Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach2g01013 ATGGGAATTTCGTGGAGTAGTAGAAGGAGAAACAATTACCTTCAAAACCCACCACCACCACCACCTCCTCATCTTCCACCCCCTTACTATTACTCCTCAGATTCTCATTCTCACCATCCTCCCCCTCCACCTCCTCCGCCACCACCGCCGCCGCCTCAAGGTTACTTTTTTACCTCAACAGTTCCTTATAGTCATCACAGCAATAGCTATGCTGCTCCCCCTCCTCTGCCACCGCCACCTCCACCTCCACCTCCACCTTCTCAAACACATTCCTTCTATTACTCAAATGGGTATAGCAATTGCCCCAACTTTGCCAATCCTATGGCGGGTAGGTTTCATTACCACCCTTATTATGTAAATCAGCCAAATGGGTGGCCTGCAATTCGTCCACCTGTTGCTCCGGCTCAAACCCCACCACCCTACGTTGATCATCAAACCGCGAAGAAGATTAAGAACGATGTCAATGTGCATAAAGCTACGTTGCGGCTTGAGGTCGATGAGCACAATCCTGATCATCACTTGGTGTCATTTGTTTTTGATGCCATATATGATGGGAGCATTACCATCTTCTACTTTGCCAAGGAAGAAGAAAAATGTAGGTTTGTTCCATTGTATCCTGATGAATTTGAGCCAGTCACAATCCCCTTTGAGAAAGGAGTTGGTCAAAGGTTTATTCAGCCTTCAGGAACAGGCATCGACTTGGGATTTTTTGAGTTGGATGATCTCTCAAAACCCTCACCTGGAGAAGAGGTCTTCCCCCTTGTAATATGTGCTGAAACAAGAAATCCTTCATCAGATGAAAACCTTGGTGATTCCGTGCTAGATGTATCTCCTCACATGCAGATTACTCAAGCTATTCTAGAGAGAAGTAATGGTGATGGTCCTTTCCAGGTGAAAGTAATTAGGCAGATTCTGTGGATTGATGGAATTCGTTATGAGTTAAGAGAGCTCTATGGAATAGGAAGCTCATCAGAAGCAGATTTTGAGGACAATGAGCCCGGGAAGGAGTGTGTAATATGCATGACTGAGCCTAAGGATACTGCTGTTTTACCTTGTCGACATATGTGTATGTGCAGTGAGTGTGCACAAGCTCTGAGGCATCAATCAAATAAATGCCCTATATGCCGTCAGCCGATTGAGGAACTTATAGAGATCAAGATAAATAACAGCAATCAATGA 1179 0.4504 MGISWSSRRRNNYLQNPPPPPPPHLPPPYYYSSDSHSHHPPPPPPPPPPPPPQGYFFTSTVPYSHHSNSYAAPPPLPPPPPPPPPPSQTHSFYYSNGYSNCPNFANPMAGRFHYHPYYVNQPNGWPAIRPPVAPAQTPPPYVDHQTAKKIKNDVNVHKATLRLEVDEHNPDHHLVSFVFDAIYDGSITIFYFAKEEEKCRFVPLYPDEFEPVTIPFEKGVGQRFIQPSGTGIDLGFFELDDLSKPSPGEEVFPLVICAETRNPSSDENLGDSVLDVSPHMQITQAILERSNGDGPFQVKVIRQILWIDGIRYELRELYGIGSSSEADFEDNEPGKECVICMTEPKDTAVLPCRHMCMCSECAQALRHQSNKCPICRQPIEELIEIKINNSNQ 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach2g01013 392 ProSiteProfiles Zinc finger RING-type profile. 337 376 IPR001841 -
Bach2g01013 392 SUPERFAMILY RING/U-box 331 382 - -
Bach2g01013 392 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 321 386 IPR013083 -
Bach2g01013 392 PANTHER MAHOGUNIN 1 387 IPR045194 GO:0061630
Bach2g01013 392 Pfam Zinc finger, C3HC4 type (RING finger) 335 381 - -
Bach2g01013 392 MobiDBLite consensus disorder prediction 37 56 - -
Bach2g01013 392 SMART ring_2 337 375 IPR001841 -
Bach2g01013 392 MobiDBLite consensus disorder prediction 1 91 - -
Bach2g01013 392 CDD mRING-HC-C3HC5_MGRN1-like 335 376 IPR045195 -
Bach2g01013 392 FunFam probable E3 ubiquitin-protein ligase LOG2 321 386 - -
Bach2g01013 392 MobiDBLite consensus disorder prediction 71 89 - -
Bach2g01013 392 MobiDBLite consensus disorder prediction 14 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach2g01013 Bach-Chr2 19783713 19786527 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach2g01013 83 392 C3H Transcription Factor Family AT3G06140 52.615 9.43e-106 314
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach2g01013 - - qsa:O6P43_021626 546.199