTGACCGTAGAAGTCGAAGTTACAGCCGCAGTCGCAGTCGTAGCCGCAGCTATGATAGACTTGATAGGTCGGATCAACAGACCTCTGATCTGAAGGATCCCAGGGCGCCTGATGTTGAAACTTCTGAACTAAGATTGGCTCCTGCGTCTCCAACCACGCAAGGCAATTCAAATTTTGGAACCAAATTTGTAGAGCAGCTGTCAGTTGTTGGGGGTACTGAGCCAGAGAATCCCGAGGCTGCTGCCGATCTTGGTCATCATTCAGCTTCTGACATTTGA 3498 0.4937 MATAEAASAAHGPRYAPDDPTLPKPWKGLIDGNTGLLYYWNPETNITQYEKPATLPTPLPAGPPPVAPIPAGHSTPPSGMVAQQGQQFMQGSQFQGQQASHQPQQHGQAMPQRESSHVAQAAGQQQNMPPVQSMPQPGLHQVRQPMEQPQGQQMAPSSSLQMHHQMPQQVIQSQHFGQGTGQDHGSHMVQPQAHQIPHHNFHYMSYQQTQNMLPPGQQNPQQTQNMHGQPFENLQEFKPAFSKIKEGDFKGASQVGLSPPQYQPKGSMSVQSNHNIPAGISSVQMHQVGVNAGQPQQFGGISSSVQQSPSAMQSQQGSSDFVYPHGPNFQNQMGLGMMLGQPSNAPTVDLKTGHDDNLRGRAGNEYYYNRSKEMPAMGPQQPNVAPIPISRNQQDMRIGNAPFPNAIPGGNGSSGIPGHALHNMFNPSTGVPPPLSSNSLIRPPYAGSSDVTDLSPAEIYRQQHEVTATGDNVPLPFMTFDAAGFPPEILRELYSAGFSSPTPIQAQTWPVALQGRDIVAIAKTGSGKTLGYLIPAFILLRQRCNNPVNGPTVLVLAPTRELATQIQDEAIKFGRSSRVSCTCLYGGASKALQLKELDRGADIVVATPGRLNDILEMKKIDFGQVSLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIASDLLVNSVQVNIGSVDELAANKAITQYVEVVSQMEKDRRVEQILRSQERGSKVIIFCSTKRLCDQLARSIGRNFGAAAIHGDKSQGERDWVLNQFRTGKSPVLVATDVAARGLDIKDIRVVINYDFPTGIEDYVHRIGRTGRAGATGLSYTFFSEQDWKHAGDLIKVLEGANQHVPLELRQMTLRGPSNFAKDRGGMNRFDSGGPLASRWDSGGRGGMRDGGFGGRGVMRDGGFGGRGGMRDGGFGGRGGMRDGGFGGRGGSVHGGRGDFFSGRGNRGRGSGGPRGGHVGWGRSERGPHDRYNIDGRGRARGRGRFDNRRDDNTRDIAPRSRGRSYSRSPDRVRTWDYSSSRSRSRSRSRSWSRGRSRSRSRSRGRSRSRSRSWSHGRRSRSYSRSRSRSCDRRSRSYSRSRSRSRSYDRLDRSDQQTSDLKDPRAPDVETSELRLAPASPTTQGNSNFGTKFVEQLSVVGGTEPENPEAAADLGHHSASDI 1165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach2g01318 1165 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 549 832 IPR027417 -
Bach2g01318 1165 CDD WW 23 52 IPR001202 GO:0005515
Bach2g01318 1165 Gene3D - 454 686 IPR027417 -
Bach2g01318 1165 MobiDBLite consensus disorder prediction 1119 1137 - -
Bach2g01318 1165 MobiDBLite consensus disorder prediction 861 1165 - -
Bach2g01318 1165 FunFam ATP-dependent RNA helicase RhlB 687 859 - -
Bach2g01318 1165 Pfam Helicase conserved C-terminal domain 709 817 IPR001650 -
Bach2g01318 1165 MobiDBLite consensus disorder prediction 1068 1113 - -
Bach2g01318 1165 Pfam WW domain 22 52 IPR001202 GO:0005515
Bach2g01318 1165 Gene3D - 687 858 IPR027417 -
Bach2g01318 1165 MobiDBLite consensus disorder prediction 77 170 - -
Bach2g01318 1165 ProSitePatterns DEAD-box subfamily ATP-dependent helicases signature. 629 637 IPR000629 -
Bach2g01318 1165 MobiDBLite consensus disorder prediction 965 1027 - -
Bach2g01318 1165 FunFam probable ATP-dependent RNA helicase DDX17 444 686 - -
Bach2g01318 1165 SMART helicmild6 733 817 IPR001650 -
Bach2g01318 1165 SMART ultradead3 497 700 IPR014001 -
Bach2g01318 1165 CDD SF2_C_DEAD 697 826 - -
Bach2g01318 1165 MobiDBLite consensus disorder prediction 1 27 - -
Bach2g01318 1165 MobiDBLite consensus disorder prediction 300 319 - -
Bach2g01318 1165 Pfam DEAD/DEAH box helicase 502 672 IPR011545 GO:0003676|GO:0005524
Bach2g01318 1165 MobiDBLite consensus disorder prediction 1030 1067 - -
Bach2g01318 1165 MobiDBLite consensus disorder prediction 52 170 - -
Bach2g01318 1165 SMART ww_5 21 54 IPR001202 GO:0005515
Bach2g01318 1165 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 712 856 IPR001650 -
Bach2g01318 1165 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 478 506 IPR014014 GO:0003724
Bach2g01318 1165 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 509 683 IPR014001 -
Bach2g01318 1165 ProSiteProfiles WW/rsp5/WWP domain profile. 20 54 IPR001202 GO:0005515
Bach2g01318 1165 MobiDBLite consensus disorder prediction 56 72 - -
Bach2g01318 1165 ProSitePatterns WW/rsp5/WWP domain signature. 26 52 IPR001202 GO:0005515
Bach2g01318 1165 SUPERFAMILY WW domain 17 53 IPR036020 GO:0005515
Bach2g01318 1165 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 456 856 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach2g01318 Bach-Chr2 22641467 22647081 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach2g01318 466 864 Eukaryotic Initiation Factors Gene Family AT3G19760 33.750 2.42e-65 225
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach2g01318 K12823 - gmx:100807830 1248.03