Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach2g00888 ATGCCGGTGAGACAGATAAAGGAAAGCTCCGAGCAACACCTAGTGATTAAAACCCATTTGCAAAACGCCATTAACTCAGTGAAGAAGGTACCAAAAACTGTCCAAAATGGTAAAGGGCCCCCGTCACAAGAACCACATAACGCCAAACCGCACTGCCAGACTTCACCTCAGGCAAAGAACAGAGGCAGAAGAAGGGGAAGAGGTGTCCGGAAATCCGATCAAGGTGACATTTTGATGCGGCCCAGTTCCCGGCCGTGCACGGTGGCAAATAAGCCGGTATCAGACAATCAGACTGTCCTAGCAAACAGTGCAAATGGGTCTCTCCGCAATGGCCGCAGCAACTGCGATATAGAGATGGGTCTTCCCAATTTTCCTACTTCGAGCAAGTCTTTGAGCTTCGCTCCAAGGCCTGGGTACGGTCAAGTTGGGACAAAATGCATTGTGAAGGCTAACCATTTCTTTGCAGAGTTACCAGACAAGGACCTGAACCAGTATGATGTTACTATTACCCCTGAAGTGTCTTCGAGGACCGTAAACAGAGCCATCATGGCAGAACTGGTGAGGTTGTATAAAGAGTCTGACTTGGGGATGAGACTTCCAGCCTATGATGGGAGAAAAAGTCTGTACACCGCAGGGGAGCTTCCCTTTACTTGGAGAGAGTTTAAGATTAAGCTTATAGATGAAGAGGATGGAGTCAATGGTCCCAAAAGAGAAAGAGAATACAGAGTGGTGATCAAGTTTGTAGCTCGGGCAAACTTGTATCACTTGGGCCAGTTTTTAGCTGGTAAGCGTGCTGATGCTCCACAGGAGGCACTTCAAATTCTTGACATTGTATTAAGAGAGCTATCAAATAAGAGGTATTGCCCCATTGGGAGGTCCTTCTTTTCACCTAATATTAGAACACCCCAACGGCTTGGGGAGGGGTTGGAATCATGGTGTGGATTTTACCAGAGCATAAGGCCTACTCAGATGGGCCTTTCACTCAATATTGATATGTCTTCTGCCGCATTTATTGAGCCTCTTCCAGTAGTGGAGTTTGTTGGTCAGCTATTGGGAAAAGATGTGTTATCAAGGCCATTGTCTGATGCTGATCGTGTAAAGATTAAGAAAGCCCTTAGAGGAGTTAAAGTTGAAGTGACACACAGAGGACATGTACGAAGAAAATATCGTGTTTCAGGATTGACTTCTCAACCCACAAGAGAACTTGTGTTTCCTGTTGATGACAACTCTAATATGAAGTCAGTGATTGAATACTTCCAAGAGATGTATGGTTTCACGATTCAGCACACTCACCTCCCTTGTCTACAAGTCGGAAATCAGAAAAAGGCAAACTATTTACCTATGGAGGCCTGCAAAATTGTTGAAGGGCAACGTTGTACAAAAAGGTTGAATGAGAAGCAAATTACTGCTCTTCTGAAAGTTACTTGTCAGAGACCCCGGGATCGAGAAAATGACATTTTGCGGCAGACAGTTCATCATAATGCTTATGATCAAGATCCTTATGCAAAGGAATTTGGGATTAAAATCAGTGAAAAGCTAGCTTCTGTTGAAGCACGGATTCTTCCTGCCCCTTGGCTGAAATATCATGAAACTGGCAAAGAAAAGAACTGTTTACCCCAAGTTGGTCAGTGGAATATGATGAACAAGAAAATGATTAATGGGATGACTGTTAACCGATGGGCATGCATAAATTTTTCACGGAGCGTGCAAGATAGTGTTGCTCGCAGTTTTTGCAATGAGCTTGCTCTAATGTGTCAAGTATCTGGCATGGAATTTTATCCTGAGCCTGTGATCCCAATCTACAATGCCAGGCCAGAGCAGGTGGAGAAAGCCTTGAAGCATGTTTATCATGTGTCAGTGAACAAAACTAAAGGAAAAGAGTTAGAGCTTTTGCTAGCAATATTGCCTGATAATAATGGGTCTCTCTATGGTGATCTCAAGCGTATTTGTGAAACCGAACTTGGTTTGATATCACAATGCTGTTTGACAAAACACGTATTTAAGATCACCAAACAGTACTTGGCTAATGTTTCTCTAAAGATCAATGTTAAGATGGGAGGTAGAAACACTGTTCTACTTGATGCTATTAGCTGCAGAATACCATTAGTTAGTGACATTCCAACCATAATATTTGGAGCAGATGTTACCCACCCTGAAAATGGGGAAGACTCTAGTCCTTCAATCGCAGCTGTTGTAGCATCCCAGGACTGGCCTGAAGTTACAAAATATGCTGGTTTAGTGTGTGCTCAAGCTCACAGACAGGAACTTATACAGGATTTGTACAAAACTTGGCATGACCCAGTTCGTGGCACGGTTAGTGGCGGCATGATCCGAGATCTTTTGGTTTCCTTTAGAAAGGCAACAGGACAGAAGCCACTTAGGATTATATTTTACAGGGATGGTGTAAGTGAAGGGCAGTTTTACCAGGTTTTACTTTATGAGTTGGATGCTATCCGGAAGGCATGTGCTTCTTTAGAACCAAACTATCAGCCGCCAGTTACTTTCATTGTCGTACAAAAAAGACATCATACTAGATTGTTTGCAAACAACCACAGGGACAAGAGCAGCACAGATAGGAGTGGAAATATTATGCCTGGCACCGTCGTTGATTCTAAAATCTGTCATCCATCAGAGTTTGATTTTTATCTGTGCAGTCATGCTGGCATTCAGGGGACAAGCCGACCGGCTCATTATCATGTTCTATGGGATGAGAACAACTTCACAGCAGATGGAATTCAATCATTGACAAACAATCTGTGTTATACATATGCTAGGTGCACACGCTCTGTGTCTGTTGTTCCTCCTGCATACTATGCTCATTTAGCTGCTTTCCGAGCCCGGTTCTATATGGAACCAGAAGTTCAAGAGAACGGCTCTTCCGGTAGCGGAGGCAGTCATGGTAACAAGGTGGCAATGCGAACCGGAGAGCCCGGTGTCCGGCCATTGCCGGCCTTGAAAGAAAATGTCAAGAGAGTGATGTTTTATTGTTAGACTGCAGGACCAGTTTCCATGGGTTAGATGGATGGAGCTACATTTTAACATAGCTACAATCATGAAGTGAAATGTACATTAGTAGTGTGAAAAGTGCATAGTTCCA 3097 0.4375 MPVRQIKESSEQHLVIKTHLQNAINSVKKVPKTVQNGKGPPSQEPHNAKPHCQTSPQAKNRGRRRGRGVRKSDQGDILMRPSSRPCTVANKPVSDNQTVLANSANGSLRNGRSNCDIEMGLPNFPTSSKSLSFAPRPGYGQVGTKCIVKANHFFAELPDKDLNQYDVTITPEVSSRTVNRAIMAELVRLYKESDLGMRLPAYDGRKSLYTAGELPFTWREFKIKLIDEEDGVNGPKREREYRVVIKFVARANLYHLGQFLAGKRADAPQEALQILDIVLRELSNKRYCPIGRSFFSPNIRTPQRLGEGLESWCGFYQSIRPTQMGLSLNIDMSSAAFIEPLPVVEFVGQLLGKDVLSRPLSDADRVKIKKALRGVKVEVTHRGHVRRKYRVSGLTSQPTRELVFPVDDNSNMKSVIEYFQEMYGFTIQHTHLPCLQVGNQKKANYLPMEACKIVEGQRCTKRLNEKQITALLKVTCQRPRDRENDILRQTVHHNAYDQDPYAKEFGIKISEKLASVEARILPAPWLKYHETGKEKNCLPQVGQWNMMNKKMINGMTVNRWACINFSRSVQDSVARSFCNELALMCQVSGMEFYPEPVIPIYNARPEQVEKALKHVYHVSVNKTKGKELELLLAILPDNNGSLYGDLKRICETELGLISQCCLTKHVFKITKQYLANVSLKINVKMGGRNTVLLDAISCRIPLVSDIPTIIFGADVTHPENGEDSSPSIAAVVASQDWPEVTKYAGLVCAQAHRQELIQDLYKTWHDPVRGTVSGGMIRDLLVSFRKATGQKPLRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFIVVQKRHHTRLFANNHRDKSSTDRSGNIMPGTVVDSKICHPSEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGIQSLTNNLCYTYARCTRSVSVVPPAYYAHLAAFRARFYMEPEVQENGSSGSGGSHGNKVAMRTGEPGVRPLPALKENVKRVMFYC 996
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach2g00888 996 ProSiteProfiles PAZ domain profile. 341 455 IPR003100 GO:0005515
Bach2g00888 996 FunFam Protein argonaute-2 334 460 - -
Bach2g00888 996 MobiDBLite consensus disorder prediction 955 977 - -
Bach2g00888 996 FunFam Argonaute 10 520 693 - -
Bach2g00888 996 MobiDBLite consensus disorder prediction 26 57 - -
Bach2g00888 996 Pfam Argonaute linker 1 domain 289 338 IPR014811 -
Bach2g00888 996 CDD PAZ_argonaute_like 340 454 - -
Bach2g00888 996 MobiDBLite consensus disorder prediction 26 91 - -
Bach2g00888 996 Pfam Mid domain of argonaute 539 616 IPR032473 -
Bach2g00888 996 Pfam PAZ domain 367 471 IPR003100 GO:0005515
Bach2g00888 996 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 125 951 - -
Bach2g00888 996 CDD Piwi_ago-like 500 950 IPR045246 -
Bach2g00888 996 FunFam protein argonaute 10-like 699 996 - -
Bach2g00888 996 Gene3D paz domain 334 460 - -
Bach2g00888 996 SMART PAZ_2_a_3 345 477 IPR003100 GO:0005515
Bach2g00888 996 Gene3D - 520 693 - -
Bach2g00888 996 ProSiteProfiles Piwi domain profile. 630 951 IPR003165 GO:0003676
Bach2g00888 996 Pfam Piwi domain 631 950 IPR003165 GO:0003676
Bach2g00888 996 Pfam Argonaute linker 2 domain 481 528 IPR032472 -
Bach2g00888 996 SMART Piwi_a_2 630 951 IPR003165 GO:0003676
Bach2g00888 996 Pfam N-terminal domain of argonaute 145 279 IPR032474 -
Bach2g00888 996 Gene3D - 699 996 IPR036397 GO:0003676
Bach2g00888 996 SUPERFAMILY Ribonuclease H-like 621 951 IPR012337 -
Bach2g00888 996 SUPERFAMILY PAZ domain 335 488 IPR036085 GO:0005515
Bach2g00888 996 SMART DUF1785_2 288 340 IPR014811 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach2g00888 Bach-Chr2 18645833 18652629 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach2g00888 1 996 Eukaryotic Initiation Factors Gene Family AT5G43810 81.827 0.0 1662
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach2g00888 K11593 - cave:132176966 1808.11