Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach2g00991 ATGGTCTTGCCTCAGCTCGACTCCATCGACCATGCCCAGAAGACCAAGACACTGATTTGTGCTCTCAACCTTGTTTCCCGCGACCTCCCTCTCCCTCCCGACCTCTTTCAGACCGTTTCCTCAATCTATCATGGCGCACATGGCGCTGACACTGATGCCCAACAATGTGGGGTTCTTGATGACATTACCGCTGCTGCTGGATCCGATAAGAGAACCGTGGATGTGGATAGCCGGAAGAGTTTGGATGTCATAGAGAATTCTAGAGTAGATTTATTGACAGAGTTTGAAGATGCACTGTTGAAGCAACGCTCAAATTGTGTGTTAGGTTTCAAATTGAAGGAAACATGGGAAAACCGTTATCAAAGTCGGATTCAGCATCGATTAAATGAGCTTGAAGAGTTGCCCTCAAGCAGGGGAGAGGATCTGCAGACAAAGTGCCTGCTTGAACTATATGGACTAAAGCTAACAGAGTTGCAGAGGAAAGTCAGGTCTGAAGTGAGTTCTGAATACTTGCTCAATGTTTTATGTGCCTATCCTGATAGACAATTGTTTGATTGGGGAGTGATGCGGTTGCACCGTCCACTATATGGTGTTGGAGATCCATTCTCCATGGATGCTGATGATCAACTAAGGAAGAAAAGGGATGCTGAGAGACTGTCAAGGTTAGAAGAGGAGGAAAAAAATCATACAGAGACCAGAAAAAGAAAATTTTTTACAGAAATACTGAATGCTGTCCGTGAGTTCCAATTACAACTTCAAGCTTCTTTGAGACGGAGAAAACAGAGAAATGATGGCATCCAGGCTTGGCATGGAAGGCAAAGGCAACGTGCAACACGGGCCGAGAAATTGAGATTCCAAGCCTTAAAGGCTGATGATCAAGAAGCATACATGAGAATGGTAAAGGAGAGCAAGAATGAAAGACTGACTTTGCTTCTGGAGGAAACTAATAAACTACTTGTAAATTTGGGAGCAGCTGTTCAACGTCAAAAAGACTCAAAACATTTGGATGGCATTGAGCCCTTGGATGATTCTGAAGCTGACTTACAAGAGTCAGATGCTTCAAAGAATTCTGAGGAAGATATGGATGTTATTGATTCTGATCATAATGGTGATGATAGTGATTTACTTGAAGGTCAAAGGCAATACAACTCTGCCATCCATTCGATTCAAGAAAAGGTAACTGAGCAACCATCTTGTCTTCAAGGTGGAGAATTAAGACCATACCAGATAGAAGGGCTCCAGTGGATGCTTTCTTTGTTTAATAACAATCTAAATGGAATTTTGGCTGATGAAATGGGGCTAGGGAAGACAATACAGACCATTTCATTGATAGCATATCTTATGGAGCATAAGGGTGTGACTGGTCCGTACTTGATTGTGGCTCCAAAGGCTGTTCTGCCAAATTGGATCAGTGAATTCTCAACATGGGTTCCTAGCATTACAACTGTTCTTTATGATGGACGGCTGGATGAGAGGAAAGCCATGAGGGAAGAATTTTCAGGGGAGGGAAAATTTAATGTTCTGATAACGCACTACGATCTTATCATGAGAGATAAAGCATTTCTCAAGAAATTTCACTGGTACTACTTAATTGTAGATGAAGGGCATCGGTTAAAGAATCACGAGTGTGCTTTAGCAAGAATCCTTGACTCCAGCTATCACATCCAACGCAGACTCCTCTTGACTGGAACTCCAATTCAAAATAGTTTACAGGAATTGTGGTCCCTGCTTAATTTTTTGCTTCCAAACATTTTTAATTCAGTTCAAAATTTCGAGGACTGGTTTAATGCCCCCTTTGCAGATCGAGTTGATGTCTCTCTAACAGATGAAGAACAGCTACTGATCATTCGCCGTTTGCACCAAGTAATAAGGCCCTTCATCTTAAGAAGGAAAAAAGATGAGGTGGAAAAATATCTTCCTGGAAAATCTCAGGTCATACTCAAATCTGACATGTCAGCGTGGCAGAAAGTATATTATCAACAAGTTACTGACTCGGGCAGAGTTGGTTTAGACAATGGTTCTGGGAAATCAAAAAGCCTACAGAATCTAACAATGCAACTGAGAAAGTGTTGTAACCATCCATACCTCTTTGTGGGAGACTATAGTAATATGTGGAATAAGGACGAGATTATCAGAGCATCGGGGAAATTTGAACTTCTTGACCGCTTGCTCCCAAAACTTCAAAGAGCTGGGCACAGAGTCCTTCTTTTCTCGCAAATGACTCGTCTTATGGACATTCTTGAAGTTTATCTGCGGATGCATGATTACTATTTTCTTAGACTTGATGGCTCAACAAAAACTGAGGATAGAGGGTCTCTACTACGAAAATTTAATGCTCCTGATTCTCCGTACTTTATGTTTCTTTTGAGCACCCGTGCTGGAGGTCTTGGTCTGAACTTACAAACAGCAGATACTGTTATAATCTTTGACAGTGATTGGAACCCTCAAATGGATCAGCAAGCTGAGGATCGGGCTCATCGTATTGGTCAAAAAAAGGAAGTTAGGGTTTTTGTGTTGGTTAGTGTGGGATCAATTGAAGAGGTGATTTTGGAGCGTGCAAAACAAAAGATGGGCATTGATGCTAAAGTCATCCAGGCAGGACTGTTCAACACAACTTCAACAGCTCAGGACAGAAGAGAAATGTTGCAGGAGATCATGCGTAGAGGTACAAGCTCTCTTGGGACAGATGTACCAAGTGAAAGAGAAATCAACCGCCTTGCAGCCCGATCTGATGAGGAATTTTGGTTATTTGAGAAAATGGATGAAGAGAGAAGGCAAAAGGAGAACTACCGATCTCGTCTCATGGAAGAACATGAAGTGCCTGAGTGGGTTTACTCTGCACCTGGTAAGGATGATAAACCCAAAGGTTTTGACAGTATTAGCGTTACTGGAAAGCGAAAACGAAAAGATGTGGCATATTCCGATAACATGAGTGAGCTACAATTTATGAAAGCTGTGGAGAATGGGGACATGCCAAGCATCCTAAGTAGAGGGAAAAGAAGAGACCGGACACCATCGGATAGTGGGGGGCCAGAGGAAAGGTTACCAGAGTTAAGGAATGAAAGTGTCCCTGTCTCCATGGCAAATGAGAGAACAAGTTCAGATAGTTTCCATGTCACTCCATCCCCAAAGAGACTCAAGCCTGAAGTAGCAAACACCCAGAGACATGAACCTGAGGGTGTAAGTGGAGTTGGTTTGAATGAGCATGTGTTTTCCTGGAATACCCACAGAAAGAAGAGATCAAGCCATCTTGCCCAGGGTTCATTGTCTGATTCTAGAGGACAGAACTCAAATGGAAGATCAAATTGGAGCTGA 3315 0.4262 MVLPQLDSIDHAQKTKTLICALNLVSRDLPLPPDLFQTVSSIYHGAHGADTDAQQCGVLDDITAAAGSDKRTVDVDSRKSLDVIENSRVDLLTEFEDALLKQRSNCVLGFKLKETWENRYQSRIQHRLNELEELPSSRGEDLQTKCLLELYGLKLTELQRKVRSEVSSEYLLNVLCAYPDRQLFDWGVMRLHRPLYGVGDPFSMDADDQLRKKRDAERLSRLEEEEKNHTETRKRKFFTEILNAVREFQLQLQASLRRRKQRNDGIQAWHGRQRQRATRAEKLRFQALKADDQEAYMRMVKESKNERLTLLLEETNKLLVNLGAAVQRQKDSKHLDGIEPLDDSEADLQESDASKNSEEDMDVIDSDHNGDDSDLLEGQRQYNSAIHSIQEKVTEQPSCLQGGELRPYQIEGLQWMLSLFNNNLNGILADEMGLGKTIQTISLIAYLMEHKGVTGPYLIVAPKAVLPNWISEFSTWVPSITTVLYDGRLDERKAMREEFSGEGKFNVLITHYDLIMRDKAFLKKFHWYYLIVDEGHRLKNHECALARILDSSYHIQRRLLLTGTPIQNSLQELWSLLNFLLPNIFNSVQNFEDWFNAPFADRVDVSLTDEEQLLIIRRLHQVIRPFILRRKKDEVEKYLPGKSQVILKSDMSAWQKVYYQQVTDSGRVGLDNGSGKSKSLQNLTMQLRKCCNHPYLFVGDYSNMWNKDEIIRASGKFELLDRLLPKLQRAGHRVLLFSQMTRLMDILEVYLRMHDYYFLRLDGSTKTEDRGSLLRKFNAPDSPYFMFLLSTRAGGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVILERAKQKMGIDAKVIQAGLFNTTSTAQDRREMLQEIMRRGTSSLGTDVPSEREINRLAARSDEEFWLFEKMDEERRQKENYRSRLMEEHEVPEWVYSAPGKDDKPKGFDSISVTGKRKRKDVAYSDNMSELQFMKAVENGDMPSILSRGKRRDRTPSDSGGPEERLPELRNESVPVSMANERTSSDSFHVTPSPKRLKPEVANTQRHEPEGVSGVGLNEHVFSWNTHRKKRSSHLAQGSLSDSRGQNSNGRSNWS 1104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach2g00991 1104 MobiDBLite consensus disorder prediction 348 375 - -
Bach2g00991 1104 FunFam Chromatin structure-remodeling complex protein SYD 396 639 - -
Bach2g00991 1104 SMART SnAC_2 922 983 IPR029295 GO:0042393
Bach2g00991 1104 MobiDBLite consensus disorder prediction 329 376 - -
Bach2g00991 1104 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 417 583 IPR014001 -
Bach2g00991 1104 MobiDBLite consensus disorder prediction 1085 1104 - -
Bach2g00991 1104 SMART helicmild6 745 829 IPR001650 -
Bach2g00991 1104 Gene3D - 636 936 IPR027417 -
Bach2g00991 1104 Gene3D - 375 629 IPR038718 -
Bach2g00991 1104 Pfam Helicase conserved C-terminal domain 716 829 IPR001650 -
Bach2g00991 1104 MobiDBLite consensus disorder prediction 990 1104 - -
Bach2g00991 1104 MobiDBLite consensus disorder prediction 1025 1040 - -
Bach2g00991 1104 MobiDBLite consensus disorder prediction 945 970 - -
Bach2g00991 1104 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 632 886 IPR027417 -
Bach2g00991 1104 Pfam SNF2-related domain 408 696 IPR000330 GO:0005524|GO:0140658
Bach2g00991 1104 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 381 630 IPR027417 -
Bach2g00991 1104 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 719 886 IPR001650 -
Bach2g00991 1104 MobiDBLite consensus disorder prediction 994 1019 - -
Bach2g00991 1104 Coils Coil 920 940 - -
Bach2g00991 1104 CDD SF2_C_SNF 707 840 - -
Bach2g00991 1104 SMART ultradead3 401 594 IPR014001 -
Bach2g00991 1104 Pfam Snf2-ATP coupling, chromatin remodelling complex 923 983 IPR029295 GO:0042393
Bach2g00991 1104 Coils Coil 212 232 - -
Bach2g00991 1104 FunFam Probable ATP-dependent DNA helicase CHR12 636 935 - -
Bach2g00991 1104 PANTHER SNF2/RAD54 HELICASE FAMILY 152 1017 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach2g00991 Bach-Chr2 19559929 19568871 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach2g00991 691 857 RAD5 or RAD16-like Gene Family AT5G43530 34.503 3.16e-21 98.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Bach2g00991 SNF2_N 6e-67 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach2g00991 - - pcin:129308606 1803.1