Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach2g01160 ATGGTTGAAGCTTCTCCGCCGAAGGGAAACTCAGATCCTATTACATATGGAGGCAAGAGCTATGCCCTCAGCGGCAGGATTATGCTAAGCGCGATTACCATTTTGTTCTTCGTCGTCGTTATAATGGTCTGCCTTCACCTCTATGCGCGATGGTACCTTTGGCGCGCTCGCCGCCGCCAAATCCGCCGTAACCGCCGCCACCGTCGTTCTCAGCTTGTATTCTACGTCGACCCCGCCGACTCGGGAGTCGCCACCGTCGCCTCCCGTGGTCTAGAGGAATCTGTTATTAAGTCTCTCCATGTTTTTACATACTCCTCCAAGACCCACCCGGAACCCGTGGAATGTGCCGTTTGCTTGTCGGAATTTGAAGATAGCGAAAGGGGTCGGGTTTTGCCCAAATGCAAACATAGCTTTCATATTGAATGCATCGATATGTGGTTTCAGTCTCACTCCACATGCCCGCTTTGCAGAGCTCCCGTTGAAGCACCTGCGACTATGGACAATAGCCTTTCCGAAGTGGCTATCACTGTCTGCGAACCGGGTTCAAGTTCTGGGTTTTGTGCGGAGTGTGAAAACGAAGGCGAGAGAAGAATCCGAACCGGTCCGAAACTTTCTTCGTCTTCTTCTGTCGCGCTCAGGCGGAAGCCGTCGTCGGCGGGTATAACCATTGAGGTGCCCGGCACCGGAAGGAACGAGAGCTTTGACGAGTCTAATTGCGACTCGCCGTCGACTCAGTCGTCGTTTCGGTCACCGATGAGTCGTATGCTGTCGTTTAAGAGAATGCTTAGCAGAGATCGAAAAGCAGGCCTCTCTCCTACTTCAGCTGCTAACACTGTTGTGGGTTCTAGCTCCATGATCACCACCGACTTAGAAATGGAGAGAGGTGGCAGAGACGAGGCTCGGTGA 906 0.5298 MVEASPPKGNSDPITYGGKSYALSGRIMLSAITILFFVVVIMVCLHLYARWYLWRARRRQIRRNRRHRRSQLVFYVDPADSGVATVASRGLEESVIKSLHVFTYSSKTHPEPVECAVCLSEFEDSERGRVLPKCKHSFHIECIDMWFQSHSTCPLCRAPVEAPATMDNSLSEVAITVCEPGSSSGFCAECENEGERRIRTGPKLSSSSSVALRRKPSSAGITIEVPGTGRNESFDESNCDSPSTQSSFRSPMSRMLSFKRMLSRDRKAGLSPTSAANTVVGSSSMITTDLEMERGGRDEAR 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach2g01160 301 CDD RING-H2_EL5-like 114 157 - -
Bach2g01160 301 ProSiteProfiles Zinc finger RING-type profile. 115 157 IPR001841 -
Bach2g01160 301 MobiDBLite consensus disorder prediction 231 253 - -
Bach2g01160 301 MobiDBLite consensus disorder prediction 270 289 - -
Bach2g01160 301 FunFam RING-H2 finger protein ATL3 82 162 - -
Bach2g01160 301 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE 27 213 - -
Bach2g01160 301 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 80 163 IPR013083 -
Bach2g01160 301 SUPERFAMILY RING/U-box 95 163 - -
Bach2g01160 301 SMART ring_2 115 156 IPR001841 -
Bach2g01160 301 MobiDBLite consensus disorder prediction 221 301 - -
Bach2g01160 301 Pfam Ring finger domain 114 157 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach2g01160 Bach-Chr2 20921820 20922725 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach2g01160 9 298 Rapid Response to Elicitors AT3G16720 50.479 1.08e-83 252
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach2g01160 - - pcin:129320593 300.056