Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach2g00790 ATGGCCTCTTCTTCAGCCTCCTTCTCTGGCATTCCTGCTTCTTCCTGCGGGAAGACTTGTGGCCTTTGTCACCGCGTGACACCATCAATGCCGCTTAATTGTGGAGCTAGAAGGCTCCGAAAGAGCTCTTTGAAGTCACGCATTTGTGCCGCCCTTGGCGATCAGAACGCGTTACAGTACTGGAAGCTCGGCGACTCCAACCTTAACATTAGTGAAATCACTTTTGGTACTATGACATTTGGGGAACAAAATACAGAGAAAGAAGCTCATGACATGCTTGGTTATGCATTTGAGCGTGGAATTAATATTCTTGATACTGCTGAGGCTTATCCACTTCCAATGAACAAAGAGACGCAAGGAAAAACTGATCTATATATTGGTAGCTGGCTCAAGTCTCGATCTCGGGACAAGGTTATTTTAGCAACGAAAGTATGTGGTTATTCTGAGAAGTTAAGTTATTTACGTGACAATGCAAAAGTTTTGCGGGTTGATGCTGCAAATATCAGAGAAAGTGTAGAGAAAAGCCTTAAGCGCCTTGGCACTGATTATATTGATTTGTTGCAAATTCACTGGCCAGATCGCTATGGAGCATTGTATGGTGAGTTTTACTATGATGCTTCCAAATGGAGGCCCAGTGTACCGTTTGTGGAGCAGCTGCAAGCTTTTCAAGAACTTGTTAATGAAGGAAAGGTACGCCATATAGGTGTTTGCAATGAGACTTCATACGGAGTCATGGAGTTTGTCCATGCAGCTAAACTTGAAGGACTTCCAAAGATTATCAGTATCCAAAACAGCTACAGTTTGCTTGTTAGATGCCGTTTTGAGGTTGATCTTGTCGAAGTTTGCCACCCAAAAAATTGCAGTATTGGTTTACTAGCCTATTCCCCACTTGGAGGTGGATCACTGTCAGGAAAATATATTGATATAAATTCTGCAGCTGCAAAAAAGGGAAGACTGAACCTCTATTCTGGCTACATGGAAAGATACAACCAATTTCTATCACGGGAAGCAACAACAAAGTACGTCGAGTTGGCAAAGGAGCATGGCCTCACACCAGTTGAGCTTGCACTGGGATTTGCTGTCTTTAAAAGATATTTACGCCCTGAAAAGGATTATCTTTCATTTTCACTTATTTATAATAACGGTGAACAATCACTTGATCTGATCTGCAAGGACGAAGCGGAGACAGAATTATGGTTTGGAGCCCTTAAGAAAATATCTTCTGGGCAGTGCAATAGGCGTACGAGAAGTGACCTTTCTGATGATAGTAGTGATTTCAGTGGACGTCCTTCTAGTGCAATACTAGAGTCTTCTTCAAGCATCAACCGTGGTAGGATCTCTGTTGATTTAGCTTCTCGCAAATCTCCATTCTTTTTGGCAAGCTCAGATGTGGGGTCAAATATGCAACAAAGGAGTAGTATTTCTGGAGATGGTTTCCGTGTCAGTGTGTCAAGTACTCCAAGCTGTTCAAGTGGAGGATATGGACCAGATGACATAGAGTCACTTGGTGATGTTTATATATGGGGAGAGGTTTGGGGAGAAGGGATTTCACCTGATGGATCGGTGAGTCATGCTCCTTCAAAGACAGATGTGTTGCTTCCTAAGCCCTTGGAGTCAAATGTTGTTCTTGATGTTCAACAGATTGCTTCTGGTGTGAAACACATTGCTCTAGTTACAAGGCAAGGAGAGGTTTTTACATGGGGAGAGGAATCTGGGGGAAGACTTGGGCATGGTATTGATAAAGACTTTGGTGGTCCCCATCTTGTTGAGTCACTGGCAGTTACTAATGTGGAGTTTGTTGCATGTGGAGAGTATCATACATGTGCCTTATCTGCATCTGGTGATCTATTTACTTGGGGTGATGGTACACATAATACTGGACTTTTAGGCCATGGAACTGATGCTAGTCACTGGATACCTAAGAGGGTTACTGGCCCATTAGAAGAACTTCAAGTTTTATCCATTGCTTGTGGGACATGGCACACAGCATTGGCAACTTCCAATGGAAAGCTGTTCACTTTTGGTGATGGAACATTTGGTGTCTTGGGCCATGGAGATCGGCAGAGTGTGTCATATCCAAAGGAGGTACAATTATTGAGTGGACTAAAGACTATTAAGGTTGCCTGTGGAGTATGGCACACTGCAGCTATTGTAGAGGTTATGTTTCAGTCTGGTTCAAGTGCTTCATCCAGGAAGCTCTTCACTTGGGGTGATGGCGACAAATATCGTCTGGGACATGGAAACAAGGAAACCTACCTTCAACCTACCTGCGTCTCTGCATTTATTGAGTATAATGTCCACCAGATTGCATGTGGGCACACTATGACTGTTGCACTCACTACATCAGGTCATGTTTTTACTATGGGAAGTTCTTCTTATGGCCAATTAGGGAATCCTAACTCTGATGGAAGAACACCTGTCTTAGTACAGGATAAGTTGGTTGGTGAATTTGTTGAGGAAATATCATGTGGAGCACATCATGTTGCAGTCTTGACTTCAAGAAGTGAACTATGCACTTGGGGAAGAGGTGCCAATGGAAGATTGGGACATGGAGACGTAGAAGACCGGAAGTCTCCAACATTGGTCGAAGCCTTGAAAGATAGGCATGTGAAGAATATCTCATGTGGCTCAAACTTCACATCCTGTATATGCCTCCATAAATGGGTTTCTGGAACTGACCAATCTGTTTGCTCTGGTTGCCGTCAAGCATTCGGTTTTACTAGAAAAAGGCACAATTGTTATAATTGCGGATTGGTGCATTGCCATGCTTGCAGTTCCAGAAAAGCTTATAAAGCAGCACTGGCTCCAACACCAGGAAAACCACATCGTGTGTGTGATGCTTGTTTTTCCAAGCTTAAAGCTGCGGAGGCTGGTAGTGCTTCCACTTTTAACAGAAAAGTTACTCCTCCTCGTCGTTCCATAGATGGCAGTGGCAGGGATAGAGTAGACTTTCGAGAGATAAAATCTTCAAGAACTCTCTTATCTCCCATCACTGAACCAGTGAAATACCTTGAGATAAAGACAGGGAAGCCTGGATCGAAATATGCTTCTTCTTCAATAGTTCGAGCTTCTCAAGTTCCATCACTTTTGCAATTAAAAGATATTGCTTTTCCAAGTTCATTGAGTGCCATTCAGAATGCTTTCAAGCCTGTCATACCTCCACCAAGTCCACCAATCACCCCACCTGCGCAATCAAGACCTGCATCGCCATATGCGAGACGACCAAGCCCACCACGTTCTGCCACTCCTGGATTTTCTAAAAGCCTTATTGACAGTTTGAAGAAGACAAATGAGCTTTTGAATCAAGAAGTCTCGAAATTGCAGAACCAAGTACGAAGTTTGAAGAAGAGGAGTGGCTTCCAAGATGTAGAGATTCACAAGCTTCAGAAAAGAGTTGACGAAACCACCAAATTGACCGGAGAGGAATCTTCTAAACATAGAGTAGCAGAGAGTTTTATTAGGTCCATCACAGATCAGTTGAAGGAAATTGTTGAGAGGTTGCCACCAGACTTTTCAGATGGTGAAACCTTAAGAACCATGCATGCTCAGGCTGAAGAATTTCTAAAGGAAGATCAGGAATCTGAAGCATCTTCTTCCTCGCCAGAAAACTTGTCTAACCAGCAAAATGCACCGGATATTACAGCCACAGAAACTGACTCTTCTAAACTGCAAGAACAAGGAACGGAAGAAAATGTACATGCTGCTGGAGCTTGTCCATCTCAAGATGGAGGGAATACTCCTCAAGAAAGTAATACACCATCTGTATCTAGTACAGAAGAAGCAGCAATGCCTCGACAAAGTGTAGAAAATGGTTCAAGATCACCAAATCACTCTTCAAGATTTGGGAGAGAAGGAGGAAAACAAATCATTGAACAATTTGAACCTGGTGTTTTTGTGAATCTCATAGTACTACCCAGTGGTACCAAACTTTTCAAACGAGTTAGATTCAGTAAGCGAAGGTTCGATGAACAGCAGGCAGAAGAATGGTGGAACCAAAACAAAGATAGGGTGCTTAGGAGATATAATCCGTTGTCGTCATCATCATCAACAAATCCTACAACTACTGCCTCATCTAGCACCCCAACATCACCATCAACAAATCCTGCAACTATTGCCTCATCTAGCACCCCAACATCATCATCAACAAATCCTGCAACTGCTGCCTCATCTAGCACCCCAGCATCATCATCAACAAATCCTGCAACTACTGCCTCATCTAGTAACCCAACACCACCACCTGCTGAAGAAAATGGTGAGGCATCTTCTCCGGGAACTTAG 4278 0.4327 MASSSASFSGIPASSCGKTCGLCHRVTPSMPLNCGARRLRKSSLKSRICAALGDQNALQYWKLGDSNLNISEITFGTMTFGEQNTEKEAHDMLGYAFERGINILDTAEAYPLPMNKETQGKTDLYIGSWLKSRSRDKVILATKVCGYSEKLSYLRDNAKVLRVDAANIRESVEKSLKRLGTDYIDLLQIHWPDRYGALYGEFYYDASKWRPSVPFVEQLQAFQELVNEGKVRHIGVCNETSYGVMEFVHAAKLEGLPKIISIQNSYSLLVRCRFEVDLVEVCHPKNCSIGLLAYSPLGGGSLSGKYIDINSAAAKKGRLNLYSGYMERYNQFLSREATTKYVELAKEHGLTPVELALGFAVFKRYLRPEKDYLSFSLIYNNGEQSLDLICKDEAETELWFGALKKISSGQCNRRTRSDLSDDSSDFSGRPSSAILESSSSINRGRISVDLASRKSPFFLASSDVGSNMQQRSSISGDGFRVSVSSTPSCSSGGYGPDDIESLGDVYIWGEVWGEGISPDGSVSHAPSKTDVLLPKPLESNVVLDVQQIASGVKHIALVTRQGEVFTWGEESGGRLGHGIDKDFGGPHLVESLAVTNVEFVACGEYHTCALSASGDLFTWGDGTHNTGLLGHGTDASHWIPKRVTGPLEELQVLSIACGTWHTALATSNGKLFTFGDGTFGVLGHGDRQSVSYPKEVQLLSGLKTIKVACGVWHTAAIVEVMFQSGSSASSRKLFTWGDGDKYRLGHGNKETYLQPTCVSAFIEYNVHQIACGHTMTVALTTSGHVFTMGSSSYGQLGNPNSDGRTPVLVQDKLVGEFVEEISCGAHHVAVLTSRSELCTWGRGANGRLGHGDVEDRKSPTLVEALKDRHVKNISCGSNFTSCICLHKWVSGTDQSVCSGCRQAFGFTRKRHNCYNCGLVHCHACSSRKAYKAALAPTPGKPHRVCDACFSKLKAAEAGSASTFNRKVTPPRRSIDGSGRDRVDFREIKSSRTLLSPITEPVKYLEIKTGKPGSKYASSSIVRASQVPSLLQLKDIAFPSSLSAIQNAFKPVIPPPSPPITPPAQSRPASPYARRPSPPRSATPGFSKSLIDSLKKTNELLNQEVSKLQNQVRSLKKRSGFQDVEIHKLQKRVDETTKLTGEESSKHRVAESFIRSITDQLKEIVERLPPDFSDGETLRTMHAQAEEFLKEDQESEASSSSPENLSNQQNAPDITATETDSSKLQEQGTEENVHAAGACPSQDGGNTPQESNTPSVSSTEEAAMPRQSVENGSRSPNHSSRFGREGGKQIIEQFEPGVFVNLIVLPSGTKLFKRVRFSKRRFDEQQAEEWWNQNKDRVLRRYNPLSSSSSTNPTTTASSSTPTSPSTNPATIASSSTPTSSSTNPATAASSSTPASSSTNPATTASSSNPTPPPAEENGEASSPGT 1425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach2g00790 1425 Coils Coil 1090 1117 - -
Bach2g00790 1425 ProSiteProfiles BRX domain profile. 1287 1342 IPR013591 -
Bach2g00790 1425 SUPERFAMILY NAD(P)-linked oxidoreductase 58 361 IPR036812 -
Bach2g00790 1425 SMART fyve_4 885 954 IPR000306 GO:0046872
Bach2g00790 1425 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 731 782 IPR000408 -
Bach2g00790 1425 PANTHER REGULATOR OF CHROMOSOME CONDENSATION 370 1153 - -
Bach2g00790 1425 MobiDBLite consensus disorder prediction 412 433 - -
Bach2g00790 1425 SUPERFAMILY FYVE/PHD zinc finger 887 955 IPR011011 -
Bach2g00790 1425 CDD AKR_Tas-like 70 359 - -
Bach2g00790 1425 SUPERFAMILY RCC1/BLIP-II 503 888 IPR009091 -
Bach2g00790 1425 Pfam FYVE zinc finger 887 953 IPR000306 GO:0046872
Bach2g00790 1425 CDD FYVE_scVPS27p_like 895 949 - -
Bach2g00790 1425 Gene3D - 481 625 IPR009091 -
Bach2g00790 1425 Gene3D - 626 724 IPR009091 -
Bach2g00790 1425 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 562 613 IPR000408 -
Bach2g00790 1425 ProSiteProfiles PH domain profile. 375 408 IPR001849 -
Bach2g00790 1425 MobiDBLite consensus disorder prediction 1241 1281 - -
Bach2g00790 1425 MobiDBLite consensus disorder prediction 1052 1087 - -
Bach2g00790 1425 Pfam Transcription factor BRX N-terminal domain 1141 1173 IPR027988 -
Bach2g00790 1425 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 783 834 IPR000408 -
Bach2g00790 1425 Pfam Aldo/keto reductase family 72 361 IPR023210 -
Bach2g00790 1425 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 509 561 IPR000408 -
Bach2g00790 1425 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 835 886 IPR000408 -
Bach2g00790 1425 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 900 959 IPR013083 -
Bach2g00790 1425 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 707 717 IPR000408 -
Bach2g00790 1425 ProSiteProfiles Zinc finger FYVE/FYVE-related type profile. 891 953 IPR017455 -
Bach2g00790 1425 Pfam Transcription factor regulating root and shoot growth via Pin3 1287 1341 IPR013591 -
Bach2g00790 1425 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 669 720 IPR000408 -
Bach2g00790 1425 Gene3D - 725 899 IPR009091 -
Bach2g00790 1425 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 548 558 IPR000408 -
Bach2g00790 1425 MobiDBLite consensus disorder prediction 1188 1283 - -
Bach2g00790 1425 PRINTS Chromosome condensation regulator RCC1 signature 830 851 IPR000408 -
Bach2g00790 1425 PRINTS Chromosome condensation regulator RCC1 signature 564 580 IPR000408 -
Bach2g00790 1425 PRINTS Chromosome condensation regulator RCC1 signature 614 630 IPR000408 -
Bach2g00790 1425 PRINTS Chromosome condensation regulator RCC1 signature 772 790 IPR000408 -
Bach2g00790 1425 PRINTS Chromosome condensation regulator RCC1 signature 655 671 IPR000408 -
Bach2g00790 1425 PRINTS Chromosome condensation regulator RCC1 signature 671 685 IPR000408 -
Bach2g00790 1425 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 614 668 IPR000408 -
Bach2g00790 1425 Gene3D - 58 367 IPR036812 -
Bach2g00790 1425 MobiDBLite consensus disorder prediction 1197 1228 - -
Bach2g00790 1425 MobiDBLite consensus disorder prediction 1342 1425 - -
Bach2g00790 1425 SUPERFAMILY PH domain-like 358 406 - -
Bach2g00790 1425 Pfam Regulator of chromosome condensation (RCC1) repeat 668 717 IPR000408 -
Bach2g00790 1425 Pfam Regulator of chromosome condensation (RCC1) repeat 782 831 IPR000408 -
Bach2g00790 1425 Pfam Regulator of chromosome condensation (RCC1) repeat 562 610 IPR000408 -
Bach2g00790 1425 Pfam Regulator of chromosome condensation (RCC1) repeat 733 779 IPR000408 -
Bach2g00790 1425 Pfam Regulator of chromosome condensation (RCC1) repeat 613 664 IPR000408 -
Bach2g00790 1425 Pfam Regulator of chromosome condensation (RCC1) repeat 837 883 IPR000408 -
Bach2g00790 1425 FunFam PH, RCC1 and FYVE domains-containing protein 1 474 722 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach2g00790 Bach-Chr2 16814626 16828778 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach2g00790 1284 1342 Major Intrinsic Protein MIP AT1G31880 42.373 3.99e-11 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach2g00790 - - qsa:O6P43_021414 1403.65