Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach2g01216 ATGATCCAAAAATTAAACGAGTCGGATCGCCGGGTCTTGACTTTTCCGGCAGTTCATCCCTGTGAAAATATCTCTCTCGTCACCCTCCTCACTTCTCTGATTACCCTTTCTAAGAAAATCTCCAATCACAAATCCCAACTCTTCCCCAGCAATAAGCGAAATGCGAGAAAAGCCATAACACTGATCGAGGGTCTTCAAGTTTTTCTCGAAGAGATCCGAGACCAGAAATGGAGTCTACCCAATTCGGCAGTCCTGAGCTTTTCGAAGCTCCACTTCACTTTCCAGAAGCTCCAGTTCTTGTTGGAAGACTGTACCGGCGAAGGTGCTCAGCTGTGGATGTTGATGGAGTCAGATCGGGTCGCAACCCTATTCCGGGTCTTGTCCAGATCGATAGCCACAGCACTGGATGTTTTCCCTTTGAGCTCTGTTCGAATTTCAGAGGAAGCTAAGGAGCAAGTGGAGTTGCTAATGAGACAAGCAAGAAAAGCCATTTTTGAAGTTGAACCCGATTATGAGCAGGCCATGATGGGTGTGTTTTCGATTTTGAATCAATTCGAGAATAGGATTACTCCAAGTGAGAGTGATCTAAAATTGGTTCTTGCTCATATTGGGATTAGAAGATGGAGTGAGTGTAATAAAGTGCTTAAGTTTCTAGATTCAGAAATTGGGTTTGAGTCCTTGAATGCAGAAAAGAGAAAGGTGTCATTTTTAAGTAGTTTAATGGGGTTCATGAGCTACTGTAGATGCGTGGTGTACAACGGTGTTGATGATGAAGAGGACGATCCAAAATCTAATTACAGAGAAAGCAACAGCAGCACTGACAGTGAGATCCTGGGTTGTCTGAACCCAGATGACTTTCGATGTCCAATCTCTCTAGAGTTCATGACTGATCCAGTTACAATAGAGACAGGTCATAGTTATGATCGCTCTTCAATTCTCAAATGGTTTAGAAGTGGGAATCCAACTTGTCCCAAGACAGGTAAAAGGCTTAGCAGCATTGAATTGGTCCCCAATTTGGTTCTACGCAGATTGATTCAGCAATATTGCTCTGAAAATGGGATTCTAATTGCTGATCCAGCTCGCCGGAACCGTGACATCTCAAGGACAGCTCAACCTGAAAGCTTGGCAGCAGAGGAAGCCATGAAAATGGTGGCAAATTTCCTCACTTGCAGGCTTGAAACTGGAACAGAGGAAGAGAGGAACATATCTGCTTATGAGATTAGACTTCTTACCAAAACAAGCATTTTTAATAGGTCTTGTTTGGTGGAGGCAAATGCAATTCCTCACTTATTGCAGCTATTGTTAACCAAGCATTCATCAACACAAGAGAATGCCGCTGCAGCACTTCTGAACCTATCAAAACTCCCTAAGAGCAGAACTATAATAGTTGAGAATTGGGGATTGAAATTGGTTGTGGGTATCCTAAACAAGGGTCTAAAAATGGAAGCTCGCCAGCATGCTGCTGCTATATTGTTCTACCTAGCTTCAAACGAGGAATACCGGAGACTAATAGGAGAAGAACCAGAAGCAATTCCATCATTGATCAAACTCATCAAAGATGGGTCTGACAGAGCCAAAAAGAATTGCTTGGTTGCAATCTTTGGCCTCACTATGCACCCTGAAAATCACAGGAGGTTACTTGCTGCAGAAGCAATCCCTATGCTGGTAAGCATGTTAAAATCCTGTGACAGACAAGACCTTATTACGGATTCACTTGCAATTCTAGCTACTCTAGCTGAAAGAATTGATGGAACAATTGAAGTGCTTCGCTGTGGAGCTTTACATCTAGTTGTTGAAATCATTAGTTCCTCAACTTCAAGAATGGGGAAGGAGTACAGCGTTTCCTTGTTGCTTTCTCTATCAATCTATGGAGGAGCAGATGTGGTTGCTGTCTTAGTGAAGAGTTCTTCTCTCATGGGATCCTTATATTCGATACTTGGTGAAGGCACAGCTCGAGCAAGCAAGAAAGCCAGTGCTCTCATCAGGATCCTCCAAGATTTTTTTGAAAGGAGGTCCTCCGGCTACAGCCCTTCAGTTCTTCCTCAAGAACAATTTGTTCACGTATGGTAA 2070 0.4319 MIQKLNESDRRVLTFPAVHPCENISLVTLLTSLITLSKKISNHKSQLFPSNKRNARKAITLIEGLQVFLEEIRDQKWSLPNSAVLSFSKLHFTFQKLQFLLEDCTGEGAQLWMLMESDRVATLFRVLSRSIATALDVFPLSSVRISEEAKEQVELLMRQARKAIFEVEPDYEQAMMGVFSILNQFENRITPSESDLKLVLAHIGIRRWSECNKVLKFLDSEIGFESLNAEKRKVSFLSSLMGFMSYCRCVVYNGVDDEEDDPKSNYRESNSSTDSEILGCLNPDDFRCPISLEFMTDPVTIETGHSYDRSSILKWFRSGNPTCPKTGKRLSSIELVPNLVLRRLIQQYCSENGILIADPARRNRDISRTAQPESLAAEEAMKMVANFLTCRLETGTEEERNISAYEIRLLTKTSIFNRSCLVEANAIPHLLQLLLTKHSSTQENAAAALLNLSKLPKSRTIIVENWGLKLVVGILNKGLKMEARQHAAAILFYLASNEEYRRLIGEEPEAIPSLIKLIKDGSDRAKKNCLVAIFGLTMHPENHRRLLAAEAIPMLVSMLKSCDRQDLITDSLAILATLAERIDGTIEVLRCGALHLVVEIISSSTSRMGKEYSVSLLLSLSIYGGADVVAVLVKSSSLMGSLYSILGEGTARASKKASALIRILQDFFERRSSGYSPSVLPQEQFVHVW 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach2g01216 689 PANTHER U BOX DOMAIN-CONTAINING 56 664 - -
Bach2g01216 689 SUPERFAMILY ARM repeat 384 664 IPR016024 -
Bach2g01216 689 Gene3D - 509 664 IPR011989 -
Bach2g01216 689 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 425 467 IPR000225 GO:0005515
Bach2g01216 689 Pfam Armadillo/beta-catenin-like repeat 417 453 IPR000225 GO:0005515
Bach2g01216 689 CDD RING-Ubox_PUB 283 335 IPR045210 -
Bach2g01216 689 Gene3D - 378 508 IPR011989 -
Bach2g01216 689 ProSiteProfiles U-box domain profile. 281 355 IPR003613 GO:0004842|GO:0016567
Bach2g01216 689 SMART Ubox_2 285 348 IPR003613 GO:0004842|GO:0016567
Bach2g01216 689 FunFam RING-type E3 ubiquitin transferase 282 354 - -
Bach2g01216 689 SUPERFAMILY RING/U-box 274 358 - -
Bach2g01216 689 SMART arm_5 413 454 IPR000225 GO:0005515
Bach2g01216 689 SMART arm_5 497 538 IPR000225 GO:0005515
Bach2g01216 689 SMART arm_5 455 496 IPR000225 GO:0005515
Bach2g01216 689 SMART arm_5 539 580 IPR000225 GO:0005515
Bach2g01216 689 FunFam RING-type E3 ubiquitin transferase 362 675 - -
Bach2g01216 689 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 282 356 IPR013083 -
Bach2g01216 689 Pfam U-box domain 283 352 IPR003613 GO:0004842|GO:0016567
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach2g01216 Bach-Chr2 21510463 21512532 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach2g01216 1 689 U-box Gene Family AT1G10560 47.084 0.0 591
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach2g01216 - - gmx:100795816 837.795