LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bach2g00669	ATGTCCTGTGTCTCTACCTCATCCTCTTCCCTCAACCTGAGCAAACCTAACGACCCAGAAGCCATTTTCAAGCTCTCTCTTAAGGTCTGTGTCACTGAACTCTCCAATCTCTCATCTTTCTTCAAAACCTTGGTTTCAACCTCCAACGGGTCTGCTTTGGCAGATTGCAAGGATCAGATAGATGAAGCATTGAGTCGACTCAATGACTCGTTGTCGGCAATGGAGGCGGGTGAGAAAGCGTTGACGGATTCGAAGATCAACGACATCCAGACATGGATCAAAGCTGCCATGACAGACCAGGAGAGTTGCCTGGATGGATTGGAGGAAATGGAGTCAAATGCTATGGGCGAGGTGAAGAACAAGATGAAGAATTGCAGGGAGTGCACCAGTAACAGCCACGAGGGCAGATGA	411	0.4866	MSCVSTSSSSLNLSKPNDPEAIFKLSLKVCVTELSNLSSFFKTLVSTSNGSALADCKDQIDEALSRLNDSLSAMEAGEKALTDSKINDIQTWIKAAMTDQESCLDGLEEMESNAMGEVKNKMKNCRECTSNSHEGR	136

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bach2g00669	136	SUPERFAMILY	Plant invertase/pectin methylesterase inhibitor	3	132	IPR035513	-
	Bach2g00669	136	Gene3D	Invertase/pectin methylesterase inhibitor family protein	1	134	IPR035513	-
	Bach2g00669	136	PANTHER	PECTINESTERASE INHIBITOR-LIKE	3	131	-	-
	Bach2g00669	136	NCBIfam	pectinesterase inhibitor domain	3	131	IPR006501	GO:0004857
	Bach2g00669	136	CDD	PMEI-like_3	15	132	-	-
	Bach2g00669	136	SMART	PMEI_2	4	135	IPR006501	GO:0004857
	Bach2g00669	136	Pfam	Plant invertase/pectin methylesterase inhibitor	3	132	IPR006501	GO:0004857

Showing 1 to 7 of 7 entries

Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Bach2g00669	Bach-Chr2	14907656	14908066	Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bach2g00669	2	132	Carbohydrate Esterase	AT1G53840	41.379	2.29e-22	89.7

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bach2g00669	-		-	pcin:129300317	161.77

Showing 1 to 1 of 1 entries