Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bach2g00460 | ATGAGAATAAATCCTACCACTTCCGGTCCTGAGGTTTCCGCACTTGAAAAAAAAAACCTGGGACGTATCGTTCAAATAATCGGTCCAGTACTGGATGTAGCTTTTCCCCCAGGGAAGATGCCTAATATTTACAACGCTCTGGTAGTTAAGGGTCGAGATACTGTCGGTCAACAAATTAACGTGACTTGTGAAGTACAGCAATTATTAGGAAATAATCGAGTTAGAGCTGTAGCTATGAGTGCTACAGATGGTCTAACGAGAGGAATGGAAGTGATTGACACGGGAGCTCCTTTAAGTGTTCCAGTGGGCGGAGCAACTCTAGGGCGAATTTTCAACGTGCTTGGAGAGCCTATTGATAATTTAGGTCCTGTAGATACTCGCACAACATCTCCTATTCATAGATCTGCGCCTGCCTTTATACAGTTAGATACAAAATTATCTATTTTTGAAACAGGAATTAAAGTAGTAGATCTTTTAGCTCCTTATCGACGTGGAGGAAAAATAGGACTTTTCGGTGGAGCTGGGGTAGGTAAAACAGTACTCATTATGGAATTAATCAACAACATTGCCAAAGCTCATGGAAGTGTGTCCGTATTTGGCAGAGTAGGTGAACGTACTCGTGAGGGAAATGATCTTTACAAGGAAATGAAAGAATCTGGAGTAATTAATGAACAAAATATTCCAGAATCAAAAGTGGCTCTAGTCTATGGTCAGATGAATGAACCGCCCGGAGCTCGTATGAGAGTTGGTTTAACTGCCCTAACTATGGCAGAATATTTCCGGGATGTTAATCAACAAGACGTGCTTCTATTTATCGACAATATTTTCCGCTTCGTCCAAGCAGGATCCGAAGTATCCGCCTTATTAGGCAGAATGCCTTCTGCTGTGGGTTATCAACCCACCCTTAGTACCGAAATGGGTTCTTTACAAGAAAGAATTACTTCGACCAAAGAAGGGTCTATAACTTCTATTCAAGCAGTTTATGTACCTGCAGACGATTTGACCGACCCTGCTCCTGCAACGACATTTGCACATTTAGATGCTACTACCGTACTATCGAGAGGATTAGCTGCCAAAGGTATCTATCCAGCAGTAGATCCTTTAGATTCAACGTCAACTATGCTCCAACCTCAGATCGTTGGTGAAGAACATTATGAAACTGCGCAAAGAGTTAAGCAAACTTTACAGCGTTACAAAGAACTTCAGGACATTATAGCCATCCTTGGGTTGGATGAATTATCCGAAGACGATCGCTTAACTGTAGCAAGAGCACGAAAAATTGAGCGTTTCTTATCGCAGCCTTTTTTCGTAGCAGAAGTATTTACTGGTTCGCCAGGGAAATATGTTGGTCTAGCAGAAACAATTAGAGGGTTTAATTTGATTCTTTCCGGAGAATTAGATGGTCTTCCCGAACAGGCCTTTTATTTGGTAGGTAACATCGATGAAGCTACTGCGAAGGCTACGAACTTAGAAATGGAGAGCAAATTGAAGAAATGA | 1497 | 0.4168 | MRINPTTSGPEVSALEKKNLGRIVQIIGPVLDVAFPPGKMPNIYNALVVKGRDTVGQQINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGSVSVFGRVGERTREGNDLYKEMKESGVINEQNIPESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNQQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERITSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEDDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGFNLILSGELDGLPEQAFYLVGNIDEATAKATNLEMESKLKK | 498 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bach2g00460 | 498 | PANTHER | ATP SYNTHASE | 17 | 496 | - | - | |
Bach2g00460 | 498 | ProSitePatterns | ATP synthase alpha and beta subunits signature. | 363 | 372 | IPR020003 | GO:0005524 | |
Bach2g00460 | 498 | Gene3D | - | 98 | 374 | IPR027417 | - | |
Bach2g00460 | 498 | SUPERFAMILY | C-terminal domain of alpha and beta subunits of F1 ATP synthase | 375 | 490 | - | - | |
Bach2g00460 | 498 | Gene3D | - | 375 | 498 | IPR024034 | - | |
Bach2g00460 | 498 | SMART | AAA_5 | 164 | 356 | IPR003593 | GO:0016887 | |
Bach2g00460 | 498 | FunFam | ATP synthase subunit beta | 79 | 424 | - | - | |
Bach2g00460 | 498 | Pfam | ATP synthase alpha/beta family, nucleotide-binding domain | 152 | 372 | IPR000194 | GO:0005524 | |
Bach2g00460 | 498 | Gene3D | - | 18 | 97 | - | - | |
Bach2g00460 | 498 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 99 | 377 | IPR027417 | - | |
Bach2g00460 | 498 | NCBIfam | F0F1 ATP synthase subunit beta | 20 | 490 | IPR005722 | GO:0015986|GO:0045261|GO:0046933 | |
Bach2g00460 | 498 | FunFam | ATP synthase subunit beta, chloroplastic | 18 | 97 | - | - | |
Bach2g00460 | 498 | Hamap | ATP synthase subunit beta [atpB]. | 18 | 490 | IPR005722 | GO:0015986|GO:0045261|GO:0046933 | |
Bach2g00460 | 498 | CDD | F1-ATPase_beta_CD | 99 | 377 | - | - | |
Bach2g00460 | 498 | Pfam | ATP synthase alpha/beta family, beta-barrel domain | 23 | 95 | IPR004100 | GO:0046034|GO:1902600 | |
Bach2g00460 | 498 | FunFam | ATP synthase subunit beta | 375 | 494 | - | - | |
Bach2g00460 | 498 | CDD | ATP-synt_F1_beta_C | 379 | 486 | - | - | |
Bach2g00460 | 498 | CDD | ATP-synt_F1_beta_N | 19 | 98 | - | - | |
Bach2g00460 | 498 | FunFam | ATP synthase subunit beta | 98 | 374 | - | - | |
Bach2g00460 | 498 | SUPERFAMILY | N-terminal domain of alpha and beta subunits of F1 ATP synthase | 19 | 97 | IPR036121 | GO:0046034|GO:1902600 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Bach2g00460 | Bach-Chr2 | 10038667 | 10040163 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Bach2g00460 | 94 | 429 | Primary Pumps ATPases(2) | AT1G20260 | 26.776 | 2.36e-27 | 113 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bach2g00460 | K02112 | - | qsa:O6P43_034900 | 941.799 |