Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach2g00886 ATGGGGGAAGATCGACGGTTTGATGAAAGGCGTGGTAATTTGGGAACATTGGCTGTATTTGGGATATTTCAGGCTATCTGGGTGTGGACTGTGAGTTTGCCTGTTACAGTGGTTAACGCAAGCAACCGAAATCCATTTCTACAGGTTGAGGACATTATAGGGTGGATTTTATGGTCCGTGGGATTTTTAGTTGAAGTTGCCAAGATTTCAGACAGAATACTGCAAATTGAAGGCATTTTCAGTGGGACATTGAGTTATATCTTTAACAACTTCAAAGATGGTCGAGCTTTTAGTGAGGTAGTGGCTGAAGCAAAGGAAGCAGGATATACCGAGCCAGATCCGAAGGATGATCTGTCTGGAACAGATGTTGCAAGAAAGGTGATAATTATTGCGAGGGAGTTTGGTTTAAAGCTAGAACTCTCTGATATCCCTGTTGAAAGCCTTGTACCAGAACCACTAAGAGTTAGTGCATCAGCTCAGGATGATGGACTGCTTCATACTACATGTGGAACTCCAAATTATGTTGCTCCTAAGGAGCCCTTTGTAAACATCCCAGAAGATGCAATCCGTGAAGCGCTGAAGATTCTTCTTGATGTCAGGGACCACCCAATTTTGATTCACTGTAAGCGGGGGAAGCACCGAACAGGTTGCCTTGTAGGATGCTTGAGGAAACTGCAGATGTGGTGCTTGTCTTCTGTGTTTGATGAGTACCAAAGGTTTGCAGCTGCCAAAGCAAGAGTTTCAGACCAGAGATTTGTGGAGTTGTTTGATATTTCGAGCCTGAAGCACTTGCCAATTCCACTTTCTTGTTCAAAGAGGTAG 822 0.4392 MGEDRRFDERRGNLGTLAVFGIFQAIWVWTVSLPVTVVNASNRNPFLQVEDIIGWILWSVGFLVEVAKISDRILQIEGIFSGTLSYIFNNFKDGRAFSEVVAEAKEAGYTEPDPKDDLSGTDVARKVIIIAREFGLKLELSDIPVESLVPEPLRVSASAQDDGLLHTTCGTPNYVAPKEPFVNIPEDAIREALKILLDVRDHPILIHCKRGKHRTGCLVGCLRKLQMWCLSSVFDEYQRFAAAKARVSDQRFVELFDISSLKHLPIPLSCSKR 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach2g00886 273 Gene3D Protein tyrosine phosphatase superfamily 173 254 IPR029021 -
Bach2g00886 273 Pfam Homoserine dehydrogenase 69 156 IPR001342 GO:0006520
Bach2g00886 273 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 64 158 - -
Bach2g00886 273 ProSitePatterns Tyrosine specific protein phosphatases active site. 206 216 IPR016130 GO:0016311|GO:0016791
Bach2g00886 273 Gene3D Dihydrodipicolinate Reductase; domain 2 70 172 - -
Bach2g00886 273 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 178 258 IPR029021 -
Bach2g00886 273 PANTHER - 64 161 IPR011147 GO:0004072|GO:0004412|GO:0009067
Bach2g00886 273 Pfam Protein of unknown function (DUF1295) 2 67 IPR010721 -
Bach2g00886 273 ProSitePatterns Homoserine dehydrogenase signature. 104 126 IPR019811 GO:0006520
Bach2g00886 273 Pfam Tyrosine phosphatase family 178 263 IPR004861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach2g00886 Bach-Chr2 18592903 18596242 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach2g00886 178 273 Protein tyrosine phosphatase (PTP) family AT4G03960 78.125 1.12e-54 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach2g00886 K18045 - gmx:100814279 184.111