Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach2g00511 ATGGCGATACATTTATACAAAACTTCTACCCCGAGCACACGCAATGGAGCCGTAGACAGTCGAGTGAAATCCAATCCACGAAATAATTTGATCTATGGACAACATCGTTGTGGTAAAGGTCGTAATGCAAGAGGAATCATTACCGCAAGGCATAGAGGGGGAGGTCATAAGCGGCTATACCGTAAAATCGATTTTCGACGGAATCAAAAAGACATATATGGTAAAATCGTAACCATAGAATACGACCCTAATCGAAATGCATACATTTGTCTCATACACTATGGGGATGGTGAGAAAAGATATATTTTACATCCCAGAGGGGCTATAATTGGAGATACCATTGTTTCTGGTACAGAAGTTCCTATAAAAATGGGAAATGCCCTACCTTTGAAAAAATCTACTTCAACCGATATGCCCTTAGGCACGGCCATACATAACATAGAAATCACACTCGGAAAGGGTGGACAATTAGCTAGAGCAGCAGGCGCTGTAGCGAAACTGATTGCAAAAGAGGGGAAATCGGCCACATTAAAATTACCTTCTGGGGAGGTCCGTTTGATATCCAAAAACTGCTCAGCAACAGTCGGACAAGTGGGGAATGTTGGGGTAAACCAGAAAAGTTTGGGTAAAGCCGGATCGAAATGTTGGCTAGGTAAGCGTCCTGTAGTAAGAGGAGTAGTGATGAACGCTGTAGATCATCCCCATGGGGGTGGTGAAGGGAAGGCCCCAATTGGGAGAAAAAAACCTGCAACTCCTTGGGGTTATCCTGCACTTGGAAGAAGAAGTAGAAAAAGGAATAAATATAGTGATAATTTGATTGTTCGTCGCCGTAATAAGTAA 840 0.4286 MAIHLYKTSTPSTRNGAVDSRVKSNPRNNLIYGQHRCGKGRNARGIITARHRGGGHKRLYRKIDFRRNQKDIYGKIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLKKSTSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGVNQKSLGKAGSKCWLGKRPVVRGVVMNAVDHPHGGGEGKAPIGRKKPATPWGYPALGRRSRKRNKYSDNLIVRRRNK 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach2g00511 279 Hamap 50S ribosomal protein L2 [rplB]. 1 278 IPR005880 GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740
Bach2g00511 279 MobiDBLite consensus disorder prediction 232 279 - -
Bach2g00511 279 FunFam 50S ribosomal protein L2, chloroplastic 1 112 - -
Bach2g00511 279 SMART Ribosomal_L2_2 40 116 IPR002171 GO:0003735|GO:0005840|GO:0006412
Bach2g00511 279 FunFam 50S ribosomal protein L2 199 279 - -
Bach2g00511 279 NCBIfam 50S ribosomal protein L2 3 278 IPR005880 GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740
Bach2g00511 279 SUPERFAMILY Nucleic acid-binding proteins 2 123 IPR012340 -
Bach2g00511 279 Gene3D - 116 199 IPR014722 -
Bach2g00511 279 Gene3D Ribosomal protein L2, domain 3 200 278 IPR014726 -
Bach2g00511 279 PIRSF RPL2p_RPL2a_RPL8e_RPL2o 13 279 IPR002171 GO:0003735|GO:0005840|GO:0006412
Bach2g00511 279 SMART Ribosomal_L2_C_2 122 256 IPR022669 GO:0003735|GO:0005840|GO:0006412
Bach2g00511 279 FunFam 50S ribosomal protein L2, chloroplastic 116 199 - -
Bach2g00511 279 Gene3D - 1 112 IPR012340 -
Bach2g00511 279 ProSitePatterns Ribosomal protein L2 signature. 221 232 IPR022671 GO:0003735|GO:0005840|GO:0006412
Bach2g00511 279 PANTHER RIBOSOMAL PROTEIN L2 36 277 IPR002171 GO:0003735|GO:0005840|GO:0006412
Bach2g00511 279 MobiDBLite consensus disorder prediction 263 279 - -
Bach2g00511 279 Pfam Ribosomal Proteins L2, C-terminal domain 123 254 IPR022669 GO:0003735|GO:0005840|GO:0006412
Bach2g00511 279 SUPERFAMILY Translation proteins SH3-like domain 125 276 IPR008991 -
Bach2g00511 279 MobiDBLite consensus disorder prediction 1 25 - -
Bach2g00511 279 Pfam Ribosomal Proteins L2, RNA binding domain 40 116 IPR022666 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach2g00511 Bach-Chr2 10314631 10316128 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach2g00511 51 238 Cytoplasmic Ribosomal Protein Gene Family AT3G51190 34.804 6.99e-26 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach2g00511 K02886 - tcc:9978159 535.028