Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach2g00534 ATGGGAACTATTCGAGCAGATGAAATTAGTAAAATTATCCGTGAACGTATTGAGCAATATAATCCAGAAGTAAAGATTGTAAATACTGGTACTGTACTTCAAGTAGGCGACGACATTGCTCGTATTTATGGTCTTGTTGAGGTAATGGCAGGTGAGTTAGTAGAATTTGAAGAGGGTACGGTAGGTATTGCTTTGAATTTGGAATCAAATAATGTTGGTGTTGTATTAATGGGTGACGGTTTGCTGATACAAGAGGGAAGTTCTGTAAAAGCAACAGGAAGAATTGCTCAGATACCAGTAAGTGAGGCTTATTTGGGTCGTGTTATAAATGCCCTAGCTAAACCCATTGACGGTCGAGGAGAAATTTCAACTTCTGAATCTCGGTTAATCGAATCTCCCGCTCCCGGTATTATTTCGAGACGTTCCGTATATGAGCCTCTTCAAACAGGACTTATTGCTATTGGTGCGATGATCCCTATAGGTCGTGGTCAGCGAGAATTAATTATTGGGGACAGACAAACGGGTAAAACAGCGGTAGCTACAGATACGATTCTCAATCAACAAGGTCAAAATGTAATATGTGTTTATGTAGCTATTGGTCAAAAAGCATCTTCTGTGGCTCAGGTGGTGGTTACTTTACAAGAAAAAGGAGCAATGGAATACACTATTGTAGTAGCTGAAACAGCGGATTCTCCAGCTACATTACAATACCTCGCTCCTTATACAGGAGCAGCTCTGGCTGAATATTTTATGTACCGTGAACGACACACTTTAATCATTTATGACGATCCCTCCAAACAAGCACAGGCTTATCACCAAATGTCTCTTCTATTACGAAGACCACCGGGCCGCGAAGCTTATCCGGGAGATGTTTTTTATTTGCATTCACGCCTTTTGGAAAGAGCCGCTAAATTAAGTTCTCAGTTAGGTGAAGGAAGTATGACTGCTTTACCAATAGTTGAGACCCAATCGGGAGATGTTTCAGCTTATATTCCTACTAATGTAATTTCCATTACGGATGGCCAAATATTCTTATCCGCCGATCTATTCAATGCTGGAATTAGACCTGCTATTAATGTGGGTATTTCTGTCTCTAGAGTTGGATCTGCGGCTCAAATTAAAGCCATGAAATAA 1134 0.4056 MGTIRADEISKIIRERIEQYNPEVKIVNTGTVLQVGDDIARIYGLVEVMAGELVEFEEGTVGIALNLESNNVGVVLMGDGLLIQEGSSVKATGRIAQIPVSEAYLGRVINALAKPIDGRGEISTSESRLIESPAPGIISRRSVYEPLQTGLIAIGAMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIGQKASSVAQVVVTLQEKGAMEYTIVVAETADSPATLQYLAPYTGAALAEYFMYRERHTLIIYDDPSKQAQAYHQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSSQLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMK 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach2g00534 377 FunFam ATP synthase subunit alpha 95 372 - -
Bach2g00534 377 CDD F1-ATPase_alpha_CD 95 368 IPR033732 GO:0032559
Bach2g00534 377 Gene3D - 3 94 IPR023366 -
Bach2g00534 377 Hamap ATP synthase subunit alpha [atpA]. 2 377 IPR005294 GO:0015986|GO:0045261|GO:0046933
Bach2g00534 377 Pfam ATP synthase alpha/beta family, beta-barrel domain 29 93 IPR004100 GO:0046034|GO:1902600
Bach2g00534 377 SUPERFAMILY N-terminal domain of alpha and beta subunits of F1 ATP synthase 11 95 IPR036121 GO:0046034|GO:1902600
Bach2g00534 377 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 97 371 IPR027417 -
Bach2g00534 377 PANTHER ATP SYNTHASE SUBUNIT ALPHA, MITOCHONDRIAL 3 377 IPR005294 GO:0015986|GO:0045261|GO:0046933
Bach2g00534 377 Pfam ATP synthase alpha/beta family, nucleotide-binding domain 150 365 IPR000194 GO:0005524
Bach2g00534 377 Gene3D - 95 372 IPR027417 -
Bach2g00534 377 FunFam ATP synthase subunit alpha 1 94 - -
Bach2g00534 377 ProSitePatterns ATP synthase alpha and beta subunits signature. 356 365 IPR020003 GO:0005524
Bach2g00534 377 NCBIfam F0F1 ATP synthase subunit alpha 4 377 IPR005294 GO:0015986|GO:0045261|GO:0046933
Bach2g00534 377 CDD ATP-synt_F1_alpha_N 28 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach2g00534 Bach-Chr2 10398662 10399795 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach2g00534 87 371 Primary Pumps ATPases(2) AT4G38510 29.470 7.53e-29 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach2g00534 K02111 - gmx:3989298 688.337