Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach2g00999 ATGGATGCTTTTTCAGCTGCACAGCTTCTCTCACTTTCCCCGGTCCTTTCCTTTGAAAAGCCAACTCCTTCTTGTTTGCCATTTCATTCGCAAAACCGTAGTCTAAGATTCCTTTCCCCCATTAACCGGAATAACTCTGCTATCCACCTTATATCCAAGTTCAGAATTTCACTAGCTGTTGTAGAAAATTCTTTTGTAAACCATGAATCGAATCATGTCGTGGGCAGTCCCACTCTAAGAGAAATATGCAGAGCTCACGATGGAAAAGATTGGATATGTTATGCCTACAGATGTCCAGCGGCTAGCATTACCTATTCTCTTTTCTGGACGAGATTGTATACTTCATGCTCAGGTTCTGGGAAGACACTTGCATACCTTCTTTTGATATATTCCATCATAAAGACTGCAAAATCTGCTGTGCAAGCAATAGTTGTGGTACCCACTCGTGAACTTGGCATGCAAGTCACAAAAGTTGCTAGAATGTTGGCTGCAAATCCGATGGAGGTCCAGGGGGAGCAGAAGTCATGTATCATCATGGCTCTTTTAGATGGAGGAACATTGAGAAGACACAAGAGTTGGCTAAAGGCAGAGCCTCCTCAAATAGTGGTGGCAACAGTGGGGAGTTTATGCGAAATGCTTGAAAGACAAATGTTTAAGCTTGAATCTGTGCGGGTGCTGGTAGTAGACGAGGTTGACTTCATTTTCTATTCTTCAAAGCAAGTCAGTTCTCTTCGAAAGCTTTTGATGTCATATTCATCATGCAGTAACCATCAGACAGTTTTTGCTAGTGCATCTATACCACAACATAGACGATTCGTTCATGACTGTGTGCAGCAAAAATGGACTAAGAGAGATGTGGTGCACATTCATGTCAGTCCTGTCGAGCCCATGCCATCTCGTCTACATCATAGATATATAGCGTGTCACAAAAATCGGAAACAAGAAACATTGTTATCCTTGATACATTCTGACGCACCTGAGTCCGCCATTATATTTGTGGCTGAGCAGTCTGAGAAGTCAAAAAAGGCGGGAAATGCTCCATCCACATCTCTTCTAGTTGACTTTCTAAGGACTTCATATCAAGGTTCTTTGGATATCCTTCTTCTTGAGAAAGACATGAATTTCAATTCCAGAGCCACTTCATTGTTGGAGGTCAGGAAAGGAGGAGGATATCTTCTCGTAGCCACAGATATAGCTGCCAGAGGAGTTGATCTACCGGAAATGTCTCACATATACAACTTTGATCTGCCAAAGACTGCAACAGATTATCTTCATCGTGCAGGAAGGACTTGTAGAAAACCCTTTTCTGACATGAAATGCACTGTTACCAGCATTATAGTTCCCGAGGAAAGATTTGTTCTGCAGAAATATGAAAATGAATTGATGTTCAACTGTGAAGAGCTTAGTTCATAA 1413 0.419 MDAFSAAQLLSLSPVLSFEKPTPSCLPFHSQNRSLRFLSPINRNNSAIHLISKFRISLAVVENSFVNHESNHVVGSPTLREICRAHDGKDWICYAYRCPAASITYSLFWTRLYTSCSGSGKTLAYLLLIYSIIKTAKSAVQAIVVVPTRELGMQVTKVARMLAANPMEVQGEQKSCIIMALLDGGTLRRHKSWLKAEPPQIVVATVGSLCEMLERQMFKLESVRVLVVDEVDFIFYSSKQVSSLRKLLMSYSSCSNHQTVFASASIPQHRRFVHDCVQQKWTKRDVVHIHVSPVEPMPSRLHHRYIACHKNRKQETLLSLIHSDAPESAIIFVAEQSEKSKKAGNAPSTSLLVDFLRTSYQGSLDILLLEKDMNFNSRATSLLEVRKGGGYLLVATDIAARGVDLPEMSHIYNFDLPKTATDYLHRAGRTCRKPFSDMKCTVTSIIVPEERFVLQKYENELMFNCEELSS 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach2g00999 470 CDD DEADc 118 290 - -
Bach2g00999 470 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 47, MITOCHONDRIAL 115 461 - -
Bach2g00999 470 SMART helicmild6 350 434 IPR001650 -
Bach2g00999 470 CDD SF2_C_DEAD 301 432 - -
Bach2g00999 470 SMART ultradead3 75 304 IPR014001 -
Bach2g00999 470 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 118 250 IPR014001 -
Bach2g00999 470 Pfam Helicase conserved C-terminal domain 313 432 IPR001650 -
Bach2g00999 470 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 116 436 IPR027417 -
Bach2g00999 470 Gene3D - 109 288 IPR027417 -
Bach2g00999 470 Pfam DEAD/DEAH box helicase 117 268 IPR011545 GO:0003676|GO:0005524
Bach2g00999 470 Gene3D - 297 468 IPR027417 -
Bach2g00999 470 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 313 470 IPR001650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach2g00999 Bach-Chr2 19639764 19645282 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach2g00999 117 470 Eukaryotic Initiation Factors Gene Family AT1G72730 27.424 6.93e-26 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach2g00999 - - ahf:112763379 607.06