Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach2g00609 ATGGAGGATATGGAAATTGATCAAATTGTAGATGTTCCTGATTCTCCTGATAGATTAACTGCCAGGCATATCATTGGTCAGAAATATGTTGGTAATCCTGGTGTTGTGGATGAAAAGACTGAGAAGAGAGAGCAGGGTTGTCTTGTTGCTGAAAATGGTAAGAATAGAAGACTGGCTATTTGTCCTGTGAACAATTCTAACAATGACAAAGTGAAGAACAGCAGCGACTATATACAAGTATCCTCATCAAAGAAATCTCATGCTTCTGAAAATGGCTTCTTATTTAGGATAGCACCAGCTGGAAAAATATTTCTTCATGGGAGAACACACTCCAATGGAGCTGAAAAGGAGAGAGGGGAAGCTATTTATACTAAATTCCCTTCTAAATCATCTTCCCATGATGATATTCCAGTTGTGGATTTGACTAAGAATGGACTGCCTCAAAGACTCAAGGCAGGTTTGTCTCATCATGAATCTAAAGATCTTGACACCAAAGACAAGACAGAATGGAATACAAGCACTGGGAGCTCTTCTCTACCATCTGTTTCTGATCCTTTTAATACATCTGGCAATTCCTACCAAGGAAAATGTGAAATGGAAGGTAACTCACGGCCTGATCTTATTGCCACTAATCATGGAAAGAGCATTCATCTGTCAGGTGATTCTCAACAGAAAACAGAAAATCAATTGTCTTTACGTTCTTGTGTTTCAACCACTTCAAGAGTCAATGGGCAAAGGAGATTGGTACAAAATGACTGTATTTCACCACATGATATTGCAACATGGGCTAAGCAATTGAATGAACAGAACAGTAACAAAATCAATGATAATGAACAAAGCCATGCTGGGCATGTCAATGGGAAAAAGAGATTGGTACGAAATGGTTGTATTTCACCACAGAATATTGCAACAAGGGCTAAACAATGGACTGGACCAAACAGTAACAAAATCAATGATAATGAACAAAGCCATGCTGGCCATGCAGTCTCTAGCAATCGAATGTCTCCGATCAGTATTGATGATATAATGGCTGAAGAGAAAGGCAGCAGTAGAACAAAGGGAAAAGAAGTGTTAGTTCATCTCCCATCAAGTGCACATGATGCTGTAACTATTGATGGAGTCAGAGCTAGAAGCAGCACTGCTTGGCCTATATATGAGGTAACTGGGCATCATTCAAGTAGAAACAGTGATTTTAGAAGCCTGATCAGAAACCATAATAGTGCCAAATGTGAGAACAAACTGAACACAAGACATGCTGGGAGCAGCCATATCAGCAAAATAGTACATGGTTCCTTAGGAGATCGTGCAGCGCAAGCAACTTCTGTTGTCATTTCAGAGTCTAACTCATTGAACGGACCTCGTCCTATGGTTGGCACACTGACCAAAAGACAAAGGAAACGTGGATCATCTTCAAGAAATCCCAATGAAGTATCTGACAACTCAGAAATTATGTTTCTTGGTTCATCTGGGGAATCATCAAATTCAGGCACATCCAAAGGCCCTACCTTGGATCCTGACATGGTTGAGGTGTTATCTGAAACAAAATATACAGATAGAATTCCTCAAGGTTATGTCATGAACAATGATGAATCTGATGCTCGCGCAAGACAATTAGAAGCAGATGAGATATTGGCCCGTGAACTTCAAGAACAACTATATCATGAAGATTCTTTTGGGGGTGGAGAGATTGATGAACATTTAGCACGTGAACTGCAGCTTGATGAGGAGGTTTTCCCTGCTTTTCTTCCTAATGGCCATAGATCACATTCTAGATGGATTGAAATGTTGCCTTCAAATAATCTACCTCAATTACTGGCTCGTCAAAATTCTTTAAATAGGAGGAGAGCTGGGACTCAAGTTCCTCGCACTAGTAGAATATCACAGTTGAGAAGTGGTCTAAGTCAGGCTTCTACGCATGCTATGTCATCTAGAGGAAGAAATCTCCGCTTTCCTTTCAATATGGACTTGGACACGAGACTTAATATATTAGAAGCACTAGAGGATCTTAGTGATATGGGAATCGCTGATGACATCTTTCAAGCTCAACGTGATTTCAATGAAAATGATTATGAGATGTTATTAGCACTTGATGAGAACAATCACCAACATGCTGGTGCATCTTCCAATCAAATCATCAGTTTACCACAGTCTACTATACAGACTGACATCTGCGATGAGGCATGTGCAATATGTCTTGAGACCCCAGTTAGGGGAGAAACCATTAGGCATCTTCCTTGTTTGCACAAATTTCACAAAGATTGTATCGATCCTTGGCTGCGAAGGAAAACATCTTGCCCTGTGTGCAAGTCATCTATCACCTGATTCAATCTGGAACTGCAGTGGTTGATTCATCCTGCTGCAGTGGAGTTTCTCAGTAATCTCTTTTTGTTCAAGGTAACTTGAAGCATACCGTGAGAGGATGCTACTATAACAAAAATGCATTTTTGCAGTTTACCCCGTTCACTTTTGATACGTTATCACAAGAATACAAGAGCCTGGAAAATTTCCATGTTGGTGTTACTTATAGGGCTGGAAAATTCTTTATTCTCTCGAATTATAACAAATTTT 2568 0.3991 MEDMEIDQIVDVPDSPDRLTARHIIGQKYVGNPGVVDEKTEKREQGCLVAENGKNRRLAICPVNNSNNDKVKNSSDYIQVSSSKKSHASENGFLFRIAPAGKIFLHGRTHSNGAEKERGEAIYTKFPSKSSSHDDIPVVDLTKNGLPQRLKAGLSHHESKDLDTKDKTEWNTSTGSSSLPSVSDPFNTSGNSYQGKCEMEGNSRPDLIATNHGKSIHLSGDSQQKTENQLSLRSCVSTTSRVNGQRRLVQNDCISPHDIATWAKQLNEQNSNKINDNEQSHAGHVNGKKRLVRNGCISPQNIATRAKQWTGPNSNKINDNEQSHAGHAVSSNRMSPISIDDIMAEEKGSSRTKGKEVLVHLPSSAHDAVTIDGVRARSSTAWPIYEVTGHHSSRNSDFRSLIRNHNSAKCENKLNTRHAGSSHISKIVHGSLGDRAAQATSVVISESNSLNGPRPMVGTLTKRQRKRGSSSRNPNEVSDNSEIMFLGSSGESSNSGTSKGPTLDPDMVEVLSETKYTDRIPQGYVMNNDESDARARQLEADEILARELQEQLYHEDSFGGGEIDEHLARELQLDEEVFPAFLPNGHRSHSRWIEMLPSNNLPQLLARQNSLNRRRAGTQVPRTSRISQLRSGLSQASTHAMSSRGRNLRFPFNMDLDTRLNILEALEDLSDMGIADDIFQAQRDFNENDYEMLLALDENNHQHAGASSNQIISLPQSTIQTDICDEACAICLETPVRGETIRHLPCLHKFHKDCIDPWLRRKTSCPVCKSSIT 773
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach2g00609 773 CDD RING-H2_PA-TM-RING 728 769 - -
Bach2g00609 773 Pfam Ring finger domain 727 769 IPR001841 -
Bach2g00609 773 SUPERFAMILY RING/U-box 723 772 - -
Bach2g00609 773 MobiDBLite consensus disorder prediction 613 640 - -
Bach2g00609 773 MobiDBLite consensus disorder prediction 153 193 - -
Bach2g00609 773 FunFam RING/U-box superfamily protein 693 773 - -
Bach2g00609 773 MobiDBLite consensus disorder prediction 169 193 - -
Bach2g00609 773 MobiDBLite consensus disorder prediction 471 501 - -
Bach2g00609 773 SMART ring_2 728 768 IPR001841 -
Bach2g00609 773 MobiDBLite consensus disorder prediction 447 503 - -
Bach2g00609 773 MobiDBLite consensus disorder prediction 309 337 - -
Bach2g00609 773 MobiDBLite consensus disorder prediction 153 168 - -
Bach2g00609 773 PANTHER SI:CH211-59O9.10 375 773 - -
Bach2g00609 773 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 694 773 IPR013083 -
Bach2g00609 773 ProSiteProfiles Zinc finger RING-type profile. 728 769 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach2g00609 Bach-Chr2 13454339 13460636 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach2g00609 683 769 C3H Transcription Factor Family AT3G55530 36.134 6.63e-17 80.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach2g00609 - - aprc:113872307 593.578