Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach2g00789 ATGGGGCAACAGCAATCAAAGGGCAAGCTTGTTTATCAGCAGGTCAGTTATGGGAACGCCGAAGTAATCAAAGTCCTTCGTAGGGAAGGCGCAAGCCTTGAGTGGATTGATAGAGAAGGAAAGACACCCTTGATTGTTGCTTGCATGAATCCAGAGCTTTATGATGTTGCCAAAACTCTGATAGAACTTGGTGCTGACATTAATGCATATCGTCCAGGAATGGGTTGTCACGCGGGAACTCCGTTGCATCATGCAGCCAAAAGAGGTCTTGAAAGTATTGTTAAGTTACTTCTTATGCATGGAGCAAACCCATTGGTATTGAATGACGATTGCCAAACTGCTCTTGATATTGCCAGGGCTCAAGGGCACACCAATGTTGTCCGTGCATTAGAGAGTCATCTTTGCTTGTTCTCTGGTTGGCTGCGGCAGTTCCATGGACCAGGATTCCTAGAATTAGTAGCTCCTCAGTTGGTATCTAGAAAAGTATGGGTGGTTGTTTTACCAGTTGGCTCCCTTTCTCTTGCCAGACCTTACAAGTTGGAACTTGCCATATATTCTAGTTTGCAGGATGCACAACCACGTCAAGTTATTGCTCTGTGGAAGGCCAATTTAGAAGAACCAAAGCTACATCAGTCTGATCCTTCGGTGTCTATTGTTGATATTTCTAGCAAAACACGCATTAAACTTGGACCTGCAAGTGACAATGAAAAGCAACATCTTATGTGGGTTTCTGACGCATGCAAAGGAATTCCGCTGGCAAGGCATCCAGCATTTTTGCAGAACAACCTTGCTACAGTTCCACCAACTGCAGAAGATCTAGCGATGGCTATGGCTATCAATGCATCAATTCAGTCTGCCTTGCAGGAGAGGCTGCCTCTTCCTGATGCGCATCCAAGCTTTGAGGGATGTTCTTCAAGCGGCCAAAGATATAGCAGTAACCACGGTTCACTGGGTCCATCAAAGCTGAATATGAATAGTAGCGAATCTGTTCATGAAGATGGCCTGGGTGGCAGTTCAAATCAGCATGTCCAGATTCATGACAATGTCCCTGCCCAAACTGCCAGCGGTTCATGCGTGATATGTCTAGATGCTCCAGCAGAGGGGGCGTGCATCCCCTGTGGCCATGTTGCTGGATGCATGCCTTGCTTGAATGAAGTCAAAGCAAAGAAATGGGCTTGCCCTGTCTGTCGAGCAAGCGTTGAACAGGTTATAAAGATTTATCGTGTTTGA 1230 0.4618 MGQQQSKGKLVYQQVSYGNAEVIKVLRREGASLEWIDREGKTPLIVACMNPELYDVAKTLIELGADINAYRPGMGCHAGTPLHHAAKRGLESIVKLLLMHGANPLVLNDDCQTALDIARAQGHTNVVRALESHLCLFSGWLRQFHGPGFLELVAPQLVSRKVWVVVLPVGSLSLARPYKLELAIYSSLQDAQPRQVIALWKANLEEPKLHQSDPSVSIVDISSKTRIKLGPASDNEKQHLMWVSDACKGIPLARHPAFLQNNLATVPPTAEDLAMAMAINASIQSALQERLPLPDAHPSFEGCSSSGQRYSSNHGSLGPSKLNMNSSESVHEDGLGGSSNQHVQIHDNVPAQTASGSCVICLDAPAEGACIPCGHVAGCMPCLNEVKAKKWACPVCRASVEQVIKIYRV 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach2g00789 409 Pfam Ankyrin repeats (many copies) 79 118 IPR002110 GO:0005515
Bach2g00789 409 CDD RING-HC_XBAT35-like 354 407 - -
Bach2g00789 409 ProSiteProfiles Ankyrin repeat region circular profile. 77 103 - -
Bach2g00789 409 MobiDBLite consensus disorder prediction 297 339 - -
Bach2g00789 409 SUPERFAMILY Ankyrin repeat 13 135 IPR036770 -
Bach2g00789 409 SUPERFAMILY RING/U-box 357 403 - -
Bach2g00789 409 ProSiteProfiles Zinc finger RING-type profile. 358 397 IPR001841 -
Bach2g00789 409 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 336 408 IPR013083 -
Bach2g00789 409 ProSiteProfiles Ankyrin repeat profile. 77 109 IPR002110 GO:0005515
Bach2g00789 409 ProSiteProfiles Ankyrin repeat region circular profile. 39 69 - -
Bach2g00789 409 SMART ANK_2a 39 69 IPR002110 GO:0005515
Bach2g00789 409 SMART ANK_2a 77 106 IPR002110 GO:0005515
Bach2g00789 409 SMART ANK_2a 110 139 IPR002110 GO:0005515
Bach2g00789 409 Gene3D - 6 148 IPR036770 -
Bach2g00789 409 ProSiteProfiles Ankyrin repeat profile. 39 72 IPR002110 GO:0005515
Bach2g00789 409 PANTHER ROLLING PEBBLES, ISOFORM B 18 239 - -
Bach2g00789 409 Pfam Ankyrin repeats (3 copies) 15 69 IPR002110 GO:0005515
Bach2g00789 409 Pfam Zinc finger, C3HC4 type (RING finger) 356 403 - -
Bach2g00789 409 SMART ring_2 358 396 IPR001841 -
Bach2g00789 409 MobiDBLite consensus disorder prediction 301 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach2g00789 Bach-Chr2 16796868 16799804 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach2g00789 352 406 C3H Transcription Factor Family AT3G06140 33.929 5.78e-07 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach2g00789 - - gmx:100789309 558.14