Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach2g01168 ATGTTGTTTTGCTCCAATTTTGAATCACTGCAGGCACCTATGCCTCCAAGTTTTAGCACACTGGATTATTCCCTTGATCATCACCACCACCACCAGCATCATCAGTATTCACAGACTCAGCAACACCAGCAGCAGCTCATGAAGTTTCGACTGGGAGAAACTTCCGGTGAAAGCAGTAATGGGATGGTGGATTACATGCTGCAAAACCCTCCTCAACAGCAACAAATAGCTTCTGGGTTTTATGGTACGGGTACCGCTTGTTTTGATAAACTGAGTTTTGCAGATGTGATGCATTTTGCTGATTTTGGACCCAAGTTGGGCTTAAACCAAACCAAGGTAACTGAAGAAGAACCCGGCTTAGACCCGGTCTATTTCCTCAAGTTTCCGGTGTTAAACGATAGGATGGAGGATCAGAATATGATGGTTAGCTCACAAGCTGGTGGTGGAGAAGCAGAAAATGATGAGAGGCTCAAAGGGATGAGCATGGAAGATAAATCACCAGCTGGAGGAGTAAGAGATCAGGATGAAGATGCTTGGGTTTCGGATAATAATAACTCGGTGGAGCTTCGTTTTCTGGGAGAGGAACTCCAAAATAATAAGAACCCTATACAGGAAAACAAGAACAAAAGGAAAAGACCTAGAATAATCAAGACAAGCGAGGAAGTAGAGAGTCAGCGTATGACTCACATCGCAGTTGAAAGGAACAGAAGGAAGCAAATGAATGAGCATCTTCGCGTCTTGAGGTCCCTCATGCCAGGTTCATACGTTCAGAGGGGAGATCAAGCTTCAATAATTGGGGGAGCCATAGAGTTTGTTAGGGAATTGGAGCAACTTCTTCAGTGCTTGGAATCGCAGAAGAGGAGGAGACTACTTGGAGAAGCAGGTCATTCAAGACCACAAGTGGGGGATTCCTCACTTCAAATACAGCAGCCTCTTCAGCCTCCATTCTTTCCACCTATGCCTTTGCCAAGTGACCAGATGATTGAGACTGGACTTCGCGAAGAGACAGCGGAGAATAAGTCATGTTTGGCTGATGTAGAAGTGAAGCTTCTAGGATTTGATGCCATGATCAAAATTCTATCAAGAAGAAGGCCAGGGCAGTTAATCAAGACCATTGCTGCCCTTGAGGATCTGCAGCTCATTATCCTTCACACCAACATCACCACCATTGAACAAACAGTCCTTTATTCATTCAACGTCAAGGTAGCAAGCGATTCAAGGTTCACAGCAGAAGATATAGCAAGCTCTGTTCAACAGATATTTAGTTTTATCCATGCAAACACTGGCATGTGA 1293 0.4455 MLFCSNFESLQAPMPPSFSTLDYSLDHHHHHQHHQYSQTQQHQQQLMKFRLGETSGESSNGMVDYMLQNPPQQQQIASGFYGTGTACFDKLSFADVMHFADFGPKLGLNQTKVTEEEPGLDPVYFLKFPVLNDRMEDQNMMVSSQAGGGEAENDERLKGMSMEDKSPAGGVRDQDEDAWVSDNNNSVELRFLGEELQNNKNPIQENKNKRKRPRIIKTSEEVESQRMTHIAVERNRRKQMNEHLRVLRSLMPGSYVQRGDQASIIGGAIEFVRELEQLLQCLESQKRRRLLGEAGHSRPQVGDSSLQIQQPLQPPFFPPMPLPSDQMIETGLREETAENKSCLADVEVKLLGFDAMIKILSRRRPGQLIKTIAALEDLQLIILHTNITTIEQTVLYSFNVKVASDSRFTAEDIASSVQQIFSFIHANTGM 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach2g01168 430 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 224 290 IPR036638 GO:0046983
Bach2g01168 430 Pfam Helix-loop-helix DNA-binding domain 225 276 IPR011598 GO:0046983
Bach2g01168 430 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 224 275 IPR011598 GO:0046983
Bach2g01168 430 CDD bHLH_AtFAMA_like 227 299 - -
Bach2g01168 430 PANTHER TRANSCRIPTION FACTOR FAMA 62 421 IPR044283 GO:0003700|GO:0010052
Bach2g01168 430 Gene3D - 216 290 IPR036638 GO:0046983
Bach2g01168 430 FunFam Basic helix-loop-helix transcription factor 215 290 - -
Bach2g01168 430 SMART finulus 230 281 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach2g01168 Bach-Chr2 21082206 21083951 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach2g01168 51 430 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G24140 62.963 8.33e-151 432
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bach2g01168 HLH 9.3e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach2g01168 K26213 - qsu:112039857 523.087