Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach2g00544 ATGAGATTCGACCCGTTTCCAAATCGACCCACCAAAACCCTCAATAAACCTCCGATAAAGCGACAGCGCCTAGTTAAACAATCCCGCGCCTGCTCTTCTTCTCCGCTCTTCACGCTGTTTGTTTTGACTTCTGATACAACTCGCTCTTTCGCTTCCACTTATTGGATAATGGGGTCAACAAATATCAGAGACATCTTGACAGCGTTTAGTCCTTCTTTGGACTTTTTTGCTATCAGCACTGGAGACGGTCGTGTAAAGATATGGGATACACTGAAGGGTCAAGTCCAGACTGAGTTTGCAGACATTACATCCACTGATGCAACAAGTATATATGATAGACCCTTAAAGGGGCATCTTTCAATGGATTATACATGCATGAGGTGGTTGTCTTTGGAAAGAAAGAAAAAAAGGAAGCATAGGTCCTCGTTGTTGGTACTTGGGACAGGTGGTGGTGATGTTTTAGCTCTTGATGTGGCTGCTGGTCAGTTAAATTGGAGATTTAGTGACTGCCATCCAGGGGGCGTCAGAGCCATTTCTTCTTCTACAAATGGATCTTGCATTTATACTGCAGGTGCAGATGGGATGATATGCGGGATTGATTCAATGTCTGGAAATCTTTTGGAGAAATTTAAAGCTTCTACCAAAGCAATATCCAGTATATCTGTTTCTTCAGATGGGAAGACGTTAGCTACTGCATCAGCACAATTGAAGATTTTTAACTGTTCTGACAACAAGAAGATACAAAAGTTCTCAGGTCATCCTGGATCAGTTCGCTGTATGGTCTTCACTGAAGATGGGAAGTATATCCTTTCATCTGGTGTTGGTGAAAGATATGTTGCATTATGGAGGATAGATGGAGCCAAAAAGCAGTCAGCGAGTTGTGTTCTCTCTATGGAGCACCCTGCTGTGTTTCTTGATAGCAGATGTGTTAACAGTGGGGGTCTTGATGAGGCTGGTTTATGTGTTTTGGCTATCTCAGAAGTTGGTGTTTGTTATTTTTGGTTTGGAAATAATATTGAGGAACTACGTAATGCAAAACCCACAAAAATAACATTATCCCAGGAAGATGTATCCTCCAGAAATTTCAAAGGGGCACTGCCAGCAATATATGCTGCAAAATTACAAGGCACTGAAAAGCCTGCAACTGGAAAAGTTTTTCTTGTTTATGGGTTGCTTGTAAAACCATCATTTCAACAAATTCTAGTTCATTCTGGCACAGACTTAAAGTTGAGTGTCTCCCAAGATGGTATTCTTCTTCCAATGAGTCAGTCTCTTATCAAGTCTAAGAAGGGGGTTAATGCAAAAAAGTTTACTGCACTAGACCGTGCCAATGCAGAGGATGCCCTACTCCCAAATCCTACGGTTTTTGATTCTCTGGAGAAACAGGAAGGATTTCAAAACTCTTTGGATGCAGTAGAGATAGGTGATGATTCTGTAAGAAGTCGCAAAGCTGAGTCTATTGAGGGTGAAGAGATGGTCCTAGATGAAACTGATGTAATATGCATTGAGGACCGGCTGAGATCAGTGGGAATACTTAACAGTGAAAGTGATATTGCATCAAATGTCAAACTCCATTCTACATTGTTGAAGGGTATTGATCTTGATGCTACTGTTCCAATGAAAAAGATAAGAGCAACTGTTTTGTCCATGGTGCCTAGTGAAGCATACAAGCTACTGGAAGTTTTGGTGGCTGCATGGCAGTCAAGGTCATGTAGTGGAAAGAATGTTCTTCCGTGGATACATCGCATATTAGTGAGTCATGGTCACTATGTCATGTGTCAGGAATCTGTCACACACATGTTTGATTGCTTATCCAAGATTTGCAATTCCAGAGGACTTGCTCTTCAACCATTATTACACTTGTCGGGCCGGCTACAGCTGGTGACAACACAGATTAACAAGGCTTCTCAGAATATAAGTCATTCAGTGACAGTGAGTGATCACCAAATGGAAGAAAGTGAAGATGAGGATGAATATTTTCACGAGGAAGGAGATGATGCATCTGGAATAAGTAGTGATGATGATGAAAGCTAGTTTGACTTCAAATGAGAGCTGACAAAGATTTTGCGGGCATAAACCAGATGCAGGATTTGAAAGCGATTGGTCCTTTTGTTGACTAAATTTGGGTGTTGTAATATTGGAATCTTTAAGTTTGATCATTCCATGGATTGTCTCAAAGGTGCAACTCACTGTCAAAATTTTGTTTCCATCTTGGTGGTTCCATTCTAATGGAGGAAATTTTGTTATCCACGTGGGTTGAAAATGTTACAATCCATCAATTATATAATTTTATTGTATTAACAGAGGTGCAAGTTCT 2317 0.4074 MRFDPFPNRPTKTLNKPPIKRQRLVKQSRACSSSPLFTLFVLTSDTTRSFASTYWIMGSTNIRDILTAFSPSLDFFAISTGDGRVKIWDTLKGQVQTEFADITSTDATSIYDRPLKGHLSMDYTCMRWLSLERKKKRKHRSSLLVLGTGGGDVLALDVAAGQLNWRFSDCHPGGVRAISSSTNGSCIYTAGADGMICGIDSMSGNLLEKFKASTKAISSISVSSDGKTLATASAQLKIFNCSDNKKIQKFSGHPGSVRCMVFTEDGKYILSSGVGERYVALWRIDGAKKQSASCVLSMEHPAVFLDSRCVNSGGLDEAGLCVLAISEVGVCYFWFGNNIEELRNAKPTKITLSQEDVSSRNFKGALPAIYAAKLQGTEKPATGKVFLVYGLLVKPSFQQILVHSGTDLKLSVSQDGILLPMSQSLIKSKKGVNAKKFTALDRANAEDALLPNPTVFDSLEKQEGFQNSLDAVEIGDDSVRSRKAESIEGEEMVLDETDVICIEDRLRSVGILNSESDIASNVKLHSTLLKGIDLDATVPMKKIRATVLSMVPSEAYKLLEVLVAAWQSRSCSGKNVLPWIHRILVSHGHYVMCQESVTHMFDCLSKICNSRGLALQPLLHLSGRLQLVTTQINKASQNISHSVTVSDHQMEESEDEDEYFHEEGDDASGISSDDDES 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach2g00544 677 ProSiteProfiles Trp-Asp (WD) repeats profile. 250 292 IPR001680 GO:0005515
Bach2g00544 677 Pfam WD domain, G-beta repeat 245 282 IPR001680 GO:0005515
Bach2g00544 677 Pfam WD domain, G-beta repeat 64 89 IPR001680 GO:0005515
Bach2g00544 677 MobiDBLite consensus disorder prediction 639 677 - -
Bach2g00544 677 Pfam Dip2/Utp12 Family 537 629 IPR007148 -
Bach2g00544 677 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 67 316 IPR011047 -
Bach2g00544 677 Gene3D - 61 373 IPR015943 GO:0005515
Bach2g00544 677 SMART WD40_4 203 240 IPR001680 GO:0005515
Bach2g00544 677 SMART WD40_4 49 89 IPR001680 GO:0005515
Bach2g00544 677 SMART WD40_4 243 283 IPR001680 GO:0005515
Bach2g00544 677 SMART WD40_4 160 200 IPR001680 GO:0005515
Bach2g00544 677 ProSiteProfiles Trp-Asp (WD) repeats profile. 68 98 IPR001680 GO:0005515
Bach2g00544 677 PANTHER OS03G0300300 PROTEIN 59 676 - -
Bach2g00544 677 MobiDBLite consensus disorder prediction 650 677 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach2g00544 171 284 U-box Gene Family AT2G33340 27.966 1.79e-07 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach2g00544 K14546 - gmx:100784148 815.453