Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach2g00860 AATAAACCATTTTTAGAGAGAGAAAGTAAAGTAGAGTCTGCCTTGTGCCCAAAAATGGCAACTTTGCTTGGGAAGGAGCATGGCTTGAATCTGAAGGAGACTGAGCTGTGTTTGGGATTGCCCGGTGGCGGTGACGGGGGTGGAACTGATCAGGTCGAGACCCCCAAGGCCACCGGAAAGAGAGGTTTCTCTGAGACTGTTGATCTCAAGCTTAACCTTCAATCCAAGGAAGATCTAAATGAGAATTTGAAGAATGCTTCAAAGGAGAAGAGCCTTCTCAAGGACCCTGCTAAGCCCCCAGCCAAGGCTCAAGTGGTGGGGTGGCCACCAGTGCGTTCCTACAGGAAGAACGCAATGGCACAGAAGGTTAACAATGAAGATGGGAATAGTGAGAAGAAAACAAGCGGCAGCACTACTACTTCTGTTGTTTCTGCAGGAGCATTTGTGAAGGTTTGCATGGATGGGGCACCCTACCTTCGTAAGGTGGACTTGAAAATGTACAAAAGCTACCAAGAACTGTCTGATGCCTTGGCCAAGATGTTCAGCTCCTTCACCATGGGTGAATATGGGACCCAAGGAATGATAGACTTCATGAATGAGAGCAAGTTGATGGATCTTCTGAACAGCTCTGAGTATGTACCAACCTATGAAGATAAGGATGGTGACTGGATGCTCGTGGGTGATGTCCCATGGGAGATGTTTGTTGAGTCATGTAAGCGTCTGCGAATTATGAAAGGATCAGAAGCTATTGGACTTGCCCCAAGAGCCATGGAAAAATGCAAAAGCAGAAGCTGA 795 0.473 MATLLGKEHGLNLKETELCLGLPGGGDGGGTDQVETPKATGKRGFSETVDLKLNLQSKEDLNENLKNASKEKSLLKDPAKPPAKAQVVGWPPVRSYRKNAMAQKVNNEDGNSEKKTSGSTTTSVVSAGAFVKVCMDGAPYLRKVDLKMYKSYQELSDALAKMFSSFTMGEYGTQGMIDFMNESKLMDLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGSEAIGLAPRAMEKCKSRS 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach2g00860 246 Gene3D - 123 240 - -
Bach2g00860 246 ProSiteProfiles PB1 domain profile. 128 228 IPR000270 GO:0005515
Bach2g00860 246 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 11 233 IPR003311 GO:0005634|GO:0006355
Bach2g00860 246 Coils Coil 48 71 - -
Bach2g00860 246 MobiDBLite consensus disorder prediction 101 120 - -
Bach2g00860 246 FunFam Auxin-responsive protein 123 238 - -
Bach2g00860 246 MobiDBLite consensus disorder prediction 23 46 - -
Bach2g00860 246 SUPERFAMILY CAD & PB1 domains 119 227 - -
Bach2g00860 246 Pfam AUX/IAA family 38 237 IPR033389 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach2g00860 Bach-Chr2 18223938 18225955 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach2g00860 126 236 B3 DNA Binding Superfamily AT4G23980 32.432 2.56e-08 52.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX or IAA Bach2g00860 AUX_IAA 1e-83 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach2g00860 K14484 - gmx:100810762 390.578