Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach2g00556 ATGGATATATCCATATATCTTTGGCTTTTGAGATACAAAAATATGGCAAAACCTATACGAAAAGTTAGTTCACTTGGTTCACGTAGAATTGGACGTATTAGTTCACGTAAGAATGTGCGTAAAATACCAATGGGGGTTATTCATGTTCAAGCTAGTTTCAACAATATCATTGTGACTATTACAGATGTACGGGGTCAAGTGATTTCTTGGTCTTCCACTAGTACCTGTGGATTCAAAGGTCCAAGAAAGGGGACACCTTTTGCCGCTCAAACCGCATCAGGAGATGCAATTCGACCAGTAGCATATCAAGGTATGCAATGGGCAGAAGTCATGATAAAAGGCCCCGGTCTCGGAAGAGATGCAGCATTAAGGGCTATTCATAGAAGTGGTATACTATTCAATTTCATACGGGATGTAACCCCTATGCCATATAATGGATGTAGGCCCCCTAAAAACAGAAGTGTGTAA 468 0.406 MDISIYLWLLRYKNMAKPIRKVSSLGSRRIGRISSRKNVRKIPMGVIHVQASFNNIIVTITDVRGQVISWSSTSTCGFKGPRKGTPFAAQTASGDAIRPVAYQGMQWAEVMIKGPGLGRDAALRAIHRSGILFNFIRDVTPMPYNGCRPPKNRSV 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach2g00556 155 Hamap 30S ribosomal protein S11 [rpsK]. 20 155 IPR001971 GO:0003735|GO:0005840|GO:0006412
Bach2g00556 155 Gene3D Ribosomal protein S11 28 154 IPR036967 GO:0003735|GO:0005840|GO:0006412
Bach2g00556 155 PANTHER 40S RIBOSOMAL PROTEIN S14/30S RIBOSOMAL PROTEIN S11 41 153 IPR001971 GO:0003735|GO:0005840|GO:0006412
Bach2g00556 155 SUPERFAMILY Translational machinery components 40 153 - -
Bach2g00556 155 Pfam Ribosomal protein S11 45 153 IPR001971 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach2g00556 Bach-Chr2 11962851 11963318 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach2g00556 44 145 Cytoplasmic Ribosomal Protein Gene Family AT3G52580 34.234 3.51e-12 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach2g00556 K02948 - qsa:O6P43_036012 218.779