Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach2g01065 GGGAAAGCCAGCATCGCTATTTGGTACTTCCTTGTCAAACGGTTTAAGAACATTATTGACCCTCTCACTCTCCAAATTTCGAAAGACGCGCGCGAACTCCATTCTGCTAGATTTAGGGTTTGTACAGTTTCCGTGAACTTCCCTCGGCTCCTCTTCTAGGATTTACTTGATTGAGTTGGAGAGAGAAAAGATTTCATAGTATGGCCAGATATCGAAGCCGGAGCAGGACACCGCCGCGAGGACGTAAGCGGTACGATGATGAACCCGGCGAACGCCACCGTGACAGCAGGTCTTACCGAGATCGCGGTTCGCCCGCTCCTTGCGGCTTGCTCGTTCGAAATCTTCCCCTTGATGCCAGGCCTGAAGATCTTAGGGTTCCGTTTGAGCGCTATGGTGCTGTGAAGGATGTTTATCTTCCTAGGAATTACCACACTCGTCAGCCTAGGGGGTTTGGATTTGTGAAGTTCCGATATGCTGAAGATGCAGCCGAAGCAAAGCAACAGCTTAATCATACTGTTATTGGTGGGCGTGAAATAACAATCGTGTTTGCAGAGGAAAATAGGAAAACACCCCAAGAAATGCGTAAGACTGCTCGCCCGAGTGGTCGATATGGAGTAAGTGATAGAGGGAGAACTCCTACAAGATCTCCAAGACGCAGACATCGATCTTACTCAGGATCTCCTTCACCAGCCAGGGATGACTCCAGGGATCGCAGGGATAGGGATGATTATCGTTCTCCTGAGCGATCTGGATCTTATTCTAGGTCTCCCTCTCCTCGTGGTAAGAAGGATCACGGGAGGTCCCCAAGTCCATTGGAGAATGGTCGGAGTCCCAATGACAAGAGGGACCATACACCTTGCCGATCAGGGAGTACTAGGCGCAATGGCCACAGTCCTTCAAAGTCTCGTTTGCCGTCATACAGTCCTCGCTGA 932 0.5032 MARYRSRSRTPPRGRKRYDDEPGERHRDSRSYRDRGSPAPCGLLVRNLPLDARPEDLRVPFERYGAVKDVYLPRNYHTRQPRGFGFVKFRYAEDAAEAKQQLNHTVIGGREITIVFAEENRKTPQEMRKTARPSGRYGVSDRGRTPTRSPRRRHRSYSGSPSPARDDSRDRRDRDDYRSPERSGSYSRSPSPRGKKDHGRSPSPLENGRSPNDKRDHTPCRSGSTRRNGHSPSKSRLPSYSPR 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach2g01065 243 SUPERFAMILY RNA-binding domain, RBD 33 129 IPR035979 GO:0003676
Bach2g01065 243 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 41 119 IPR000504 GO:0003723
Bach2g01065 243 SMART rrm2_1 42 115 IPR003954 GO:0003676
Bach2g01065 243 MobiDBLite consensus disorder prediction 13 34 - -
Bach2g01065 243 MobiDBLite consensus disorder prediction 191 223 - -
Bach2g01065 243 MobiDBLite consensus disorder prediction 118 243 - -
Bach2g01065 243 Gene3D - 2 132 IPR012677 -
Bach2g01065 243 MobiDBLite consensus disorder prediction 164 182 - -
Bach2g01065 243 MobiDBLite consensus disorder prediction 224 243 - -
Bach2g01065 243 SMART rrm1_1 42 115 IPR000504 GO:0003723
Bach2g01065 243 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 43 113 IPR000504 GO:0003723
Bach2g01065 243 PANTHER TRANSFORMER-2 SEX-DETERMINING PROTEIN-RELATED 42 228 - -
Bach2g01065 243 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach2g01065 Bach-Chr2 20262921 20268047 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach2g01065 45 103 Eukaryotic Initiation Factors Gene Family AT3G11400 45.763 3.90e-07 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach2g01065 K12900 - cave:132183604 303.138