Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach2g00827 ATGGAGTCTAATCCCATCGGAGAAGAAGAAAAGATCAAGAAGGTTCGGTCACAAACCGGCTTGGAAGTCCCAGAATCGCTTATCCTCAAAGCGCATTCAGAATCTGGGTATAACCCTGATGACAATGTGAAATTTCTGAGCGATGATAATCATGGTTTATCGGTTCCACCGTCGGCGGTGATTCGGACGACCACAAGCTCCGGTGGGGTTCGGGTTTCGGCTCCGTGTGACCAAAAGCGAATAGATGATTGTGAAGCAGCACAACCGCTAGACGAACTAACTCTAAAGAACGAGGTAAAGGAAGAGTTTGATGTCAGCTTTGATCAGCAAAGAGAATATATGGCTTCCAATGGTTCTCAGCTACTGGTTGTAGAAGACTCAGAAGCTACGAAAACGTCTTTCGACGAGTTTCTTATGGCTACGAATACTAAAGTCCTGTCGGAGGAAGAAGCAAGGACTCAGTTGAATCCCGGGATTGGAGTCAAAGAAGCTGATTTGGATACGAAGGAACTGGTGATTGAAGAGAAACTCCAAAAGGTTCGATTGCAAGTCGGGTCTGAAGTTCGGAAACCGGTTATTCTCAAAGCGCTAGCAGAATCTCGAAACGACCCAGATGCTGCCGTGAAGTTTCTCAATGATAATCCAGGGTTCTTGGCCCGACCGTTGACGGTGATCCCACATTCGACTACGATTAAACAAAAGCAGTTAGACGAATGTAAAGCAGCACAACCACTTGATGTATTGTCTCTGAACGGCAAGGTTGGGGAGGAGTTTGATGTTGGGTTCCAAAAGCATGTCTCTGTGAAAAAAGAAATGGGTTCTGATACTTCTCTGCCATTAGGATCACAGAACGAGATGGAAGGGATGAAAGCGAAAGAGGAGTGCGATGAGTCAGACGCTTGGAAAATAACTTTACAAGAGTTCCTTCAGGCTACTAATACTAAACTCCAACCAGAGGAGGAAGCAAAGGCGGAGGTTAAACTTGGGGCGTTAGATAGTTATAGTAATCAGCAACTGATGAAGAGAACCAGTGAAATGCCAGAAAAGAAACCGAATGATTATCCTGTGATGATTTCGGGCAGGGAACGAGTGAAAACGGAACCTGCTACCTCTGATTGCTTTGAAATAGAGGCGTTCAAGCGACAACTTACAGTGGAACCTTTCCCGGGTCTCGTGAAACCTTACCAAGTGAAGATAGAAAGAATTGAAGATAAAATGGCCAAGCCTGCTGATGTAGAGGACGGGGACTTTCCAGAAGAGCCGGAGTGGTTTTTGATTGGAAGGTCATTTAAAGATGCGGTCTCAACCACCAAAGGCAGGAAATTGGTAGACAATGAGATTGTGTATTTCAACTTTCCTCCTCCGGCTGGAAGATACAATTCTAATTGTATTGTTCGCATTTCAACCAAACGATCTGGAGAGATTGGAAGGCTTCCTATGGAATTGGCCAAATGCATCATTCCGCTTGTGCGTGCTTCCAAGGTTAAAGTTCGAGGCCGATGTGTAGCTGCACCGCTGAGCCTTCAAATGATGCAAAACTTCACGTTGTGCCTAAGCTTTTACATTCACCATTCCATATTCTCGGAGGGTGACGATAAAAATTCTTTCAGGCTAGATGCTTGCGCTAACAGTGACTCTACTATGTATCCTCTCCTTACATTGCTCAAATTGCTGGAGCTTCAGCCATATCGGAAGGCTGATTTTACCCCTGAGGATCTTAATTCTCGTAAGCGGTTGCTTGTTTTGGAGGTATGTGAAGCTGCATCAGCATTGCCTGCGATGAAGAGAAGAAGGGGTTCCCAACAGGATTCGGAACAAGACATGGATGTACAAGCTATTTCAGAGTCTTCTCTGAATAAACTTGTTGGAGCTGCAGAAGTCTATGACTTGAAGGAGATGGAACCCTCAAGCACATTAATGTGTCAATTGAAGCCTTACCAGAAACAAGCTCTCTATTGGATGTCAGAATTAGAAGAAGGTATTGACGTTCAAAATGCTGCAAAAACTCTTCATCCTTGCTGGGCTGAATATCGTATATGTGATAGGGCTTCCTCAATTTACCTGAACAACTTCTCAGGGGAAGCAACAACACGATTTCCAGCAGCAACACAGATGGCAAGAGGAGGAATTCTTGCAGATGCGATGGGACTTGGAAAGACTGTTATGACCATTGCTCTAATTCTTGCAAGACCGTTCATGGGGAGCTCAGAAAACAAGGATGCGGAGAATAATACTGAAGTTACAAAGAAGAGGAAGAAGGATTCTCATATTATCACCAAATTCAAACCACAGGGTGGCACTCTCATTGTTTGTCCCATGGCTTTGCTAGGTCAATGGAAGGATGAGCTTGAAACTCATTCAGAGCCAGAATGTATATCCATATTTGTTCACTATGGTTGCGGTAGAACCGATAACCCTGAGATGCTCTCTGAACATGATGTTGTCTTGACAACATATGGTGTTCTACAAGCGGCATATAAACATGATGGAGAGAATAGCATTTACAACAGAATCAATTGGTATCGGGTGGTTCTAGATGAAGCTCATACCATTAAGGCGTATAAAAGCCAGGCTGCCCAGGCTGCTTTTACTTTGTCCTCACACTGCCGCTGGTGTCTAACAGGAACTCCTATTCAGAATAGTTTGGAAGACCTGTACAGCCTCCTGAGCTTCTTGCATGTCGAACCATGGTGCAATTGGGCTTGGTGGAATAAATTGATCCAAAAGCCTTATGAGAATGGTGATACAAGGGCCTTGAAATTGGTCAAGGCCATTTTGAGGCCACTGATGTTAAGAAGAACGAAGGATACAAAGGATAAGCAAGGAAGGCCCATTCTTGTGCTTCCACCAACTGATATTCAAGTAATTGAGTGTGAACAATCAGAAGCTGAACATGACTTTTATGATGCCCTCTTCAAGCGATCTAAAGTACAATTTGACCAGTACGTTGCACAAGGCAAGGTTCTTCACAACTATGCTAACATCCTTGAGCTACTATTACGATTGAGGCAATGTTGTAACCATCCATTTCTGGTCATGAGTCGATGCGATACACAGAAGTATGCAGACTTGGACAAGCTTGCGAGCAAATTCCTCGAGAGTAATTCTGATTCTGCTTCTGTCCCATCCCTTGCATACATTGAAGAGGTTGTGGATGGTGTCAGGAAGGGAGAAAACAAAGAGTGCCCCATATGCTTGGAGTCTCCAGATGACCCTGTGTTCACCCCTTGTGCACATATGATGTGCAGGGAATGCTTACTCTCTAGCTTGAAGACCCCAACAGGTGGTCGATGTCCAATATGTCGCAAATGGGTCAAGAAAACTGATCTTATTACTTGTCCATCAGAAAACCGGTTCAGACTTGATGTTGAGAAGGAATGGAAGGAGTCTTCAAAGGTTTCAAAGCTTTTGGAGCGCTTGGAAAGCATTAAGCGGTCAGGCTCTGGTGAAAAGAGTATTGTTTTCAGCCAATGGAGTTCATTTTTTGATCTCCTAGAAATCCCATTGAAGAAGAAAAAGATTGGCTATTTAAGGTTTGATGGGAAGTTGTGTCTCAAAAGCAGAGAGAGAATTTTGAAGGAATTTAGCGAGACAAGAGAGAAAAGGGTTTTATTGATGTCTCTCAAGGCTGGTGGAGTGGGCTTGAATCTAACTGCAGCATCAAATGTCTTCCTCATGGATCCCTGGTGGAATCCAGCAGTAGAGGAGCAAGCCATTATGAGAATCCACCGTATAGGACAAAAGAGAACAGTTCGTGTTAGAAGATTCATCGACACTGTTGAGGAACGTATGCAACAAGTGCAGGCCAAGAAGCAGAGAATGATCTCTGGAGCCCTCACTGATGAGGAGGTTCGTTCTGCAAGAATTGAAGAACTCAAAATGCTATTTAGATGA 3894 0.4409 MESNPIGEEEKIKKVRSQTGLEVPESLILKAHSESGYNPDDNVKFLSDDNHGLSVPPSAVIRTTTSSGGVRVSAPCDQKRIDDCEAAQPLDELTLKNEVKEEFDVSFDQQREYMASNGSQLLVVEDSEATKTSFDEFLMATNTKVLSEEEARTQLNPGIGVKEADLDTKELVIEEKLQKVRLQVGSEVRKPVILKALAESRNDPDAAVKFLNDNPGFLARPLTVIPHSTTIKQKQLDECKAAQPLDVLSLNGKVGEEFDVGFQKHVSVKKEMGSDTSLPLGSQNEMEGMKAKEECDESDAWKITLQEFLQATNTKLQPEEEAKAEVKLGALDSYSNQQLMKRTSEMPEKKPNDYPVMISGRERVKTEPATSDCFEIEAFKRQLTVEPFPGLVKPYQVKIERIEDKMAKPADVEDGDFPEEPEWFLIGRSFKDAVSTTKGRKLVDNEIVYFNFPPPAGRYNSNCIVRISTKRSGEIGRLPMELAKCIIPLVRASKVKVRGRCVAAPLSLQMMQNFTLCLSFYIHHSIFSEGDDKNSFRLDACANSDSTMYPLLTLLKLLELQPYRKADFTPEDLNSRKRLLVLEVCEAASALPAMKRRRGSQQDSEQDMDVQAISESSLNKLVGAAEVYDLKEMEPSSTLMCQLKPYQKQALYWMSELEEGIDVQNAAKTLHPCWAEYRICDRASSIYLNNFSGEATTRFPAATQMARGGILADAMGLGKTVMTIALILARPFMGSSENKDAENNTEVTKKRKKDSHIITKFKPQGGTLIVCPMALLGQWKDELETHSEPECISIFVHYGCGRTDNPEMLSEHDVVLTTYGVLQAAYKHDGENSIYNRINWYRVVLDEAHTIKAYKSQAAQAAFTLSSHCRWCLTGTPIQNSLEDLYSLLSFLHVEPWCNWAWWNKLIQKPYENGDTRALKLVKAILRPLMLRRTKDTKDKQGRPILVLPPTDIQVIECEQSEAEHDFYDALFKRSKVQFDQYVAQGKVLHNYANILELLLRLRQCCNHPFLVMSRCDTQKYADLDKLASKFLESNSDSASVPSLAYIEEVVDGVRKGENKECPICLESPDDPVFTPCAHMMCRECLLSSLKTPTGGRCPICRKWVKKTDLITCPSENRFRLDVEKEWKESSKVSKLLERLESIKRSGSGEKSIVFSQWSSFFDLLEIPLKKKKIGYLRFDGKLCLKSRERILKEFSETREKRVLLMSLKAGGVGLNLTAASNVFLMDPWWNPAVEEQAIMRIHRIGQKRTVRVRRFIDTVEERMQQVQAKKQRMISGALTDEEVRSARIEELKMLFR 1297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach2g00827 1297 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 700 895 IPR014001 -
Bach2g00827 1297 Pfam HIRAN domain 428 516 IPR014905 GO:0003676|GO:0008270|GO:0016818
Bach2g00827 1297 SUPERFAMILY RING/U-box 1055 1107 - -
Bach2g00827 1297 Pfam SNF2-related domain 646 1011 IPR000330 GO:0005524|GO:0140658
Bach2g00827 1297 Gene3D - 949 1297 IPR027417 -
Bach2g00827 1297 SMART ring_2 1062 1101 IPR001841 -
Bach2g00827 1297 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 630 933 IPR027417 -
Bach2g00827 1297 CDD DEXDc_SHPRH-like 643 933 - -
Bach2g00827 1297 ProSitePatterns Zinc finger RING-type signature. 1077 1086 IPR017907 -
Bach2g00827 1297 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1055 1111 IPR013083 -
Bach2g00827 1297 Pfam Helicase conserved C-terminal domain 1133 1246 IPR001650 -
Bach2g00827 1297 SMART ultradead3 639 912 IPR014001 -
Bach2g00827 1297 Pfam Zinc finger, C3HC4 type (RING finger) 1059 1107 - -
Bach2g00827 1297 FunFam DNA repair protein RAD5B 697 934 - -
Bach2g00827 1297 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 1132 1297 IPR001650 -
Bach2g00827 1297 Gene3D - 695 934 IPR038718 -
Bach2g00827 1297 SMART helicmild6 1163 1246 IPR001650 -
Bach2g00827 1297 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 946 1286 IPR027417 -
Bach2g00827 1297 SMART HIRAN_2 426 522 IPR014905 GO:0003676|GO:0008270|GO:0016818
Bach2g00827 1297 PANTHER TRANSCRIPTION TERMINATION FACTOR 2-RELATED 416 1297 - -
Bach2g00827 1297 ProSiteProfiles Zinc finger RING-type profile. 1062 1102 IPR001841 -
Bach2g00827 1297 CDD SF2_C_SNF 1126 1257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach2g00827 Bach-Chr2 17731643 17738534 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach2g00827 364 1297 RAD5 or RAD16-like Gene Family AT5G43530 67.407 0.0 1293
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Bach2g00827 SNF2_N 3.2e-82 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach2g00827 K15505 - qsa:O6P43_003250 1466.83