Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach2g00872 ATGGTGGGATTAGAACTAATACCCATAGGGACCATCCTGGCTGTGCTGACCAACCAGGTCTTGAAAACTGCTCATGCAGCAGCTGATGTTCTTATTGATAAGGAAAGTTTCAAGGCCCTTTCAAAGCACCTGCTTGATATTGAACCAGTTCTAAAGGAGTTGCAGCTTCAAGAATTGAATGAGTCTGAAGCTGCAAGGGCTGCTCTGGAGTCGCTTGAAGCAGATGTTAAAAGGGCTCACAATTTGGTTGAGAAGTGCGGAAACCATGGTCGTTTCTACTTACTGGTTAGGTGCAGATATATAGTTAAGGAGGTTGAAGAAGTCACAAGGGACATTGGAAAATCTCTGGCTGCATTGTCTCTTGCAAATACTGCAGTTTTATCAAGAATTTCTGATCAGGTAAATAGACTACAGAACGAGATGCAAAGGGTGGAGTTTGAGGCTTCACAGTCTCAGCTTCAAATTGTTGACAAGTTGGACCAGGGCCTTAGGGAACAGAAACTAGATCAGGCTTTTGCGAATGACATGCTTGAGGAAATAGCAAGGGCAGTCGGTGTGCCGGTGGAACCCTCAGAGATAAGCAAAGAGCTGGCCAGCATTAGAAAGGAAAAAGATGAAGCTGCTAACAGGAAAGAAAGAGCTGAAGAAATATTTTTGGAGCAGGTAATTGAATTACTCTCTCGAGCTGATGCTGCAAGGGATTATGAAGAAGTCAAGAAGCAATACTCGGCAAGGGTTCAAGTAATAGAGCAATATGATTCAAGGGAAAGACATATCGAGCCATTTAATTCTTTCCATTGTAGCATAACCGGAAATGTTATGATAGATCCTGTCAGCCTTTGCACCGGCACTACATGTGAGAGAGCTGCCATTGAAGAATGGTTAGACCGTGGCAACAGGACTGACCCAAAAACAAAAGAGGTTCTTGAAGATACTACATTGAGGTCTAACATTCCTTTAAGACAATCCATTCAAGAATGGAGAGAACTTAATTATTGCCTTACGATTAGGTCAATCAGGGAAGACTTATTATCCGGCTCTGAATTACGTGTGCAAGAGTCCCTGACCCAAATGCAGGATCTTATAAAAGAGAATTCTATTAACAAGGATTGGATTTCTATAGGACTGCTTATTGATTTTATTATCTCTATCCTTGGGAATACTGACAACAGTGAAGTGAAGATAATGATTTTAGTTACTTTGAAGGATGCCGTAGAGGGGCATGCAAGAAACAAGGAAAAAGTGGTCGAATCTGATGGATGGGATCACATTATCAGCTGCTTGGGGAGTGAGCCTAGCATTTCAAAGGCAGCGATTGACCTGTTGTATGAGTTACTGCAAGATCGATCTGGTTGGAATGTGTCTTTATGCAGAAAACTCTCTCATAATAGTAGTGCAGTTCGTTTCCTTGTTAGCCTTCTAAAGGGTCCTGTCAATGAGTCATCTGAGATTGCAGAAGAGATATTGAAAGAGCTTTTTGACGTTGATGAGGACAACATTTCTAGTGCTGCTAAGTTTGGCTGGTATAAGCCACTTGTTAATCACTTGGTTAGAGGATCAGAATCTTCAAGAATATTAATGGCAAAAACAATAGTTAATTTGGAGTTGAATGATTTAGATTTGACACTCCTTGGCGAAGAAGGAGTTATACCTCCTTTGCTTGAAATGCTGGCTGGTAGTATTGAATCAAAAGAATTGTCATTATCCGCTCTGGTTAAATTAGCAGGTTCTTATGCCAATAAGAGGATTATTGCTGCATCTGGAGGTGTTCCTCTTATCATAGAATTGTTGCTATCTCCTCGCACTAAGACATTTATCACCATTAAATGCTCTGAAATTCTTGAGAAGCTTTCTTGTGATGATGATGGAATTGATTTCTTTGTTGATGGAGAAGGGAAACAACTTGAGTTAGATTCAATTATCACCCATTTATTAAGTTTGCAACTGAGTCCCAACTCAGCCCACAATGTCCGTAAGCCTGCATTGCGTGCACTTCTTGGGATTTGCAAATTTGACACAGATTTAGTTAAGAAGGCAGTTCTTGCTGCCAATGGTGTGTCTCTAATTCTTCCCCTTCTTGATGATTCTGATTCAGAAATTAGGGAGACCGCCATTAATCTGCTCTTTCTGTTCTCTCAGCATGAGCCAGAAGGTGTAGTTGAATACCTTTTCAGGCCTAGAAGACTAGAAGCTTTAGTTGGATTTCTTGAGAATGATGATAATAATGATGTACAGATGGCTGCAGCTGGTTTGCTAGCTAACCTGCCGAAATCAGAAAGAGAGCTAACCATGAAGTTGATTAAGTTAGGAGGACTTGATGCAATCATAAGAATTTTGAAAACTGGCACAATGGAAGCAAAAGAAAATGCTCTCAGTGCACTCTTCAGGTTCACAGATCCCACAAATATTGAGTCACAGCGTGATTTGGTCAGACGTGGAATATATCCTTTGCTTGTGAGTTTTCTCTCTACTGGTTCAGTTACAGCAAAGGCAAGAGCAGCTGCATTCATTGGTGATCTTTCTATGAGCAGTCCAAAGCTCACAGTTGTCTCCGAAGCCACTGGTTGCTGGTGTTTCAGATCGTCACGAGTTCCTTTATGTCAAGCTCATGGGAGTGTATGCAGTGTGGATACCACCTTTTGTCTGTTGGAGGCAAATGCTTTGCCTGGCCTTGTAAAGCTGTTACATGGGGAGGTTTATGCAACTGCTTATGAAGCAATACAGACACTTTCCACCTTGGTTTTGGAAGACTGCCCCCCTCAGAGGGGAGCCCGTGTTTTGCATGACGCTGATGCAATAAGACCCCTATTGGAGATTTTGATTTGGGGGAGTGACCCTCTTAAGGCAGAAGTTCTAGGTCTCTTGGAGAAGGTCTTTGTGTCAAAGGAAATGGTGGAATACTACGTATCAACGGCTAGATCGCGTCTAGTTGGCCTCACTGGCAGAAATATTCATGGGGAAGGCCACATAAGGAGGAAGGCTGCCAAGGTATTGTCATTGCTTGAACGCTATTCTAGGTCATCATCAGCTGCCGTATCAGGAGTTTTAGAATAA 3054 0.4208 MVGLELIPIGTILAVLTNQVLKTAHAAADVLIDKESFKALSKHLLDIEPVLKELQLQELNESEAARAALESLEADVKRAHNLVEKCGNHGRFYLLVRCRYIVKEVEEVTRDIGKSLAALSLANTAVLSRISDQVNRLQNEMQRVEFEASQSQLQIVDKLDQGLREQKLDQAFANDMLEEIARAVGVPVEPSEISKELASIRKEKDEAANRKERAEEIFLEQVIELLSRADAARDYEEVKKQYSARVQVIEQYDSRERHIEPFNSFHCSITGNVMIDPVSLCTGTTCERAAIEEWLDRGNRTDPKTKEVLEDTTLRSNIPLRQSIQEWRELNYCLTIRSIREDLLSGSELRVQESLTQMQDLIKENSINKDWISIGLLIDFIISILGNTDNSEVKIMILVTLKDAVEGHARNKEKVVESDGWDHIISCLGSEPSISKAAIDLLYELLQDRSGWNVSLCRKLSHNSSAVRFLVSLLKGPVNESSEIAEEILKELFDVDEDNISSAAKFGWYKPLVNHLVRGSESSRILMAKTIVNLELNDLDLTLLGEEGVIPPLLEMLAGSIESKELSLSALVKLAGSYANKRIIAASGGVPLIIELLLSPRTKTFITIKCSEILEKLSCDDDGIDFFVDGEGKQLELDSIITHLLSLQLSPNSAHNVRKPALRALLGICKFDTDLVKKAVLAANGVSLILPLLDDSDSEIRETAINLLFLFSQHEPEGVVEYLFRPRRLEALVGFLENDDNNDVQMAAAGLLANLPKSERELTMKLIKLGGLDAIIRILKTGTMEAKENALSALFRFTDPTNIESQRDLVRRGIYPLLVSFLSTGSVTAKARAAAFIGDLSMSSPKLTVVSEATGCWCFRSSRVPLCQAHGSVCSVDTTFCLLEANALPGLVKLLHGEVYATAYEAIQTLSTLVLEDCPPQRGARVLHDADAIRPLLEILIWGSDPLKAEVLGLLEKVFVSKEMVEYYVSTARSRLVGLTGRNIHGEGHIRRKAAKVLSLLERYSRSSSAAVSGVLE 1017
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach2g00872 1017 Gene3D - 867 1001 IPR011989 -
Bach2g00872 1017 Gene3D - 639 857 IPR011989 -
Bach2g00872 1017 Gene3D - 336 630 IPR011989 -
Bach2g00872 1017 SMART arm_5 875 915 IPR000225 GO:0005515
Bach2g00872 1017 SMART arm_5 577 619 IPR000225 GO:0005515
Bach2g00872 1017 SMART arm_5 629 670 IPR000225 GO:0005515
Bach2g00872 1017 SMART arm_5 802 842 IPR000225 GO:0005515
Bach2g00872 1017 SMART arm_5 408 447 IPR000225 GO:0005515
Bach2g00872 1017 SMART arm_5 759 799 IPR000225 GO:0005515
Bach2g00872 1017 SMART arm_5 919 960 IPR000225 GO:0005515
Bach2g00872 1017 SMART arm_5 673 713 IPR000225 GO:0005515
Bach2g00872 1017 SMART arm_5 537 576 IPR000225 GO:0005515
Bach2g00872 1017 SMART arm_5 715 757 IPR000225 GO:0005515
Bach2g00872 1017 Pfam U-box domain 264 329 IPR003613 GO:0004842|GO:0016567
Bach2g00872 1017 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 588 632 IPR000225 GO:0005515
Bach2g00872 1017 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 240 335 IPR013083 -
Bach2g00872 1017 Pfam MCAfunc domain 24 154 IPR045766 -
Bach2g00872 1017 SUPERFAMILY RING/U-box 248 330 - -
Bach2g00872 1017 SMART Ubox_2 264 327 IPR003613 GO:0004842|GO:0016567
Bach2g00872 1017 SUPERFAMILY ARM repeat 652 1002 IPR016024 -
Bach2g00872 1017 Coils Coil 127 154 - -
Bach2g00872 1017 ProSiteProfiles RPW8 domain profile. 1 153 IPR008808 -
Bach2g00872 1017 CDD MLKL_NTD 10 145 - -
Bach2g00872 1017 Gene3D - 8 123 IPR036537 GO:0007166
Bach2g00872 1017 SUPERFAMILY ARM repeat 378 719 IPR016024 -
Bach2g00872 1017 CDD RING-Ubox_PUB 265 314 IPR045210 -
Bach2g00872 1017 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 727 755 IPR000225 GO:0005515
Bach2g00872 1017 ProSiteProfiles U-box domain profile. 260 334 IPR003613 GO:0004842|GO:0016567
Bach2g00872 1017 Coils Coil 197 217 - -
Bach2g00872 1017 Coils Coil 62 82 - -
Bach2g00872 1017 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 11 1009 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach2g00872 Bach-Chr2 18351372 18355769 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach2g00872 262 964 U-box Gene Family AT1G76390 26.969 1.12e-40 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach2g00872 - - gmx:100783638 1522.68