Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach2g00627 ATGGCGTTTGAGTCTAAGAAATCATGGGTCTGTTTCTACTCTCTCGTACTTGCAATATTCTTCGTTGACGCCTTGGCTGGAGCTCAGATCTCTGAAACCAGGAATGTGAAGGCACAGCTATTGCAGAGGTTAAGCAACTCATCAATGGAAGCCAGGGCAAAAAAAGCTGAAAAATTAAACGAGCAAGCAGTGGCAGACCCTGAGGAAATTGTTTCCATGGTTGAAATGAGCATTAGGAACAGCACAGAAGGGAGGAGAAAGTTGGGATTTTTCTCCTGTGGAACAGGTAACCCAATTGATGACTGCTGGCGTTGTGACCCCAACTGGCAAAAGAACAGGAAGCGTCTTGCCGATTGTGGCATTGGATTTGGTAGAAACGCCATTGGTGGCCGTGATGGTAGATTCTATGTTGTGACTGATTCAAGAGACGATGACCCAGTTAACCCCAAGCCCGGCACTCTTCGTCATGCTGTAATCCAAGATAGGCCTCTCTGGATTGTGTTCAAGCGTGACATGGTTATCCAATTGAAGCAAGAGCTCATTGTGAACAGCTTCAAGACCATTGATGGGCGAGGAGCCAATGTGCACATTGCCAATGGAGGGTGTATCACTATCCAATATGTTACCAATGTTATCATTCATGGTCTCCACATCCATGACTGCAAACCCACGGGCAATGCTATGGTGAGGAGCTCACCCACACACTATGGATGGAGGACAATGGCTGACGGCGACGCCATTTCCATATTTGGCTCAAGTCACATCTGGGTCGACCATAATTCTTTGTCCCACTGCGCTGATGGCCTTGTGGATGCTGTCATGGGTTCAACTGCAATTACAATTTCCAACAACCATTTCACCCACCACAATGAGGTGATTCTACTGGGCCACAGTGATTCTTACATAAGAGACAAGCAAATGCAAGTGACCATTGCATACAATCATTTTGGAGAGGGACTTATCCAGAGAATGCCAAGGTGTAGGCATGGATATTTCCATGTTGTGAATAATGACTACACTCACTGGGAGATGTATGCAATTGGTGGAAGTGCAAGCCCCACCATTAACAGCCAGGGCAATAGATACAATGCTCCAGCTAACCCATTTGCCAAGGAGGTGACTAAAAGAGTAGAGACAGCTACAAGTGAGTGGAAGGGTTGGAATTGGAGATCAGAGGGAGATCTGTTACTGAATGGTGCCTATTTCACCCCATCTGGTGCTGGAGCTTCAGCCAACTATGCCAGGGCATCAAGCTTAGGAGCTAAGTCTTCTTCTATGGTTGGTAGCATGACTTCAGCTTCTGGTGTACTCGGATGCCGCAGAGGCCATCAGTGCTAG 1338 0.4709 MAFESKKSWVCFYSLVLAIFFVDALAGAQISETRNVKAQLLQRLSNSSMEARAKKAEKLNEQAVADPEEIVSMVEMSIRNSTEGRRKLGFFSCGTGNPIDDCWRCDPNWQKNRKRLADCGIGFGRNAIGGRDGRFYVVTDSRDDDPVNPKPGTLRHAVIQDRPLWIVFKRDMVIQLKQELIVNSFKTIDGRGANVHIANGGCITIQYVTNVIIHGLHIHDCKPTGNAMVRSSPTHYGWRTMADGDAISIFGSSHIWVDHNSLSHCADGLVDAVMGSTAITISNNHFTHHNEVILLGHSDSYIRDKQMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSASPTINSQGNRYNAPANPFAKEVTKRVETATSEWKGWNWRSEGDLLLNGAYFTPSGAGASANYARASSLGAKSSSMVGSMTSASGVLGCRRGHQC 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach2g00627 445 Coils Coil 41 66 - -
Bach2g00627 445 PANTHER PECTATE LYASE 18-RELATED 59 443 IPR045032 GO:0030570
Bach2g00627 445 SMART amb_all 171 368 IPR002022 -
Bach2g00627 445 Pfam Pectate lyase 177 360 IPR002022 -
Bach2g00627 445 FunFam Pectate lyase 96 438 - -
Bach2g00627 445 PRINTS Pollen allergen Amb family signature 345 364 IPR018082 -
Bach2g00627 445 PRINTS Pollen allergen Amb family signature 416 439 IPR018082 -
Bach2g00627 445 PRINTS Pollen allergen Amb family signature 179 195 IPR018082 -
Bach2g00627 445 PRINTS Pollen allergen Amb family signature 323 342 IPR018082 -
Bach2g00627 445 PRINTS Pollen allergen Amb family signature 143 168 IPR018082 -
Bach2g00627 445 PRINTS Pollen allergen Amb family signature 119 136 IPR018082 -
Bach2g00627 445 PRINTS Pollen allergen Amb family signature 243 264 IPR018082 -
Bach2g00627 445 PRINTS Pollen allergen Amb family signature 387 411 IPR018082 -
Bach2g00627 445 Gene3D - 96 438 IPR012334 -
Bach2g00627 445 SUPERFAMILY Pectin lyase-like 84 418 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach2g00627 Bach-Chr2 13977452 13981351 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach2g00627 28 445 Polysaccharide Lyase AT4G13710 78.538 0.0 708
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach2g00627 K01728 - qsa:O6P43_003054 805.438