LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bach2g01140	ATGGAACCTCAATTCCCTAAACCTCGATCTTACGGACCCCAAATGAAAATGACGATACCGCCATCTCAACTCTCCGACAACGACCGAAGCAGCACCGAGTTGCGCGCTCTTGATTGCAACCTCACTTCTCTTTGCGATCATATCCAAATGGAAGGTTTCAATTCCGGCTCGTTCTCCGATATCGTGGTCCATGCAATGGGTTCTGCTTATCATCTCCATCGCCTTATTCTATCGCGGAGCTCTTACTTCAGGAACATGCTTCATGGCCCTTGGAAGGAAGCTGGTGCTCCTATTGTCACCTTACATGTTGATGATAAGAATGTCAATGATGAGGCAATTGCAATGGCTTTGGCTTATCTATATGGGCACCATCCTAAGCTCAATGACAATAATGCATTTCGTGTTCTAGCTGCTGCTTCCTTTCTTGATCTCCAGGACTTATGTGCAATATGTACGGACTTTATTATATCTGAGCTGTGGACTTCAAACTTCTTGACATATCAGATATTTGCCGAAAACCAAGACTATGGTATTCATGGGGAGCGTGTTAGAAATGCCTGTTGGGGCTACCTATGTCAAAGTGGTGGCATGGAATTGAAAGAGGTGCTTCCCAAACTTTCCTCTCAAACGTTGCATGCATTACTGACCTCAGATGAGCTGTGGATACCAAGTGAAGAAAAACGGTTTGAACTAGCATTGCACACATTCCTGGAAAAAGGTGCTCGCTGCAAGGCAGAACATCCTGAGCAAGGAAGTTCTGGTTCAGATTCTGGAACCAATATCAATTCTGATTCTGCCAAGGCAAAGGGAAAAAGTGTAACTGATAGCTGCATGAGTAAGGGGTTGGAAACTGATCTAGGGCACTTGAGTCTTAGAAGTGATCTAAAGGAATCTAATACTCATAATCTTCCGGTTGAGCTAGCTGACTGTGTGGCAGATTTCAACAATGGGGATTCTGATTCTAATAGGGAGGCACTTCAAGTTTCATATATTACTTCATCAAACTTGGAGCCAAGATACCCTTGCAACATGGAAGGGCCTTCACCATTGGGTAATTCGCTGTCTGATACAGATGGGATTAGAGCGTCATGTTCTTATATTGAGATGCCTCGCAATGCTGGAACTACTGGACTTGGAACATCTGAAGTAGCGATTGAAGGGCCATCAGGGGAAGGGTCTTGTTACCGTTTAGATAACAATAATTGGCTAATGAGGGATCAATCCAATTGCTTTTCATCAAATTCTTCCTGTAATGAGCTCAGATCAAGTGACTGGGGAAGATATGGCACACCTCCTTTTTCATGGGGCGGCAGGGTTGTTGGCAAAAGACATCTCAAAGCTCACTCAAAAGCAAACCACGGGGCTCATGGGAATGAATGTGATGCCTTTGTTAATATATTTGAAGGGGGTTCTCTTTTGTATTGCAATATGTCTTTTGAGGCACTTTTAAATGTCAGAAAGCAACTGGAAGAATTAGGATTCCCTTGCAAAGCTGTAAATGACGGTCTTTGGCTTCAGATGCTTCTAAGCCAAAGGGTGCAAGAAATTGCTGCTGATACATGCAAAAGTTGTTGCCTTATGAGTATGGCATGCACTTGTCGCCAGCCATTCACATTTTCTCATGGGGTTACTACCTCTGGTTATTACATTCAAGAACATAACCAGAATAATATGCCTGGGAATGTGGGAAATATATATGTTGCTGATTCTTCTCAAAGTGAAGGAAATAGTGCTTTTAGACCGGTACGAGTACATGTTAGGGGTACCATTGATGGGCTTGCAGGTATTGGTCGTGGAAGTACATTTGTGCCAGAAGCTGCTTCACCTCCTACACGTTTTGTCTTTTCTCGTGTACCATTTGGTGTTGGCAACAGAAATTATGCACAATCTGCAGCTAATGATGACTCAGAGTTACGAGCTGACCACAATGGAGACCTGTCTGGAGATGGGTTAACAGCTTTGGTTGGATTGAGCCAGGGGGGAAGTAATGTAATGAATGTGCATGGAGAATTAACACAAAGGGGATACGAAATGGATATGCAAAGTAGAACATCTGGAACTACTGCTGGAGGCCAAAGTACTGGTGGTATTCCCATGCAGATGTTAGAGACACCAGATCATACTATTGGATTAGAATGGGAGAATCCTAACAGTTCATCAATATCATTGGATTTGAAAACACCTTTAAGCGATTTTCCTCCTTTTCGCTTTGGAGTGCAATTTGAGGATGTGCACAGACTTGGTGATGGGCAGGTCAAGCATTCTCCAGAAGTATTCTATGCTGGTTCTTTATGGAAGGTCAGTGTACAGGCTTTCAATGATGAAGACCCCCAGGGACGCCGAACTCTTGGATTGTTTCTTCATCGACGGAAGGCAGAGATAAATGATTCACATAGAAAGGTGCATATGTATGTTGACACACGTGAAAAAGTGACTGCTCGCTATCAGTTGATCTGTCCATCAAAGAGGGAAGTGATGGTGTTTGGAAGCTTTAAACAAACAGGGACTCTTCTACCTAAAGCTCCTAAAGGATGGGGTTGGCGAACTGCTCTGTTATTTGATGAGCTTGCAGATCTTCTCCAAAATGGGGCCTTGCGGGTCATTGCTGTTGTACAGCTTGTTTGAATTAAACAAGGTAAAAACGCGAGTCCATATTTATGTAGTATACAAAAACTTGCGGGTCATTGTTTAAGTTTCCAATAAGTTACAAGCTCAGATGTATCAGTATGCAACTCAGCTTTTGATAGTAGACCAAAATTGTACAAGATTTTGATGTTTTCAAATGTGCTTTGTAGAATATAGGCTAGAA	2809	0.4286	MEPQFPKPRSYGPQMKMTIPPSQLSDNDRSSTELRALDCNLTSLCDHIQMEGFNSGSFSDIVVHAMGSAYHLHRLILSRSSYFRNMLHGPWKEAGAPIVTLHVDDKNVNDEAIAMALAYLYGHHPKLNDNNAFRVLAAASFLDLQDLCAICTDFIISELWTSNFLTYQIFAENQDYGIHGERVRNACWGYLCQSGGMELKEVLPKLSSQTLHALLTSDELWIPSEEKRFELALHTFLEKGARCKAEHPEQGSSGSDSGTNINSDSAKAKGKSVTDSCMSKGLETDLGHLSLRSDLKESNTHNLPVELADCVADFNNGDSDSNREALQVSYITSSNLEPRYPCNMEGPSPLGNSLSDTDGIRASCSYIEMPRNAGTTGLGTSEVAIEGPSGEGSCYRLDNNNWLMRDQSNCFSSNSSCNELRSSDWGRYGTPPFSWGGRVVGKRHLKAHSKANHGAHGNECDAFVNIFEGGSLLYCNMSFEALLNVRKQLEELGFPCKAVNDGLWLQMLLSQRVQEIAADTCKSCCLMSMACTCRQPFTFSHGVTTSGYYIQEHNQNNMPGNVGNIYVADSSQSEGNSAFRPVRVHVRGTIDGLAGIGRGSTFVPEAASPPTRFVFSRVPFGVGNRNYAQSAANDDSELRADHNGDLSGDGLTALVGLSQGGSNVMNVHGELTQRGYEMDMQSRTSGTTAGGQSTGGIPMQMLETPDHTIGLEWENPNSSSISLDLKTPLSDFPPFRFGVQFEDVHRLGDGQVKHSPEVFYAGSLWKVSVQAFNDEDPQGRRTLGLFLHRRKAEINDSHRKVHMYVDTREKVTARYQLICPSKREVMVFGSFKQTGTLLPKAPKGWGWRTALLFDELADLLQNGALRVIAVVQLV	874

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bach2g01140	874	Pfam	BTB/POZ domain	53	157	IPR000210	GO:0005515
	Bach2g01140	874	MobiDBLite	consensus disorder prediction	245	274	-	-
	Bach2g01140	874	SMART	BTB_4	59	159	IPR000210	GO:0005515
	Bach2g01140	874	MobiDBLite	consensus disorder prediction	16	30	-	-
	Bach2g01140	874	Gene3D	Potassium Channel Kv1.1; Chain A	25	192	IPR011333	-
	Bach2g01140	874	PANTHER	BTB/POZ DOMAIN-CONTAINING PROTEIN	14	874	-	-
	Bach2g01140	874	SUPERFAMILY	POZ domain	53	157	IPR011333	-
	Bach2g01140	874	MobiDBLite	consensus disorder prediction	250	272	-	-
	Bach2g01140	874	MobiDBLite	consensus disorder prediction	1	30	-	-
	Bach2g01140	874	ProSiteProfiles	BTB domain profile.	59	129	IPR000210	GO:0005515

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TR	TRAF	Bach2g01140		BTB	6.7e-14	CL0033

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bach2g01140	-		-	qsa:O6P43_003564	1464.13