LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bach2g01009	ATGAAAGGGATGCTTGAAAAGCAACCATCTCCAGATAATTCAAATTATGCTTCAAGCAGTGGTCTTTCTGCAGATGATAAGGAGACTGGAAGCAGTGCCGCAATATCTAACCATCACTATGTTCTGGTTAACAACTCTTCTTCACTCTACTTGCCTTTCAAAATTAACCTCAATTCGGCTCGCATGGTTATGGCAGAGGTGGTGGGCACTTTTATTTTGATGTTCTGTGGATGTGGAATCATGGCAACCACGCAATTCCAAAATGGCCAAGTAGGTCTTCTGGAGTATGCAGCTACAGCAGGATTAACAGTGGTTGTGATAGTTTTCTCTATAGGGAAAATCTCTTGTGCGCATGTAAACCCAGCTGTCACAATAGCTTTTGCAACATCTGGTCACTTTCCATGGTCCAAGGTTCCAATATACATAACCGCACAAACAGTGGGTTCTGTGTTGGCAACATATATTGGTAGCCAAGTTTATGGCATAAGATCAGATGTTATGATGACCAGGCCACTCCAAGGGTGCGTTTCTGCATTCTGGGTGGAGCTTATTGCAACTTTCATCATTATGTTCCTGGCTGCAGCTTTGATATGTGAATCTGAATCAGTAGTTCATTTATCTGGTTTTGTGGTTGGAATAGCTATTGGACTTGCTGTGCTAATCACAGGTCCTGTTTCAGGTGGATCAATGAACCCTGCAAGATCATTAGGTCCCGCAATTCTTTCATGGAAATTTAAGGACATCTGGATATATATCACTGGCCCCATTGCAGGAGCTGTGGCTGGTGCTCTGACGTTTCGCTTTCTACGCCTTCAGCACCAACCCTGCAATCATCCTTCTTCCCTGAACCCTGGATCTATTGGCCATTCAATTTCCTTCAGTGGAAGTTAG	891	0.4366	MKGMLEKQPSPDNSNYASSSGLSADDKETGSSAAISNHHYVLVNNSSSLYLPFKINLNSARMVMAEVVGTFILMFCGCGIMATTQFQNGQVGLLEYAATAGLTVVVIVFSIGKISCAHVNPAVTIAFATSGHFPWSKVPIYITAQTVGSVLATYIGSQVYGIRSDVMMTRPLQGCVSAFWVELIATFIIMFLAAALICESESVVHLSGFVVGIAIGLAVLITGPVSGGSMNPARSLGPAILSWKFKDIWIYITGPIAGAVAGALTFRFLRLQHQPCNHPSSLNPGSIGHSISFSGS	296

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bach2g01009	296	PRINTS	Major intrinsic protein family signature	212	234	IPR000425	GO:0015267\|GO:0016020\|GO:0055085
	Bach2g01009	296	PRINTS	Major intrinsic protein family signature	61	80	IPR000425	GO:0015267\|GO:0016020\|GO:0055085
	Bach2g01009	296	PRINTS	Major intrinsic protein family signature	181	199	IPR000425	GO:0015267\|GO:0016020\|GO:0055085
	Bach2g01009	296	PRINTS	Major intrinsic protein family signature	249	269	IPR000425	GO:0015267\|GO:0016020\|GO:0055085
	Bach2g01009	296	PRINTS	Major intrinsic protein family signature	137	156	IPR000425	GO:0015267\|GO:0016020\|GO:0055085
	Bach2g01009	296	PRINTS	Major intrinsic protein family signature	100	124	IPR000425	GO:0015267\|GO:0016020\|GO:0055085
	Bach2g01009	296	MobiDBLite	consensus disorder prediction	8	30	-	-
	Bach2g01009	296	ProSitePatterns	MIP family signature.	118	126	IPR022357	-
	Bach2g01009	296	Gene3D	Glycerol uptake facilitator protein.	25	281	IPR023271	-
	Bach2g01009	296	PANTHER	AQUAPORIN NIP2-1	37	274	IPR034294	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Bach2g01009	Bach-Chr2	19726396	19727875	Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bach2g01009	137	276	Major Intrinsic Protein MIP	AT3G06100	57.447	5.71e-55	175

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bach2g01009	K09874		-	qsa:O6P43_021616	414.461

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